Nucleotide Global Alignment
Description
- Query:
- TRCN0000491704
- Subject:
- XM_017015618.1
- Aligned Length:
- 3631
- Identities:
- 2025
- Gaps:
- 1580
Alignment
Query 1 ATGGGAAAAGTTGGCGCCGGCGGCGGCTCCCAAGCCCGGCTGAGCGCGCTCCTCGCCGGCGCGGGGCTCTTGAT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CCTCTGCGCCCCGGGCGTCTGCGGCGGCGGCTCCTGCTGCCCCTCGCCGCACCCCAGCTCCGCTCCACGCTCGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CCTCGACCCCTAGGGGCTTTTCCCACCAGGGGCGGCCAGGCAGGGCTCCTGCCACGCCCCTGCCCCTCGTAGTG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CGTCCCCTGTTCTCAGTGGCCCCCGGGGACCGAGCGCTATCCCTGGAGCGGGCTCGGGGCACTGGGGCATCCAT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GGCGGTTGCTGCACGCTCCGGCCGGAGGAGACGGAGCGGAGCGGATCAGGAGAAGGCAGAACGGGGAGAGGGCG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CGAGTCGGAGCCCCCGGGGAGTGCTAAGAGATGGAGGGCAGCAGGAGCCTGGGACTCGGGAGCGGGACCCGGAC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 AAAGCCACCCGCTTCCGGATGGAGGAGCTGAGACTGACCAGCACCACGTTTGCGCTGACGGGAGACTCAGCACA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CAACCAAGCCATGGTCCACTGGTCTGGCCACAACAGCAGCGTGATTCTCATTTTGACAAAGCTCTATGACTATA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 ACCTGGGGAGCATCACAGAGAGCTCGCTTTGGAGGTCAACCGATTATGGAACAACCTATGAGAAGCTGAATGAT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 AAAGTTGGTTTGAAAACCATTTTGAGCTATCTCTATGTGTGTCCTACCAACAAGCGTAAGATAATGTTACTCAC 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 AGACCCGGAGATTGAGAGCAGTTTATTGATCAGCTCAGATGAAGGGGCAACTTATCAAAAGTACCGGCTGAACT 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 TCTACATTCAAAGCTTGCTTTTTCACCCCAAACAAGAAGACTGGATTCTGGCATACAGTCAAGACCAAAAGTTA 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 TACAGCTCTGCTGAATTTGGGAGAAGATGGCAGCTTATCCAAGAAGGGGTTGTACCAAACAGGTTCTACTGGTC 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 TGTGATGGGGTCAAATAAAGAACCAGACCTTGTGCATCTTGAGGCCAGAACTGTGGATGGTCATTCACATTATC 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 TAACTTGCCGAATGCAGAACTGTACAGAGGCCAACAGGAATCAGCCTTTTCCAGGCTACATTGACCCAGACTCT 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 TTGATTGTTCAGGATCATTATGTGTTTGTTCAGCTGACATCAGGAGGGCGGCCACATTACTACGTGTCCTACCG 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 AAGGAATGCATTTGCCCAAATGAAGCTTCCGAAATATGCTTTGCCCAAGGACATGCATGTTATCAGCACCGATG 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 AGAATCAGGTGTTCGCAGCGGTCCAAGAATGGAACCAGAATGACACGTACAACCTCTACATCTCAGACACACGT 1332
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1333 GGTGTCTACTTCACCCTGGCCTTGGAGAATGTCCAGAGCAGCAGAGGCCCTGAGGGCAACATCATGATCGACCT 1406
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1407 CTATGAGGTAGCAGGGATAAAGGGAATGTTCTTGGCTAACAAGAAGATTGACAACCAAGTGAAGACTTTCATCA 1480
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 -------------------------ATGTTCTTGGCTAACAAGAAGATTGACAACCAAGTGAAGACTTTCATCA 49
Query 1481 CATATAACAAAGGCAGAGACTGGCGTTTGCTGCAGGCGCCGGACACGGATCTAAGGGGGGACCCCGTGCACTGC 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 50 CATATAACAAAGGCAGAGACTGGCGTTTGCTGCAGGCGCCGGACACGGATCTAAGGGGGGACCCCGTGCACTGC 123
Query 1555 TTGCTGCCCTATTGCTCACTACACCTTCACCTGAAGGTCTCTGAGAATCCCTACACATCAGGGATCATTGCCAG 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 124 TTGCTGCCCTATTGCTCACTACACCTTCACCTGAAGGTCTCTGAGAATCCCTACACATCAGGGATCATTGCCAG 197
Query 1629 CAAAGACACAGCTCCAAGCATCATAGTGGCATCAGGTAATATAGGTTCTGAATTGTCAGACACTGACATCAGCA 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 198 CAAAGACACAGCTCCAAGCATCATAGTGGCATCAGGTAATATAGGTTCTGAATTGTCAGACACTGACATCAGCA 271
Query 1703 TGTTTGTCTCTTCAGATGCAGGGAACACCTGGAGACAGATCTTTGAAGAAGAGCACAGTGTTTTGTACCTGGAT 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 272 TGTTTGTCTCTTCAGATGCAGGGAACACCTGGAGACAGATCTTTGAAGAAGAGCACAGTGTTTTGTACCTGGAT 345
Query 1777 CAAGGTGGAGTCCTGGTTGCTATGAAACACACATCTCTCCCAATTCGACATCTTTGGTTGAGTTTTGATGAAGG 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 346 CAAGGTGGAGTCCTGGTTGCTATGAAACACACATCTCTCCCAATTCGACATCTTTGGTTGAGTTTTGATGAAGG 419
Query 1851 GAGATCTTGGAGCAAATACAGTTTCACATCTATTCCACTTTTTGTGGATGGGGTTCTGGGTGAGCCTGGAGAAG 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 GAGATCTTGGAGCAAATACAGTTTCACATCTATTCCACTTTTTGTGGATGGGGTTCTGGGTGAGCCTGGAGAAG 493
Query 1925 AGACTCTCATCATGACAGTGTTTGGACACTTCAGCCACCGCTCTGAATGGCAGCTGGTCAAAGTAGATTACAAG 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 494 AGACTCTCATCATGACAGTGTTTGGACACTTCAGCCACCGCTCTGAATGGCAGCTGGTCAAAGTAGATTACAAG 567
Query 1999 TCCATTTTTGATAGACGGTGTGCCGAAGAGGACTACAGACCTTGGCAGCTGCACAGCCAGGGGGAAGCATGTAT 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 568 TCCATTTTTGATAGACGGTGTGCCGAAGAGGACTACAGACCTTGGCAGCTGCACAGCCAGGGGGAAGCATGTAT 641
Query 2073 CATGGGAGCAAAAAGGATATATAAGAAGCGAAAATCAGAGCGGAAGTGTATGCAAGGAAAATATGCAGGAGCTA 2146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 642 CATGGGAGCAAAAAGGATATATAAGAAGCGAAAATCAGAGCGGAAGTGTATGCAAGGAAAATATGCAGGAGCTA 715
Query 2147 TGGAATCTGAACCCTGTGTCTGCACTGAGGCTGATTTTGATTGCGACTATGGTTATGAGCGACACAGCAATGGC 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 716 TGGAATCTGAACCCTGTGTCTGCACTGAGGCTGATTTTGATTGCGACTATGGTTATGAGCGACACAGCAATGGC 789
Query 2221 CAGTGCCTGCCGGCATTTTGGTTCAATCCATCCTCTCTGTCAAAGGATTGCAGCTTGGGACAGAGTTACCTCAA 2294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 790 CAGTGCCTGCCGGCATTTTGGTTCAATCCATCCTCTCTGTCAAAGGATTGCAGCTTGGGACAGAGTTACCTCAA 863
Query 2295 TAGTACTGGGTACAGGAAGGTGGTTTCCAATAATTGCACTGATGGCGTAAGGGAACAGTACACTGCCAAACCGC 2368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 864 TAGTACTGGGTACAGGAAGGTGGTTTCCAATAATTGCACTGATGGCGTAAGGGAACAGTACACTGCCAAACCGC 937
Query 2369 AGAAGTGCCCAGGGAAAGCCCCGCGGGGGCTGCGGATAGTCACGGCTGATGGAAAGCTGACAGCGGAACAAGGA 2442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 938 AGAAGTGCCCAGGGAAAGCCCCGCGGGGGCTGCGGATAGTCACGGCTGATGGAAAGCTGACAGCGGAACAAGGA 1011
Query 2443 CACAACGTCACTCTCATGGTGCAATTAGAAGAGGGTGATGTTCAGCGGACACTCATCCAAGTGGACTTTGGCGA 2516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1012 CACAACGTCACTCTCATGGTGCAATTAGAAGAGGGTGATGTTCAGCGGACACTCATCCAAGTGGACTTTGGCGA 1085
Query 2517 TGGTATCGCGGTGTCTTACGTCAATCTCAGCTCCATGGAAGATGGGATCAAACACGTCTATCAGAACGTGGGCA 2590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1086 TGGTATCGCGGTGTCTTACGTCAATCTCAGCTCCATGGAAGATGGGATCAAACACGTCTATCAGAACGTGGGCA 1159
Query 2591 TTTTCCGTGTGACCGTGCAGGTGGACAACAGTCTGGGTTCTGACAGCGCCGTCCTGTACTTACATGTAACTTGT 2664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1160 TTTTCCGTGTGACCGTGCAGGTGGACAACAGTCTGGGTTCTGACAGCGCCGTCCTGTACTTACATGTAACTTGT 1233
Query 2665 CCCTTGGAGCACGTGCACCTGTCTCTTCCCTTTGTCACCACAAAGAACAAAGAGGTCAATGCGACGGCAGTGCT 2738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1234 CCCTTGGAGCACGTGCACCTGTCTCTTCCCTTTGTCACCACAAAGAACAAAGAGGTCAATGCGACGGCAGTGCT 1307
Query 2739 GTGGCCCAGCCAAGTGGGCACCCTCACTTATGTGTGGTGGTACGGAAACAACACGGAGCCTTTGATCACCTTGG 2812
||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1308 GTGGCCCAGCCAAGTGGGCACCCTCACTTACGTGTGGTGGTACGGAAACAACACGGAGCCTTTGATCACCTTGG 1381
Query 2813 AGGGAAGCATATCCTTCAGATTTACTTCAGAAGGAATGAATACCATCACAGTGCAGGTCTCAGCTGGGAATGCC 2886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1382 AGGGAAGCATATCCTTCAGATTTACTTCAGAAGGAATGAATACCATCACAGTGCAGGTCTCAGCTGGGAATGCC 1455
Query 2887 ATCCTACAAGACACAAAGACCATCGCAGTATATGAGGAATTCCGGTCTCTTCGCTTGTCCTTTTCTCCAAACCT 2960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1456 ATCCTACAAGACACAAAGACCATCGCAGTATATGAGGAATTCCGGTCTCTTCGCTTGTCCTTTTCTCCAAACCT 1529
Query 2961 GGATGACTACAACCCGGACATCCCTGAGTGGAGGAGGGACATCGGTCGAGTCATCAAAAAATCCCTGGTGGAAG 3034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1530 GGATGACTACAACCCGGACATCCCTGAGTGGAGGAGGGACATCGGTCGAGTCATCAAAAAATCCCTGGTGGAAG 1603
Query 3035 CCACAGGGGTTCCAGGCCAGCACATCCTGGTGGCGGTGCTCCCTGGCTTACCCACCACTGCTGAACTCTTTGTC 3108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1604 CCACAGGGGTTCCAGGCCAGCACATCCTGGTGGCGGTGCTCCCTGGCTTACCCACCACTGCTGAACTCTTTGTC 1677
Query 3109 CTACCCTATCAGGATCCAGCTGGAGAAAACAAAAGGTCAACTGATGACCTGGAGCAGATATCAGAATTGCTGAT 3182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1678 CTACCCTATCAGGATCCAGCTGGAGAAAACAAAAGGTCAACTGATGACCTGGAGCAGATATCAGAATTGCTGAT 1751
Query 3183 CCACACGCTCAACCAAAACTCAGTACACTTCGAGCTGAAGCCAGGAGTCCGAGTCCTTGTCCATGCTGCTCACT 3256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1752 CCACACGCTCAACCAAAACTCAGTACACTTCGAGCTGAAGCCAGGAGTCCGAGTCCTTGTCCATGCTGCTCACT 1825
Query 3257 TAACAGCGGCCCCCCTGGTGGACCTCACTCCAACCCACAGTGGATCTGCCATGCTGATGCTGCTCTCAGTGGTG 3330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1826 TAACAGCGGCCCCCCTGGTGGACCTCACTCCAACCCACAGTGGATCTGCCATGCTGATGCTGCTCTCAGTGGTG 1899
Query 3331 TTTGTGGGGCTGGCAGTGTTCGTCATCTACAAGTTTAAAAGGA----------GAGTA--GCTTTA--CCC--- 3387
||||||||||||||||||||||||||||||||||||||||||| ||.|| | |||| |||
Sbjct 1900 TTTGTGGGGCTGGCAGTGTTCGTCATCTACAAGTTTAAAAGGAAGATCCCGGGGATTAATG-TTTATGCCCAGA 1972
Query 3388 -------------------------------TCCCCTCCCTC----------------------CCCTTCTACT 3408
|||..||..|| ||||...|||
Sbjct 1973 TGCAGAATGAGAAAGAACAAGAGATGATCAGTCCAGTCAGTCACTCTGAAAGCAGGCCCAATGTCCCTCAGACT 2046
Query 3409 CAA---------CCTGG------------TGA-----------CTCATCTCTCCGA--TTGCAAAGAGCAAGAC 3448
.|| ||||| ||| |.||.|||...|| ||.||||.|||||
Sbjct 2047 GAACTAAGGAGGCCTGGCCAGCTTATAGATGAGAAGGTGGAATCCCAGCTCATAGAAGTTCCAAACAGCAA--- 2117
Query 3449 ACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGCA----------------CA-GTATGCAATT- 3504
|.||.|..|| ||.|||| |||| .|||| || |.||.|||.|
Sbjct 2118 -----------CTTTGAGAGC---AGTGGGG---TGCT-TGGCAGCTGTTCTGTGTTTTCCAGGAATCCAACTG 2173
Query 3505 ----- 3504
Sbjct 2174 AGCAT 2178
