Nucleotide Global Alignment
Description
- Query:
- TRCN0000491690
- Subject:
- XM_005257366.3
- Aligned Length:
- 2414
- Identities:
- 1221
- Gaps:
- 1179
Alignment
Query 1 ATGGCTGAGCCCCGCCAGGAGTTCGAAGTGATGGAAGATCACGCTGGGACGTACGGGTTGGGGGACAGGAAAGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCTGAGCCCCGCCAGGAGTTCGAAGTGATGGAAGATCACGCTGGGACGTACGGGTTGGGGGACAGGAAAGA 74
Query 75 TCAGGGGGGCTACACCATGCACCAAGACCAAGAGGGTGACACGGACGCTGGCCTGAAA---------------- 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TCAGGGGGGCTACACCATGCACCAAGACCAAGAGGGTGACACGGACGCTGGCCTGAAAGCTGAAGAAGCAGGCA 148
Query 133 --------------------------GAATCT------------------------------------------ 138
|||.||
Sbjct 149 TTGGAGACACCCCCAGCCTGGAAGACGAAGCTGCTGGTCACGTGACCCAAGAGGAGTTGAGAGTTCCGGGCCGG 222
Query 139 ---------------------CCCCTG----------------------------------------------- 144
||||||
Sbjct 223 CAGAGGAAGGCGCCTGAAAGGCCCCTGGCCAATGAGATTAGCGCCCACGTCCAGCCTGGACCCTGCGGAGAGGC 296
Query 145 --------------------------------------CAGA-------------------------------- 148
||||
Sbjct 297 CTCTGGGGTCTCTGGGCCGTGCCTCGGGGAGAAAGAGCCAGAAGCTCCCGTCCCGCTGACCGCGAGCCTTCCTC 370
Query 149 -------------------------------------------------------------------------- 148
Sbjct 371 AGCACCGTCCCGTTTGCCCAGCGCCTCCTCCAACAGGAGGCCCTCAGGAGCCCTCCCTGGAGTGGGGACAAAAA 444
Query 149 -------------------------------------------CCCCCACTG---------------------- 157
||.||||||
Sbjct 445 GGCGGGGACTGGGCCGAGAAGGGTCCGGCCTTTCCGAAGCCCGCCACCACTGCGTATCTCCACACAGAGCCTGA 518
Query 158 -----------------AGGA--------------------------CGGATCTGAGGAACC------------ 176
|||| |.|.||||||..|||
Sbjct 519 AAGTGGTAAGGTGGTCCAGGAAGGCTTCCTCCGAGAGCCAGGCCCCCCAGGTCTGAGCCACCAGCTCATGTCCG 592
Query 177 ---------GGGCT----------CTGA-----------------------AACCT-------------CTGA- 194
||||| |||| ||||| ||||
Sbjct 593 GCATGCCTGGGGCTCCCCTCCTGCCTGAGGGCCCCAGAGAGGCCACACGCCAACCTTCGGGGACAGGACCTGAG 666
Query 195 -------------------------------TGCT--------------------------------------- 198
||||
Sbjct 667 GACACAGAGGGCGGCCGCCACGCCCCTGAGCTGCTCAAGCACCAGCTTCTAGGAGACCTGCACCAGGAGGGGCC 740
Query 199 -----------------------AAGAG---------------------------------------------- 203
|||||
Sbjct 741 GCCGCTGAAGGGGGCAGGGGGCAAAGAGAGGCCGGGGAGCAAGGAGGAGGTGGATGAAGACCGCGACGTCGATG 814
Query 204 -----------------------CACTCCAA------------------------------------------- 211
|.||||||
Sbjct 815 AGTCCTCCCCCCAAGACTCCCCTCCCTCCAAGGCCTCCCCAGCCCAAGATGGGCGGCCTCCCCAGACAGCCGCC 888
Query 212 ----------------------------CAGCGGAAGCTG------------------------------AAG- 226
|||||||.|.|| |||
Sbjct 889 AGAGAAGCCACCAGCATCCCAGGCTTCCCAGCGGAGGGTGCCATCCCCCTCCCTGTGGATTTCCTCTCCAAAGT 962
Query 227 ----------------------------------------------------AA---GCAGGCAT-------TG 238
|| ||||| || ||
Sbjct 963 TTCCACAGAGATCCCAGCCTCAGAGCCCGACGGGCCCAGTGTAGGGCGGGCCAAAGGGCAGG-ATGCCCCCCTG 1035
Query 239 GAG---------------------ACACCC-------------------------------------------- 247
||| ||||||
Sbjct 1036 GAGTTCACGTTTCACGTGGAAATCACACCCAACGTGCAGAAGGAGCAGGCGCACTCGGAGGAGCATTTGGGAAG 1109
Query 248 ----------CCAG-----CCTGGA--------------------------------AGACGA----------- 263
|||| |||||| |||.||
Sbjct 1110 GGCTGCATTTCCAGGGGCCCCTGGAGAGGGGCCAGAGGCCCGGGGCCCCTCTTTGGGAGAGGACACAAAAGAGG 1183
Query 264 -------------------------------AGCTGCTG-----------------GTCA--CGTGACCC---- 283
.||||||| |||| ||.|.|||
Sbjct 1184 CTGACCTTCCAGAGCCCTCTGAAAAGCAGCCTGCTGCTGCTCCGCGGGGGAAGCCCGTCAGCCGGGTCCCTCAA 1257
Query 284 ----AAGCTCGCATGGTCAGTAAAAGCAAAGACGGGACTGGAAGCGATGACAAAAAAGC--------------- 338
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 CTCAAAGCTCGCATGGTCAGTAAAAGCAAAGACGGGACTGGAAGCGATGACAAAAAAGCCAAGACATCCACACG 1331
Query 339 -------------------------------------------------------------------------- 338
Sbjct 1332 TTCCTCTGCTAAAACCTTGAAAAATAGGCCTTGCCTTAGCCCCAAACACCCCACTCCTGGTAGCTCAGACCCTC 1405
Query 339 -------------------------------------------------------------------------- 338
Sbjct 1406 TGATCCAACCCTCCAGCCCTGCTGTGTGCCCAGAGCCACCTTCCTCTCCTAAATACGTCTCTTCTGTCACTTCC 1479
Query 339 -----------------------------------CAAGGGGGCTGATGGTAAAACGAAGATCGCCACACCGCG 377
|||||||||||||||||||||||||||||||||||||||
Sbjct 1480 CGAACTGGCAGTTCTGGAGCAAAGGAGATGAAACTCAAGGGGGCTGATGGTAAAACGAAGATCGCCACACCGCG 1553
Query 378 GGGAGCAGCCCCTCCAGGCCAGAAGGGCCAGGCCAACGCCACCAGGATTCCAGCAAAAACCCCGCCCGCTCCAA 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554 GGGAGCAGCCCCTCCAGGCCAGAAGGGCCAGGCCAACGCCACCAGGATTCCAGCAAAAACCCCGCCCGCTCCAA 1627
Query 452 AGACACCACCCAGCTCTGGTGAACCTCCAAAATCAGGGGATCGCAGCGGCTACAGCAGCCCCGGCTCCCCAGGC 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628 AGACACCACCCAGCTCTGGTGAACCTCCAAAATCAGGGGATCGCAGCGGCTACAGCAGCCCCGGCTCCCCAGGC 1701
Query 526 ACTCCCGGCAGCCGCTCCCGCACCCCGTCCCTTCCAACCCCACCCACCCGGGAGCCCAAGAAGGTGGCAGTGGT 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1702 ACTCCCGGCAGCCGCTCCCGCACCCCGTCCCTTCCAACCCCACCCACCCGGGAGCCCAAGAAGGTGGCAGTGGT 1775
Query 600 CCGTACTCCACCCAAGTCGCCGTCTTCCGCCAAGAGCCGCCTGCAGACAGCCCCCGTGCCCATGCCAGACCTGA 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1776 CCGTACTCCACCCAAGTCGCCGTCTTCCGCCAAGAGCCGCCTGCAGACAGCCCCCGTGCCCATGCCAGACCTGA 1849
Query 674 AGAATGTCAAGTCCAAGATCGGCTCCACTGAGAACCTGAAGCACCAGCCGGGAGGCGGGAAGGTGCAGATAATT 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1850 AGAATGTCAAGTCCAAGATCGGCTCCACTGAGAACCTGAAGCACCAGCCGGGAGGCGGGAAGGTGCAGATAATT 1923
Query 748 AATAAGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCAAAGGATAATATCAAACACGTCCCGGGAGG 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1924 AATAAGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCAAAGGATAATATCAAACACGTCCCGGGAGG 1997
Query 822 CGGCAGTGTGCAAATAGTCTACAAACCAGTTGACCTGAGCAAGGTGACCTCCAAGTGTGGCTCATTAGGCAACA 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1998 CGGCAGTGTGCAAATAGTCTACAAACCAGTTGACCTGAGCAAGGTGACCTCCAAGTGTGGCTCATTAGGCAACA 2071
Query 896 TCCATCATAAACCAGGAGGTGGCCAGGTGGAAGTAAAATCTGAGAAGCTTGACTTCAAGGACAGAGTCCAGTCG 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2072 TCCATCATAAACCAGGAGGTGGCCAGGTGGAAGTAAAATCTGAGAAGCTTGACTTCAAGGACAGAGTCCAGTCG 2145
Query 970 AAGATTGGGTCCCTGGACAATATCACCCACGTCCCTGGCGGAGGAAATAAAAAGATTGAAACCCACAAGCTGAC 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2146 AAGATTGGGTCCCTGGACAATATCACCCACGTCCCTGGCGGAGGAAATAAAAAGATTGAAACCCACAAGCTGAC 2219
Query 1044 CTTCCGCGAGAACGCCAAAGCCAAGACAGACCACGGGGCGGAGATCGTGTACAAGTCGCCAGTGGTGTCTGGGG 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2220 CTTCCGCGAGAACGCCAAAGCCAAGACAGACCACGGGGCGGAGATCGTGTACAAGTCGCCAGTGGTGTCTGGGG 2293
Query 1118 ACACGTCTCCATGGCATCTCAGCAATGTCTCCTCCACCGGCAGCATCGACATGGTAGACTCGCCCCAGCTCGCC 1191
|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2294 ACACGTCTCCACGGCATCTCAGCAATGTCTCCTCCACCGGCAGCATCGACATGGTAGACTCGCCCCAGCTCGCC 2367
Query 1192 ACGCTAGCTGACGAGGTGTCTGCCTCCCTGGCCAAGCAGGGTTTGG 1237
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2368 ACGCTAGCTGACGAGGTGTCTGCCTCCCTGGCCAAGCAGGGTTTG- 2412
