Nucleotide Global Alignment
Description
- Query:
- TRCN0000491781
- Subject:
- XM_006495692.3
- Aligned Length:
- 3924
- Identities:
- 1665
- Gaps:
- 2065
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGCTGGCGACGGGACTCTGGGTCTGGGGGAGCCTTCTGATGGCAGCGGGGACCGTCCAGCCCAGCGCTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCAGTCAGTGTGCGCAGGAACAGAGAACAAACTGAGCTCTCTCTCTGACCTGGAACAGCAGTACCGAGCCTTGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAAATACTATGAAAACTGCGAGGTAGTCATGGGCAACCTGGAGATCACCAGCATCGAGCACAACCGGGACCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCTTCCTGCGGTCTATCCGAGAAGTCACAGGCTACGTCCTGGTGGCCCTCAACCAGTTTCGTTACTTGCCTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGAGAATTTACGCATTATTCGTGGGACAAAACTATATGAAGATCGCTATGCCTTAGCGATATTCTTAAACTACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGAAAGATGGCAACTTTGGACTCCAAGAACTTGGATTAAAGAACCTGACCGAAATACTAAATGGTGGAGTCTAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTAGACCAGAACAAATTCCTATGTTATGCTGACACTATACACTGGCAAGATATTGTTCGGAATCCATGGCCTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAACATGACTCTGGTGTCAACAAATGGAAGTTCTGGATGTGGAAGATGCCATAAGTCTTGCACTGGCCGATGCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGGACCCACAGAAAATCACTGCCAGACCTTGACCAGAACTGTGTGTGCTGAACAATGTGATGGCAGGTGCTAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGACCCTACGTTAGTGACTGCTGCCATCGAGAATGTGCTGGAGGCTGCTCAGGACCAAAGGACACTGACTGCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCCTGCATGAACTTCAATGACAGTGGAGCCTGCGTTACTCAATGTCCCCAAACATTTGTCTACAATCCAACCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTTTCAACTGGAACACAACTTCAATGCAAAGTACACGTATGGAGCATTCTGTGTTAAGAAATGTCCACATAAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTCGTGGTAGATTCCAGTTCTTGTGTACGAGCCTGCCCTAGTTCTAAGATGGAAGTAGAAGAAAATGGGATTAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AATGTGTAAGCCTTGCACCGATATTTGCCCCAAAGCATGTGATGGAATCGGCACGGGATCACTGATGTCTGCTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGACTGTGGATTCAAGTAACATTGACAAATTCATAAACTGCACAAAGATCAATGGCAATCTCATCTTTCTTGTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACTGGCATTCATGGAGACCCTTACAATGCTATTGACGCCATAGATCCAGAGAAACTGAATGTCTTTCGGACTGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAGAGAAATAACAGGTTTCCTGAACATACAGTCTTGGCCCCCAAATATGACAGATTTCAGTGTTTTCTCCAACC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCGTCACAATTGGAGGAAGAGTCCTCTACAGTGGTCTCTCATTGCTGATCCTCAAACAACAAGGTATCACTTCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTACAGTTCCAGTCTCTGAAGGAAATCAGTGCGGGCAATATCTACATCACTGACAACAGCAACCTGTGTTATTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCATACCATTAACTGGACAACACTCTTCAGCACCATTAACCAGAGAATAGTGATCCGAGATAACAGAAGAGCTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGAATTGTACTGCTGAAGGCATGGTATGCAACCACCTGTGTTCAAATGATGGTTGTTGGGGACCTGGGCCGGAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAGTGCCTGTCATGTCGGCGCTTCAGCAGGGGAAAGATCTGCATAGAGTCTTGCAACCTTTATGATGGGGAATT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCGAGAGTTTGAAAACGGCTCCATCTGTGTTGAGTGTGACTCCCAGTGTGAGAAAATGGAAGATGGACTCCTCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CATGCCATGGACCGGGACCTGACAACTGCACAAAGTGCTCTCATTTTAAGGATGGTCCAAACTGTGTGGAGAAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGTCCAGATGGCCTACAGGGAGCAAACAGTTTCATTTTTAAGTATGCAGATCAGGATCGGGAGTGCCACCCTTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCATCCAAACTGCACCCAGGGGTGTAACGGTCCCACTAGTCATGACTGCATTTACTACCCATGGACGGGCCATT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCACTTTACCACAACACGCTAGAACTCCACTGATTGCAGCCGGAGTCATTGGAGGCCTCTTCATCCTGGTGATC 1998
Query 1 -------------------------------------------------------------------TCTTGGA 7
||.||||
Sbjct 1999 ATGGCTTTGACATTTGCTGTCTATGTCAGAAGAAAGAGCATCAAAAAGAAACGTGCTTTGAGGAGATTCCTGGA 2072
Query 8 AACAGAGTTGGTGGAACCATTAACTCCCAGTGGCACAGCACCCAATCAAGCTCAACTTCGTATTTTGAAAGAAA 81
.||||||.||||.||.||.|||||||||||||||||.|||||||||||||||||||||||.||||||||.||||
Sbjct 2073 GACAGAGCTGGTAGAGCCCTTAACTCCCAGTGGCACGGCACCCAATCAAGCTCAACTTCGCATTTTGAAGGAAA 2146
Query 82 CTGAGCTGAAGAGGGTAAAAGTCCTTGGCTCAGGTGCTTTTGGAACGGTTTATAAAGGTATTTGGGTACCTGAA 155
|.||.||.|||||||||||.|||||||||||.||.|||||||||||.||||||||||||||||||||.||||||
Sbjct 2147 CCGAACTAAAGAGGGTAAAGGTCCTTGGCTCGGGAGCTTTTGGAACCGTTTATAAAGGTATTTGGGTGCCTGAA 2220
Query 156 GGAGAAACTGTGAAGATTCCTGTGGCTATTAAGATTCTTAATGAGACAACTGGTCCCAAGGCAAATGTGGAGTT 229
||.|||||.|||||.||.|||||||||||.|||||.||.|||||.||||||||.|||||.||.||.||||||||
Sbjct 2221 GGTGAAACAGTGAAAATCCCTGTGGCTATAAAGATCCTCAATGAAACAACTGGCCCCAAAGCCAACGTGGAGTT 2294
Query 230 CATGGATGAAGCTCTGATCATGGCAAGTATGGATCATCCACACCTAGTCCGGTTGCTGGGTGTGTGTCTGAGCC 303
|||||||||.||||||||||||||||||||||||||.|||||||||||.||..|..||||.|||||||||||.|
Sbjct 2295 CATGGATGAGGCTCTGATCATGGCAAGTATGGATCACCCACACCTAGTTCGCCTATTGGGAGTGTGTCTGAGTC 2368
Query 304 CAACCATCCAGCTGGTTACTCAACTTATGCCCCATGGCTGCCTGTTGGAGTATGTCCACGAGCACAAGGATAAC 377
|.||.||||||.|||||||.||.||.|||||.|||||||||||..||||.|||||.||.||.||||||||||||
Sbjct 2369 CCACTATCCAGTTGGTTACGCAGCTGATGCCGCATGGCTGCCTACTGGACTATGTTCATGAACACAAGGATAAC 2442
Query 378 ATTGGATCACAACTGCTGCTTAACTGGTGTGTCCAGATAGCTAAGGGAATGATGTACCTGGAAGAAAGACGACT 451
|||||||||||.||||||.|.|||||||||||||||||.||||||||||||||||||||.|||||||||||.||
Sbjct 2443 ATTGGATCACAGCTGCTGTTGAACTGGTGTGTCCAGATTGCTAAGGGAATGATGTACCTAGAAGAAAGACGGCT 2516
Query 452 CGTTCATCGGGATTTGGCAGCCCGTAATGTCTTAGTGAAATCTCCAAACCATGTGAAAATCACAGATTTTGGGC 525
.||||||||||||.||||||||||.|||||||||||||||||||||||.|||||.|||||||||||||||||.|
Sbjct 2517 TGTTCATCGGGATCTGGCAGCCCGCAATGTCTTAGTGAAATCTCCAAATCATGTTAAAATCACAGATTTTGGAC 2590
Query 526 TAGCCAGACTCTTGGAAGGAGATGAAAAAGAGTACAATGCTGATGGAGGAAAGATGCCAATTAAATGGATGGCT 599
|.|||.|.|||||||||||||||||||||||.||||||||||||||.||.||||||||||||||||||||||||
Sbjct 2591 TGGCCCGGCTCTTGGAAGGAGATGAAAAAGAATACAATGCTGATGGTGGCAAGATGCCAATTAAATGGATGGCT 2664
Query 600 CTGGAGTGTATACATTACAGGAAATTCACCCATCAGAGTGACGTTTGGAGCTATGGAGTTACTATATGGGAACT 673
|||||.|||||||||||.|||||||||||.|||||.|||||.||||||||||||||.||.||||||||||||||
Sbjct 2665 CTGGAATGTATACATTATAGGAAATTCACACATCAAAGTGATGTTTGGAGCTATGGCGTCACTATATGGGAACT 2738
Query 674 GATGACCTTTGGAGGAAAACCCTATGATGGAATTCCAACGCGAGAAATCCCTGATTTATTAGAGAAAGGAGAAC 747
||||||||||||||||||.||||||||||||||||||||.|||||||||||.||||||.|.|||||||||||.|
Sbjct 2739 GATGACCTTTGGAGGAAAGCCCTATGATGGAATTCCAACCCGAGAAATCCCCGATTTACTGGAGAAAGGAGAGC 2812
Query 748 GTTTGCCTCAGCCTCCCATCTGCACTATTGACGTTTACATGGTCATGGTCAAATGTTGGATGATTGATGCTGAC 821
||.||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||
Sbjct 2813 GTCTGCCTCAGCCTCCCATCTGCACTATTGATGTTTACATGGTCATGGTCAAATGTTGGATGATCGATGCTGAC 2886
Query 822 AGTAGACCTAAATTTAAGGAACTGGCTGCTGAGTTTTCAAGGATGGCTCGAGACCCTCAAAGATACCTAGTTAT 895
||.|||||||||||.||.|||||||||||||||||||||||.||||||.|||||||||||||||||||||||||
Sbjct 2887 AGCAGACCTAAATTCAAAGAACTGGCTGCTGAGTTTTCAAGAATGGCTAGAGACCCTCAAAGATACCTAGTTAT 2960
Query 896 TCAGGGTGATGATCGTATGAAGCTTCCCAGTCCAAATGACAGCAAGTTCTTTCAGAATCTCTTGGATGAAGAGG 969
|||||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||||||||||||||||
Sbjct 2961 TCAGGGTGATGATCGTATGAAGCTTCCCAGTCCAAATGACAGCAAATTCTTCCAGAATCTCTTGGATGAAGAGG 3034
Query 970 ATTTGGAAGATATGATGGATGCTGAGGAGTACTTGGTCCCTCAGGCTTTCAACATCCCACCTCCCATCTATACT 1043
||||||||||.|||||||||||||||||.||.||||||||.||||||||||||||.||.|||||||||||.||.
Sbjct 3035 ATTTGGAAGACATGATGGATGCTGAGGAATATTTGGTCCCCCAGGCTTTCAACATACCTCCTCCCATCTACACA 3108
Query 1044 TCCAGAGCAAGAATTGACTCGAATAGGAGTGAAATTGGACACAGCCCTCCTCCTGCCTACACCCCCATGTCAGG 1117
||||||.|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 3109 TCCAGAACAAGAATTGACTCCAATAGGAGTGAAATTGGACACAGCCCTCCTCCTGCCTACACCCCCATGTCGGG 3182
Query 1118 AAACCAGTTTGTGTACCGAGATGGAGGTTTTGCTGCTGAACAAGGAGTGTCTGTGCCCTACAGAGCCCCAACTA 1191
|||.|||||||||||||.||||||.||.||||||.|..||||||||.||.|..||||||||||||||.||||.|
Sbjct 3183 AAATCAGTTTGTGTACCAAGATGGGGGCTTTGCTACACAACAAGGAATGCCCATGCCCTACAGAGCCACAACCA 3256
Query 1192 GCACAATTCCAGAAGCTCCTGTGGCACAGGGTGCTACTGCTGAGATTTTTGATGACTCCTGCTGTAATGGCACC 1265
||||.||.|||||.|||||.||.||.||||||||.||.||||||||.|||||||||||||||||||||||.|||
Sbjct 3257 GCACCATACCAGAGGCTCCAGTAGCTCAGGGTGCAACGGCTGAGATGTTTGATGACTCCTGCTGTAATGGTACC 3330
Query 1266 CTACGCAAGCCAGTGGCACCCCATGTCCAAGAGGACAGTAGCACCCAGAGGTACAGTGCTGACCCCACCGTGTT 1339
|||||.||||||||||||||||||||||||||||||||||||||.||||||||.||||||||.|||||.|||||
Sbjct 3331 CTACGAAAGCCAGTGGCACCCCATGTCCAAGAGGACAGTAGCACTCAGAGGTATAGTGCTGATCCCACAGTGTT 3404
Query 1340 TGCCCCAGAACGGAGCCCACGAGGAGAGCTGGATGAGGAAGGTTACATGACTCCTATGCGAGACAAACCCAAAC 1413
.|||||||||||||..||.||||||||.||||||||.|||||.|||||||||||.||||..|||||.|||||||
Sbjct 3405 CGCCCCAGAACGGAATCCTCGAGGAGAACTGGATGAAGAAGGCTACATGACTCCAATGCATGACAAGCCCAAAC 3478
Query 1414 AAGAATACCTGAATCCAGTGGAGGAGAACCCTTTTGTTTCTCGGAGAAAAAATGGAGACCTTCAAGCATTGGAT 1487
|||||||.||||||||.|||||.||||||||||||||.||.||.||.||.||||||||.||||||||.||.|||
Sbjct 3479 AAGAATATCTGAATCCTGTGGAAGAGAACCCTTTTGTGTCCCGAAGGAAGAATGGAGATCTTCAAGCTTTAGAT 3552
Query 1488 AATCCCGAATATCACAATGCATCCAATGGTCCACCCAAGGCCGAGGATGAGTATGTGAATGAGCCACTGTACCT 1561
|||||.||.|||||||.|||.||||..||||||||||||||.||||||||.||.|||||||||||.||.|||||
Sbjct 3553 AATCCGGAGTATCACAGTGCTTCCAGCGGTCCACCCAAGGCGGAGGATGAATACGTGAATGAGCCTCTATACCT 3626
Query 1562 CAACACCTTTGCCAACACCTTGGGAAAAGCTGAGTACCTGAAGAACAACATACTGTCAATGCCAGAGAAGGCCA 1635
|||||||||.|||||..|||||||.|..||.||||||.||||.||||...|||||||..||||||||||.||||
Sbjct 3627 CAACACCTTCGCCAATGCCTTGGGGAGTGCAGAGTACATGAAAAACAGTGTACTGTCTGTGCCAGAGAAAGCCA 3700
Query 1636 AGAAAGCGTTTGACAACCCTGACTACTGGAACCACAGCCTGCCACCTCGGAGCACCCTTCAGCACCCAGACTAC 1709
|||||||.|||||||||||.||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 3701 AGAAAGCATTTGACAACCCCGACTACTGGAACCACAGCCTGCCACCCCGGAGCACCCTTCAGCACCCAGACTAC 3774
Query 1710 CTGCAGGAGTACAGCACAAAATATTTTTATAAACAGAATGGGCGGATCCGGCCTATTGTGGCAGAGAATCCTGA 1783
||||||||.||||||||||||||||||||||||||||||||.||||||||.||.||||||||||||||||||||
Sbjct 3775 CTGCAGGAATACAGCACAAAATATTTTTATAAACAGAATGGACGGATCCGCCCCATTGTGGCAGAGAATCCTGA 3848
Query 1784 ATACCTCTCTGAGTTCTCCCTGAAGCCAGGCACTGTGCTGCCGCCTCCACCTTACAGACACCGGAATACTGTGG 1857
.||||||||.||||||||.||||||||.||||||.|||||||.|||||.||.||||||||||||||||||||||
Sbjct 3849 GTACCTCTCGGAGTTCTCGCTGAAGCCTGGCACTATGCTGCCCCCTCCGCCCTACAGACACCGGAATACTGTGG 3922
Query 1858 TG 1859
||
Sbjct 3923 TG 3924
