Nucleotide Global Alignment

Description

Query:
TRCN0000491781
Subject:
XM_006495692.3
Aligned Length:
3924
Identities:
1665
Gaps:
2065

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAAGCTGGCGACGGGACTCTGGGTCTGGGGGAGCCTTCTGATGGCAGCGGGGACCGTCCAGCCCAGCGCTTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCAGTCAGTGTGCGCAGGAACAGAGAACAAACTGAGCTCTCTCTCTGACCTGGAACAGCAGTACCGAGCCTTGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCAAATACTATGAAAACTGCGAGGTAGTCATGGGCAACCTGGAGATCACCAGCATCGAGCACAACCGGGACCTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCCTTCCTGCGGTCTATCCGAGAAGTCACAGGCTACGTCCTGGTGGCCCTCAACCAGTTTCGTTACTTGCCTCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGAGAATTTACGCATTATTCGTGGGACAAAACTATATGAAGATCGCTATGCCTTAGCGATATTCTTAAACTACA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGAAAGATGGCAACTTTGGACTCCAAGAACTTGGATTAAAGAACCTGACCGAAATACTAAATGGTGGAGTCTAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTAGACCAGAACAAATTCCTATGTTATGCTGACACTATACACTGGCAAGATATTGTTCGGAATCCATGGCCTTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CAACATGACTCTGGTGTCAACAAATGGAAGTTCTGGATGTGGAAGATGCCATAAGTCTTGCACTGGCCGATGCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGGGACCCACAGAAAATCACTGCCAGACCTTGACCAGAACTGTGTGTGCTGAACAATGTGATGGCAGGTGCTAT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGACCCTACGTTAGTGACTGCTGCCATCGAGAATGTGCTGGAGGCTGCTCAGGACCAAAGGACACTGACTGCTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TGCCTGCATGAACTTCAATGACAGTGGAGCCTGCGTTACTCAATGTCCCCAAACATTTGTCTACAATCCAACCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CCTTTCAACTGGAACACAACTTCAATGCAAAGTACACGTATGGAGCATTCTGTGTTAAGAAATGTCCACATAAC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTCGTGGTAGATTCCAGTTCTTGTGTACGAGCCTGCCCTAGTTCTAAGATGGAAGTAGAAGAAAATGGGATTAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AATGTGTAAGCCTTGCACCGATATTTGCCCCAAAGCATGTGATGGAATCGGCACGGGATCACTGATGTCTGCTC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGACTGTGGATTCAAGTAACATTGACAAATTCATAAACTGCACAAAGATCAATGGCAATCTCATCTTTCTTGTC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ACTGGCATTCATGGAGACCCTTACAATGCTATTGACGCCATAGATCCAGAGAAACTGAATGTCTTTCGGACTGT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CAGAGAAATAACAGGTTTCCTGAACATACAGTCTTGGCCCCCAAATATGACAGATTTCAGTGTTTTCTCCAACC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TCGTCACAATTGGAGGAAGAGTCCTCTACAGTGGTCTCTCATTGCTGATCCTCAAACAACAAGGTATCACTTCC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CTACAGTTCCAGTCTCTGAAGGAAATCAGTGCGGGCAATATCTACATCACTGACAACAGCAACCTGTGTTATTA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CCATACCATTAACTGGACAACACTCTTCAGCACCATTAACCAGAGAATAGTGATCCGAGATAACAGAAGAGCTG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AGAATTGTACTGCTGAAGGCATGGTATGCAACCACCTGTGTTCAAATGATGGTTGTTGGGGACCTGGGCCGGAC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CAGTGCCTGTCATGTCGGCGCTTCAGCAGGGGAAAGATCTGCATAGAGTCTTGCAACCTTTATGATGGGGAATT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TCGAGAGTTTGAAAACGGCTCCATCTGTGTTGAGTGTGACTCCCAGTGTGAGAAAATGGAAGATGGACTCCTCA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CATGCCATGGACCGGGACCTGACAACTGCACAAAGTGCTCTCATTTTAAGGATGGTCCAAACTGTGTGGAGAAA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TGTCCAGATGGCCTACAGGGAGCAAACAGTTTCATTTTTAAGTATGCAGATCAGGATCGGGAGTGCCACCCTTG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CCATCCAAACTGCACCCAGGGGTGTAACGGTCCCACTAGTCATGACTGCATTTACTACCCATGGACGGGCCATT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CCACTTTACCACAACACGCTAGAACTCCACTGATTGCAGCCGGAGTCATTGGAGGCCTCTTCATCCTGGTGATC  1998

Query    1  -------------------------------------------------------------------TCTTGGA  7
                                                                               ||.||||
Sbjct 1999  ATGGCTTTGACATTTGCTGTCTATGTCAGAAGAAAGAGCATCAAAAAGAAACGTGCTTTGAGGAGATTCCTGGA  2072

Query    8  AACAGAGTTGGTGGAACCATTAACTCCCAGTGGCACAGCACCCAATCAAGCTCAACTTCGTATTTTGAAAGAAA  81
            .||||||.||||.||.||.|||||||||||||||||.|||||||||||||||||||||||.||||||||.||||
Sbjct 2073  GACAGAGCTGGTAGAGCCCTTAACTCCCAGTGGCACGGCACCCAATCAAGCTCAACTTCGCATTTTGAAGGAAA  2146

Query   82  CTGAGCTGAAGAGGGTAAAAGTCCTTGGCTCAGGTGCTTTTGGAACGGTTTATAAAGGTATTTGGGTACCTGAA  155
            |.||.||.|||||||||||.|||||||||||.||.|||||||||||.||||||||||||||||||||.||||||
Sbjct 2147  CCGAACTAAAGAGGGTAAAGGTCCTTGGCTCGGGAGCTTTTGGAACCGTTTATAAAGGTATTTGGGTGCCTGAA  2220

Query  156  GGAGAAACTGTGAAGATTCCTGTGGCTATTAAGATTCTTAATGAGACAACTGGTCCCAAGGCAAATGTGGAGTT  229
            ||.|||||.|||||.||.|||||||||||.|||||.||.|||||.||||||||.|||||.||.||.||||||||
Sbjct 2221  GGTGAAACAGTGAAAATCCCTGTGGCTATAAAGATCCTCAATGAAACAACTGGCCCCAAAGCCAACGTGGAGTT  2294

Query  230  CATGGATGAAGCTCTGATCATGGCAAGTATGGATCATCCACACCTAGTCCGGTTGCTGGGTGTGTGTCTGAGCC  303
            |||||||||.||||||||||||||||||||||||||.|||||||||||.||..|..||||.|||||||||||.|
Sbjct 2295  CATGGATGAGGCTCTGATCATGGCAAGTATGGATCACCCACACCTAGTTCGCCTATTGGGAGTGTGTCTGAGTC  2368

Query  304  CAACCATCCAGCTGGTTACTCAACTTATGCCCCATGGCTGCCTGTTGGAGTATGTCCACGAGCACAAGGATAAC  377
            |.||.||||||.|||||||.||.||.|||||.|||||||||||..||||.|||||.||.||.||||||||||||
Sbjct 2369  CCACTATCCAGTTGGTTACGCAGCTGATGCCGCATGGCTGCCTACTGGACTATGTTCATGAACACAAGGATAAC  2442

Query  378  ATTGGATCACAACTGCTGCTTAACTGGTGTGTCCAGATAGCTAAGGGAATGATGTACCTGGAAGAAAGACGACT  451
            |||||||||||.||||||.|.|||||||||||||||||.||||||||||||||||||||.|||||||||||.||
Sbjct 2443  ATTGGATCACAGCTGCTGTTGAACTGGTGTGTCCAGATTGCTAAGGGAATGATGTACCTAGAAGAAAGACGGCT  2516

Query  452  CGTTCATCGGGATTTGGCAGCCCGTAATGTCTTAGTGAAATCTCCAAACCATGTGAAAATCACAGATTTTGGGC  525
            .||||||||||||.||||||||||.|||||||||||||||||||||||.|||||.|||||||||||||||||.|
Sbjct 2517  TGTTCATCGGGATCTGGCAGCCCGCAATGTCTTAGTGAAATCTCCAAATCATGTTAAAATCACAGATTTTGGAC  2590

Query  526  TAGCCAGACTCTTGGAAGGAGATGAAAAAGAGTACAATGCTGATGGAGGAAAGATGCCAATTAAATGGATGGCT  599
            |.|||.|.|||||||||||||||||||||||.||||||||||||||.||.||||||||||||||||||||||||
Sbjct 2591  TGGCCCGGCTCTTGGAAGGAGATGAAAAAGAATACAATGCTGATGGTGGCAAGATGCCAATTAAATGGATGGCT  2664

Query  600  CTGGAGTGTATACATTACAGGAAATTCACCCATCAGAGTGACGTTTGGAGCTATGGAGTTACTATATGGGAACT  673
            |||||.|||||||||||.|||||||||||.|||||.|||||.||||||||||||||.||.||||||||||||||
Sbjct 2665  CTGGAATGTATACATTATAGGAAATTCACACATCAAAGTGATGTTTGGAGCTATGGCGTCACTATATGGGAACT  2738

Query  674  GATGACCTTTGGAGGAAAACCCTATGATGGAATTCCAACGCGAGAAATCCCTGATTTATTAGAGAAAGGAGAAC  747
            ||||||||||||||||||.||||||||||||||||||||.|||||||||||.||||||.|.|||||||||||.|
Sbjct 2739  GATGACCTTTGGAGGAAAGCCCTATGATGGAATTCCAACCCGAGAAATCCCCGATTTACTGGAGAAAGGAGAGC  2812

Query  748  GTTTGCCTCAGCCTCCCATCTGCACTATTGACGTTTACATGGTCATGGTCAAATGTTGGATGATTGATGCTGAC  821
            ||.||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||
Sbjct 2813  GTCTGCCTCAGCCTCCCATCTGCACTATTGATGTTTACATGGTCATGGTCAAATGTTGGATGATCGATGCTGAC  2886

Query  822  AGTAGACCTAAATTTAAGGAACTGGCTGCTGAGTTTTCAAGGATGGCTCGAGACCCTCAAAGATACCTAGTTAT  895
            ||.|||||||||||.||.|||||||||||||||||||||||.||||||.|||||||||||||||||||||||||
Sbjct 2887  AGCAGACCTAAATTCAAAGAACTGGCTGCTGAGTTTTCAAGAATGGCTAGAGACCCTCAAAGATACCTAGTTAT  2960

Query  896  TCAGGGTGATGATCGTATGAAGCTTCCCAGTCCAAATGACAGCAAGTTCTTTCAGAATCTCTTGGATGAAGAGG  969
            |||||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||||||||||||||||
Sbjct 2961  TCAGGGTGATGATCGTATGAAGCTTCCCAGTCCAAATGACAGCAAATTCTTCCAGAATCTCTTGGATGAAGAGG  3034

Query  970  ATTTGGAAGATATGATGGATGCTGAGGAGTACTTGGTCCCTCAGGCTTTCAACATCCCACCTCCCATCTATACT  1043
            ||||||||||.|||||||||||||||||.||.||||||||.||||||||||||||.||.|||||||||||.||.
Sbjct 3035  ATTTGGAAGACATGATGGATGCTGAGGAATATTTGGTCCCCCAGGCTTTCAACATACCTCCTCCCATCTACACA  3108

Query 1044  TCCAGAGCAAGAATTGACTCGAATAGGAGTGAAATTGGACACAGCCCTCCTCCTGCCTACACCCCCATGTCAGG  1117
            ||||||.|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 3109  TCCAGAACAAGAATTGACTCCAATAGGAGTGAAATTGGACACAGCCCTCCTCCTGCCTACACCCCCATGTCGGG  3182

Query 1118  AAACCAGTTTGTGTACCGAGATGGAGGTTTTGCTGCTGAACAAGGAGTGTCTGTGCCCTACAGAGCCCCAACTA  1191
            |||.|||||||||||||.||||||.||.||||||.|..||||||||.||.|..||||||||||||||.||||.|
Sbjct 3183  AAATCAGTTTGTGTACCAAGATGGGGGCTTTGCTACACAACAAGGAATGCCCATGCCCTACAGAGCCACAACCA  3256

Query 1192  GCACAATTCCAGAAGCTCCTGTGGCACAGGGTGCTACTGCTGAGATTTTTGATGACTCCTGCTGTAATGGCACC  1265
            ||||.||.|||||.|||||.||.||.||||||||.||.||||||||.|||||||||||||||||||||||.|||
Sbjct 3257  GCACCATACCAGAGGCTCCAGTAGCTCAGGGTGCAACGGCTGAGATGTTTGATGACTCCTGCTGTAATGGTACC  3330

Query 1266  CTACGCAAGCCAGTGGCACCCCATGTCCAAGAGGACAGTAGCACCCAGAGGTACAGTGCTGACCCCACCGTGTT  1339
            |||||.||||||||||||||||||||||||||||||||||||||.||||||||.||||||||.|||||.|||||
Sbjct 3331  CTACGAAAGCCAGTGGCACCCCATGTCCAAGAGGACAGTAGCACTCAGAGGTATAGTGCTGATCCCACAGTGTT  3404

Query 1340  TGCCCCAGAACGGAGCCCACGAGGAGAGCTGGATGAGGAAGGTTACATGACTCCTATGCGAGACAAACCCAAAC  1413
            .|||||||||||||..||.||||||||.||||||||.|||||.|||||||||||.||||..|||||.|||||||
Sbjct 3405  CGCCCCAGAACGGAATCCTCGAGGAGAACTGGATGAAGAAGGCTACATGACTCCAATGCATGACAAGCCCAAAC  3478

Query 1414  AAGAATACCTGAATCCAGTGGAGGAGAACCCTTTTGTTTCTCGGAGAAAAAATGGAGACCTTCAAGCATTGGAT  1487
            |||||||.||||||||.|||||.||||||||||||||.||.||.||.||.||||||||.||||||||.||.|||
Sbjct 3479  AAGAATATCTGAATCCTGTGGAAGAGAACCCTTTTGTGTCCCGAAGGAAGAATGGAGATCTTCAAGCTTTAGAT  3552

Query 1488  AATCCCGAATATCACAATGCATCCAATGGTCCACCCAAGGCCGAGGATGAGTATGTGAATGAGCCACTGTACCT  1561
            |||||.||.|||||||.|||.||||..||||||||||||||.||||||||.||.|||||||||||.||.|||||
Sbjct 3553  AATCCGGAGTATCACAGTGCTTCCAGCGGTCCACCCAAGGCGGAGGATGAATACGTGAATGAGCCTCTATACCT  3626

Query 1562  CAACACCTTTGCCAACACCTTGGGAAAAGCTGAGTACCTGAAGAACAACATACTGTCAATGCCAGAGAAGGCCA  1635
            |||||||||.|||||..|||||||.|..||.||||||.||||.||||...|||||||..||||||||||.||||
Sbjct 3627  CAACACCTTCGCCAATGCCTTGGGGAGTGCAGAGTACATGAAAAACAGTGTACTGTCTGTGCCAGAGAAAGCCA  3700

Query 1636  AGAAAGCGTTTGACAACCCTGACTACTGGAACCACAGCCTGCCACCTCGGAGCACCCTTCAGCACCCAGACTAC  1709
            |||||||.|||||||||||.||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 3701  AGAAAGCATTTGACAACCCCGACTACTGGAACCACAGCCTGCCACCCCGGAGCACCCTTCAGCACCCAGACTAC  3774

Query 1710  CTGCAGGAGTACAGCACAAAATATTTTTATAAACAGAATGGGCGGATCCGGCCTATTGTGGCAGAGAATCCTGA  1783
            ||||||||.||||||||||||||||||||||||||||||||.||||||||.||.||||||||||||||||||||
Sbjct 3775  CTGCAGGAATACAGCACAAAATATTTTTATAAACAGAATGGACGGATCCGCCCCATTGTGGCAGAGAATCCTGA  3848

Query 1784  ATACCTCTCTGAGTTCTCCCTGAAGCCAGGCACTGTGCTGCCGCCTCCACCTTACAGACACCGGAATACTGTGG  1857
            .||||||||.||||||||.||||||||.||||||.|||||||.|||||.||.||||||||||||||||||||||
Sbjct 3849  GTACCTCTCGGAGTTCTCGCTGAAGCCTGGCACTATGCTGCCCCCTCCGCCCTACAGACACCGGAATACTGTGG  3922

Query 1858  TG  1859
            ||
Sbjct 3923  TG  3924

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