Nucleotide Global Alignment

Description

Query:
TRCN0000491739
Subject:
NM_001287135.2
Aligned Length:
1420
Identities:
1326
Gaps:
80

Alignment

Query    1  ------------------------------------AT--GCACG--------GTT-------ACTTTG-----  16
                                                ||  |||.|        |||       ||||||     
Sbjct    1  ATGTGTGACCTCATTGAGCCGCAGCCGGCCGAGAAGATCGGCAAGATGAAGAAGTTGCGGAGAACTTTGTCGGA  74

Query   17  --------GCTGCAATGCTGCTGCAGAGCCCGGTTACTCTGCCTTCG-TGGGAACTCCACAGATATGTGTCACA  81
                    |..|||.|||| .||.|||  ..|.|.||.|..||||.| ||          ||||||||||||||
Sbjct   75  GAGTTTCAGTCGCATTGCT-TTGAAGA--AAGATGACACCACCTTTGATG----------AGATATGTGTCACA  135

Query   82  AAGATGTCTACACGGAACTGCCAGGGAATGGACTCAGTGATCAAACCCCTGGACACAATTCCTGAGGATAAAAA  155
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  136  AAGATGTCTACACGGAACTGCCAGGGAATGGACTCAGTGATCAAACCCCTGGACACAATTCCTGAGGATAAAAA  209

Query  156  AGTCAGAGTTCAGAGGACACAGAGCACTTTTGACCCATTTGAGAAACCAGCTAATCAAGTAAAGAGGGTGCATT  229
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  210  AGTCAGAGTTCAGAGGACACAGAGCACTTTTGACCCATTTGAGAAACCAGCTAATCAAGTAAAGAGGGTGCATT  283

Query  230  CTGAGAACAATGCTTGCATTAACTTTAAGACCTCCTCCACTGGCAAAGAGTCACCTAAAGTTAGGCGGCACTCC  303
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  284  CTGAGAACAATGCTTGCATTAACTTTAAGACCTCCTCCACTGGCAAAGAGTCACCTAAAGTTAGGCGGCACTCC  357

Query  304  AGCCCCAGCTCGCCAACAAGTCCCAAATTTGGAAAAGCTGACTCATATGAAAAGCTGGAAAAACTAGGGGAAGG  377
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  358  AGCCCCAGCTCGCCAACAAGTCCCAAATTTGGAAAAGCTGACTCATATGAAAAGCTGGAAAAACTAGGGGAAGG  431

Query  378  ATCTTATGCTACAGTATACAAAGGGAAAAGCAAGGTAAATGGGAAGTTGGTAGCTCTGAAGGTGATCAGGCTGC  451
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  432  ATCTTATGCTACAGTATACAAAGGGAAAAGCAAGGTAAATGGGAAGTTGGTAGCTCTGAAGGTGATCAGGCTGC  505

Query  452  AGGAAGAAGAAGGGACACCTTTCACAGCTATCAGGGAAGCTTCTCTTTTAAAAGGACTAAAACATGCTAACATA  525
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  506  AGGAAGAAGAAGGGACACCTTTCACAGCTATCAGGGAAGCTTCTCTTTTAAAAGGACTAAAACATGCTAACATA  579

Query  526  GTGCTACTTCATGACATCATCCATACCAAGGAGACGCTGACACTTGTGTTTGAATATGTGCACACTGATTTATG  599
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  580  GTGCTACTTCATGACATCATCCATACCAAGGAGACGCTGACACTTGTGTTTGAATATGTGCACACTGATTTATG  653

Query  600  TCAGTACATGGACAAGCACCCTGGGGGGCTGCATCCAGATAATGTGAAGTTGTTTTTATTTCAGTTGCTGCGAG  673
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  654  TCAGTACATGGACAAGCACCCTGGGGGGCTGCATCCAGATAATGTGAAGTTGTTTTTATTTCAGTTGCTGCGAG  727

Query  674  GTCTGTCTTACATCCACCAGCGTTATATTTTGCACAGAGACCTGAAACCACAGAACCTTCTGATCAGTGACACG  747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  728  GTCTGTCTTACATCCACCAGCGTTATATTTTGCACAGAGACCTGAAACCACAGAACCTTCTGATCAGTGACACG  801

Query  748  GGGGAGTTAAAGCTGGCAGATTTCGGTCTTGCAAGAGCAAAATCCGTCCCTAGCCACACATACTCCAACGAAGT  821
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  802  GGGGAGTTAAAGCTGGCAGATTTCGGTCTTGCAAGAGCAAAATCCGTCCCTAGCCACACATACTCCAACGAAGT  875

Query  822  GGTTACCTTGTGGTACAGACCTCCAGATGTCCTTCTAGGCTCAACAGAATATTCCACCTGCCTTGACATGTGGG  895
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  876  GGTTACCTTGTGGTACAGACCTCCAGATGTCCTTCTAGGCTCAACAGAATATTCCACCTGCCTTGACATGTGGG  949

Query  896  GAGTAGGTTGCATCTTTGTTGAAATGATCCAAGGAGTTGCTGCTTTTCCAGGAATGAAAGACATTCAGGATCAA  969
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  950  GAGTAGGTTGCATCTTTGTTGAAATGATCCAAGGAGTTGCTGCTTTTCCAGGAATGAAAGACATTCAGGATCAA  1023

Query  970  CTTGAACGAATATTTCTGGTTCTTGGAACACCAAATGAGGACACATGGCCTGGAGTTCATTCTTTACCACATTT  1043
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1024  CTTGAACGAATATTTCTGGTTCTTGGAACACCAAATGAGGACACATGGCCTGGAGTTCATTCTTTACCACATTT  1097

Query 1044  TAAGCCAGAACGCTTTACCCTGTACAGCTCTAAAAACCTTAGACAAGCATGGAATAAGCTCAGCTATGTGAACC  1117
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1098  TAAGCCAGAACGCTTTACCCTGTACAGCTCTAAAAACCTTAGACAAGCATGGAATAAGCTCAGCTATGTGAACC  1171

Query 1118  ATGCAGAGGACCTGGCCTCCAAGCTCCTACAATGTTCCCCAAAGAACAGACTGTCGGCACAGGCTGCCTTGAGC  1191
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1172  ATGCAGAGGACCTGGCCTCCAAGCTCCTACAATGTTCCCCAAAGAACAGACTGTCGGCACAGGCTGCCTTGAGC  1245

Query 1192  CACGAGTATTTTAGTGACCTGCCGCCACGGCTATGGGAACTCACCGACATGTCTTCTATTTTTACTGTCCCAAA  1265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1246  CACGAGTATTTTAGTGACCTGCCGCCACGGCTATGGGAACTCACCGACATGTCTTCTATTTTTACTGTCCCAAA  1319

Query 1266  TGTGAGATTGCAACCAGAAGCTGGAGAAAGCATGCGGGCCTTTGGGAAAAACAATAGTTATGGCAAAAGTCTAT  1339
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1320  TGTGAGATTGCAACCAGAAGCTGGAGAAAGCATGCGGGCCTTTGGGAAAAACAATAGTTATGGCAAAAGTCTAT  1393

Query 1340  CAAACAGCAAGCAC  1353
            ||||||||||||||
Sbjct 1394  CAAACAGCAAGCAC  1407

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