Nucleotide Global Alignment

Description

Query:
TRCN0000491781
Subject:
XM_006495693.3
Aligned Length:
3894
Identities:
1665
Gaps:
2035

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAAGCTGGCGACGGGACTCTGGGTCTGGGGGAGCCTTCTGATGGCAGCGGGGACCGTCCAGCCCAGCGCTTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCAGTCAGTGTGCGCAGGAACAGAGAACAAACTGAGCTCTCTCTCTGACCTGGAACAGCAGTACCGAGCCTTGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCAAATACTATGAAAACTGCGAGGTAGTCATGGGCAACCTGGAGATCACCAGCATCGAGCACAACCGGGACCTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCCTTCCTGCGGTCTATCCGAGAAGTCACAGGCTACGTCCTGGTGGCCCTCAACCAGTTTCGTTACTTGCCTCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGAGAATTTACGCATTATTCGTGGGACAAAACTATATGAAGATCGCTATGCCTTAGCGATATTCTTAAACTACA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGAAAGATGGCAACTTTGGACTCCAAGAACTTGGATTAAAGAACCTGACCGAAATACTAAATGGTGGAGTCTAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTAGACCAGAACAAATTCCTATGTTATGCTGACACTATACACTGGCAAGATATTGTTCGGAATCCATGGCCTTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CAACATGACTCTGGTGTCAACAAATGGAAGTTCTGGATGTGGAAGATGCCATAAGTCTTGCACTGGCCGATGCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGGGACCCACAGAAAATCACTGCCAGACCTTGACCAGAACTGTGTGTGCTGAACAATGTGATGGCAGGTGCTAT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGACCCTACGTTAGTGACTGCTGCCATCGAGAATGTGCTGGAGGCTGCTCAGGACCAAAGGACACTGACTGCTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TGCCTGCATGAACTTCAATGACAGTGGAGCCTGCGTTACTCAATGTCCCCAAACATTTGTCTACAATCCAACCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CCTTTCAACTGGAACACAACTTCAATGCAAAGTACACGTATGGAGCATTCTGTGTTAAGAAATGTCCACATAAC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTCGTGGTAGATTCCAGTTCTTGTGTACGAGCCTGCCCTAGTTCTAAGATGGAAGTAGAAGAAAATGGGATTAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AATGTGTAAGCCTTGCACCGATATTTGCCCCAAAGCATGTGATGGAATCGGCACGGGATCACTGATGTCTGCTC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGACTGTGGATTCAAGTAACATTGACAAATTCATAAACTGCACAAAGATCAATGGCAATCTCATCTTTCTTGTC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ACTGGCATTCATGGAGACCCTTACAATGCTATTGACGCCATAGATCCAGAGAAACTGAATGTCTTTCGGACTGT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CAGAGAAATAACAGGTTTCCTGAACATACAGTCTTGGCCCCCAAATATGACAGATTTCAGTGTTTTCTCCAACC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TCGTCACAATTGGAGGAAGAGTCCTCTACAGTGGTCTCTCATTGCTGATCCTCAAACAACAAGGTATCACTTCC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CTACAGTTCCAGTCTCTGAAGGAAATCAGTGCGGGCAATATCTACATCACTGACAACAGCAACCTGTGTTATTA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CCATACCATTAACTGGACAACACTCTTCAGCACCATTAACCAGAGAATAGTGATCCGAGATAACAGAAGAGCTG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AGAATTGTACTGCTGAAGGCATGGTATGCAACCACCTGTGTTCAAATGATGGTTGTTGGGGACCTGGGCCGGAC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CAGTGCCTGTCATGTCGGCGCTTCAGCAGGGGAAAGATCTGCATAGAGTCTTGCAACCTTTATGATGGGGAATT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TCGAGAGTTTGAAAACGGCTCCATCTGTGTTGAGTGTGACTCCCAGTGTGAGAAAATGGAAGATGGACTCCTCA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CATGCCATGGACCGGGACCTGACAACTGCACAAAGTGCTCTCATTTTAAGGATGGTCCAAACTGTGTGGAGAAA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TGTCCAGATGGCCTACAGGGAGCAAACAGTTTCATTTTTAAGTATGCAGATCAGGATCGGGAGTGCCACCCTTG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CCATCCAAACTGCACCCAGGGGTGCATAGGTTCAAGCATTGAAGACTGCATCGGCCTGACGGATAGAACTCCAC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TGATTGCAGCCGGAGTCATTGGAGGCCTCTTCATCCTGGTGATCATGGCTTTGACATTTGCTGTCTATGTCAGA  1998

Query    1  -------------------------------------TCTTGGAAACAGAGTTGGTGGAACCATTAACTCCCAG  37
                                                 ||.||||.||||||.||||.||.||.|||||||||||
Sbjct 1999  AGAAAGAGCATCAAAAAGAAACGTGCTTTGAGGAGATTCCTGGAGACAGAGCTGGTAGAGCCCTTAACTCCCAG  2072

Query   38  TGGCACAGCACCCAATCAAGCTCAACTTCGTATTTTGAAAGAAACTGAGCTGAAGAGGGTAAAAGTCCTTGGCT  111
            ||||||.|||||||||||||||||||||||.||||||||.|||||.||.||.|||||||||||.||||||||||
Sbjct 2073  TGGCACGGCACCCAATCAAGCTCAACTTCGCATTTTGAAGGAAACCGAACTAAAGAGGGTAAAGGTCCTTGGCT  2146

Query  112  CAGGTGCTTTTGGAACGGTTTATAAAGGTATTTGGGTACCTGAAGGAGAAACTGTGAAGATTCCTGTGGCTATT  185
            |.||.|||||||||||.||||||||||||||||||||.||||||||.|||||.|||||.||.|||||||||||.
Sbjct 2147  CGGGAGCTTTTGGAACCGTTTATAAAGGTATTTGGGTGCCTGAAGGTGAAACAGTGAAAATCCCTGTGGCTATA  2220

Query  186  AAGATTCTTAATGAGACAACTGGTCCCAAGGCAAATGTGGAGTTCATGGATGAAGCTCTGATCATGGCAAGTAT  259
            |||||.||.|||||.||||||||.|||||.||.||.|||||||||||||||||.||||||||||||||||||||
Sbjct 2221  AAGATCCTCAATGAAACAACTGGCCCCAAAGCCAACGTGGAGTTCATGGATGAGGCTCTGATCATGGCAAGTAT  2294

Query  260  GGATCATCCACACCTAGTCCGGTTGCTGGGTGTGTGTCTGAGCCCAACCATCCAGCTGGTTACTCAACTTATGC  333
            ||||||.|||||||||||.||..|..||||.|||||||||||.||.||.||||||.|||||||.||.||.||||
Sbjct 2295  GGATCACCCACACCTAGTTCGCCTATTGGGAGTGTGTCTGAGTCCCACTATCCAGTTGGTTACGCAGCTGATGC  2368

Query  334  CCCATGGCTGCCTGTTGGAGTATGTCCACGAGCACAAGGATAACATTGGATCACAACTGCTGCTTAACTGGTGT  407
            |.|||||||||||..||||.|||||.||.||.|||||||||||||||||||||||.||||||.|.|||||||||
Sbjct 2369  CGCATGGCTGCCTACTGGACTATGTTCATGAACACAAGGATAACATTGGATCACAGCTGCTGTTGAACTGGTGT  2442

Query  408  GTCCAGATAGCTAAGGGAATGATGTACCTGGAAGAAAGACGACTCGTTCATCGGGATTTGGCAGCCCGTAATGT  481
            ||||||||.||||||||||||||||||||.|||||||||||.||.||||||||||||.||||||||||.|||||
Sbjct 2443  GTCCAGATTGCTAAGGGAATGATGTACCTAGAAGAAAGACGGCTTGTTCATCGGGATCTGGCAGCCCGCAATGT  2516

Query  482  CTTAGTGAAATCTCCAAACCATGTGAAAATCACAGATTTTGGGCTAGCCAGACTCTTGGAAGGAGATGAAAAAG  555
            ||||||||||||||||||.|||||.|||||||||||||||||.||.|||.|.||||||||||||||||||||||
Sbjct 2517  CTTAGTGAAATCTCCAAATCATGTTAAAATCACAGATTTTGGACTGGCCCGGCTCTTGGAAGGAGATGAAAAAG  2590

Query  556  AGTACAATGCTGATGGAGGAAAGATGCCAATTAAATGGATGGCTCTGGAGTGTATACATTACAGGAAATTCACC  629
            |.||||||||||||||.||.|||||||||||||||||||||||||||||.|||||||||||.|||||||||||.
Sbjct 2591  AATACAATGCTGATGGTGGCAAGATGCCAATTAAATGGATGGCTCTGGAATGTATACATTATAGGAAATTCACA  2664

Query  630  CATCAGAGTGACGTTTGGAGCTATGGAGTTACTATATGGGAACTGATGACCTTTGGAGGAAAACCCTATGATGG  703
            |||||.|||||.||||||||||||||.||.||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 2665  CATCAAAGTGATGTTTGGAGCTATGGCGTCACTATATGGGAACTGATGACCTTTGGAGGAAAGCCCTATGATGG  2738

Query  704  AATTCCAACGCGAGAAATCCCTGATTTATTAGAGAAAGGAGAACGTTTGCCTCAGCCTCCCATCTGCACTATTG  777
            |||||||||.|||||||||||.||||||.|.|||||||||||.|||.|||||||||||||||||||||||||||
Sbjct 2739  AATTCCAACCCGAGAAATCCCCGATTTACTGGAGAAAGGAGAGCGTCTGCCTCAGCCTCCCATCTGCACTATTG  2812

Query  778  ACGTTTACATGGTCATGGTCAAATGTTGGATGATTGATGCTGACAGTAGACCTAAATTTAAGGAACTGGCTGCT  851
            |.||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||.||.||||||||||||
Sbjct 2813  ATGTTTACATGGTCATGGTCAAATGTTGGATGATCGATGCTGACAGCAGACCTAAATTCAAAGAACTGGCTGCT  2886

Query  852  GAGTTTTCAAGGATGGCTCGAGACCCTCAAAGATACCTAGTTATTCAGGGTGATGATCGTATGAAGCTTCCCAG  925
            |||||||||||.||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887  GAGTTTTCAAGAATGGCTAGAGACCCTCAAAGATACCTAGTTATTCAGGGTGATGATCGTATGAAGCTTCCCAG  2960

Query  926  TCCAAATGACAGCAAGTTCTTTCAGAATCTCTTGGATGAAGAGGATTTGGAAGATATGATGGATGCTGAGGAGT  999
            |||||||||||||||.|||||.||||||||||||||||||||||||||||||||.|||||||||||||||||.|
Sbjct 2961  TCCAAATGACAGCAAATTCTTCCAGAATCTCTTGGATGAAGAGGATTTGGAAGACATGATGGATGCTGAGGAAT  3034

Query 1000  ACTTGGTCCCTCAGGCTTTCAACATCCCACCTCCCATCTATACTTCCAGAGCAAGAATTGACTCGAATAGGAGT  1073
            |.||||||||.||||||||||||||.||.|||||||||||.||.||||||.|||||||||||||.|||||||||
Sbjct 3035  ATTTGGTCCCCCAGGCTTTCAACATACCTCCTCCCATCTACACATCCAGAACAAGAATTGACTCCAATAGGAGT  3108

Query 1074  GAAATTGGACACAGCCCTCCTCCTGCCTACACCCCCATGTCAGGAAACCAGTTTGTGTACCGAGATGGAGGTTT  1147
            |||||||||||||||||||||||||||||||||||||||||.|||||.|||||||||||||.||||||.||.||
Sbjct 3109  GAAATTGGACACAGCCCTCCTCCTGCCTACACCCCCATGTCGGGAAATCAGTTTGTGTACCAAGATGGGGGCTT  3182

Query 1148  TGCTGCTGAACAAGGAGTGTCTGTGCCCTACAGAGCCCCAACTAGCACAATTCCAGAAGCTCCTGTGGCACAGG  1221
            ||||.|..||||||||.||.|..||||||||||||||.||||.|||||.||.|||||.|||||.||.||.||||
Sbjct 3183  TGCTACACAACAAGGAATGCCCATGCCCTACAGAGCCACAACCAGCACCATACCAGAGGCTCCAGTAGCTCAGG  3256

Query 1222  GTGCTACTGCTGAGATTTTTGATGACTCCTGCTGTAATGGCACCCTACGCAAGCCAGTGGCACCCCATGTCCAA  1295
            ||||.||.||||||||.|||||||||||||||||||||||.||||||||.||||||||||||||||||||||||
Sbjct 3257  GTGCAACGGCTGAGATGTTTGATGACTCCTGCTGTAATGGTACCCTACGAAAGCCAGTGGCACCCCATGTCCAA  3330

Query 1296  GAGGACAGTAGCACCCAGAGGTACAGTGCTGACCCCACCGTGTTTGCCCCAGAACGGAGCCCACGAGGAGAGCT  1369
            ||||||||||||||.||||||||.||||||||.|||||.|||||.|||||||||||||..||.||||||||.||
Sbjct 3331  GAGGACAGTAGCACTCAGAGGTATAGTGCTGATCCCACAGTGTTCGCCCCAGAACGGAATCCTCGAGGAGAACT  3404

Query 1370  GGATGAGGAAGGTTACATGACTCCTATGCGAGACAAACCCAAACAAGAATACCTGAATCCAGTGGAGGAGAACC  1443
            ||||||.|||||.|||||||||||.||||..|||||.||||||||||||||.||||||||.|||||.|||||||
Sbjct 3405  GGATGAAGAAGGCTACATGACTCCAATGCATGACAAGCCCAAACAAGAATATCTGAATCCTGTGGAAGAGAACC  3478

Query 1444  CTTTTGTTTCTCGGAGAAAAAATGGAGACCTTCAAGCATTGGATAATCCCGAATATCACAATGCATCCAATGGT  1517
            |||||||.||.||.||.||.||||||||.||||||||.||.||||||||.||.|||||||.|||.||||..|||
Sbjct 3479  CTTTTGTGTCCCGAAGGAAGAATGGAGATCTTCAAGCTTTAGATAATCCGGAGTATCACAGTGCTTCCAGCGGT  3552

Query 1518  CCACCCAAGGCCGAGGATGAGTATGTGAATGAGCCACTGTACCTCAACACCTTTGCCAACACCTTGGGAAAAGC  1591
            |||||||||||.||||||||.||.|||||||||||.||.||||||||||||||.|||||..|||||||.|..||
Sbjct 3553  CCACCCAAGGCGGAGGATGAATACGTGAATGAGCCTCTATACCTCAACACCTTCGCCAATGCCTTGGGGAGTGC  3626

Query 1592  TGAGTACCTGAAGAACAACATACTGTCAATGCCAGAGAAGGCCAAGAAAGCGTTTGACAACCCTGACTACTGGA  1665
            .||||||.||||.||||...|||||||..||||||||||.|||||||||||.|||||||||||.||||||||||
Sbjct 3627  AGAGTACATGAAAAACAGTGTACTGTCTGTGCCAGAGAAAGCCAAGAAAGCATTTGACAACCCCGACTACTGGA  3700

Query 1666  ACCACAGCCTGCCACCTCGGAGCACCCTTCAGCACCCAGACTACCTGCAGGAGTACAGCACAAAATATTTTTAT  1739
            ||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 3701  ACCACAGCCTGCCACCCCGGAGCACCCTTCAGCACCCAGACTACCTGCAGGAATACAGCACAAAATATTTTTAT  3774

Query 1740  AAACAGAATGGGCGGATCCGGCCTATTGTGGCAGAGAATCCTGAATACCTCTCTGAGTTCTCCCTGAAGCCAGG  1813
            |||||||||||.||||||||.||.||||||||||||||||||||.||||||||.||||||||.||||||||.||
Sbjct 3775  AAACAGAATGGACGGATCCGCCCCATTGTGGCAGAGAATCCTGAGTACCTCTCGGAGTTCTCGCTGAAGCCTGG  3848

Query 1814  CACTGTGCTGCCGCCTCCACCTTACAGACACCGGAATACTGTGGTG  1859
            ||||.|||||||.|||||.||.||||||||||||||||||||||||
Sbjct 3849  CACTATGCTGCCCCCTCCGCCCTACAGACACCGGAATACTGTGGTG  3894

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