Nucleotide Global Alignment
Description
- Query:
- TRCN0000491781
- Subject:
- XM_006495694.3
- Aligned Length:
- 3894
- Identities:
- 1618
- Gaps:
- 2083
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGCTGGCGACGGGACTCTGGGTCTGGGGGAGCCTTCTGATGGCAGCGGGGACCGTCCAGCCCAGCGCTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCAGTCAGTGTGCGCAGGAACAGAGAACAAACTGAGCTCTCTCTCTGACCTGGAACAGCAGTACCGAGCCTTGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAAATACTATGAAAACTGCGAGGTAGTCATGGGCAACCTGGAGATCACCAGCATCGAGCACAACCGGGACCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCTTCCTGCGGTCTATCCGAGAAGTCACAGGCTACGTCCTGGTGGCCCTCAACCAGTTTCGTTACTTGCCTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGAGAATTTACGCATTATTCGTGGGACAAAACTATATGAAGATCGCTATGCCTTAGCGATATTCTTAAACTACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGAAAGATGGCAACTTTGGACTCCAAGAACTTGGATTAAAGAACCTGACCGAAATACTAAATGGTGGAGTCTAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTAGACCAGAACAAATTCCTATGTTATGCTGACACTATACACTGGCAAGATATTGTTCGGAATCCATGGCCTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAACATGACTCTGGTGTCAACAAATGGAAGTTCTGGATGTGGAAGATGCCATAAGTCTTGCACTGGCCGATGCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGGACCCACAGAAAATCACTGCCAGACCTTGACCAGAACTGTGTGTGCTGAACAATGTGATGGCAGGTGCTAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGACCCTACGTTAGTGACTGCTGCCATCGAGAATGTGCTGGAGGCTGCTCAGGACCAAAGGACACTGACTGCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCCTGCATGAACTTCAATGACAGTGGAGCCTGCGTTACTCAATGTCCCCAAACATTTGTCTACAATCCAACCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTTTCAACTGGAACACAACTTCAATGCAAAGTACACGTATGGAGCATTCTGTGTTAAGAAATGTCCACATAAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTCGTGGTAGATTCCAGTTCTTGTGTACGAGCCTGCCCTAGTTCTAAGATGGAAGTAGAAGAAAATGGGATTAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AATGTGTAAGCCTTGCACCGATATTTGCCCCAAAGCATGTGATGGAATCGGCACGGGATCACTGATGTCTGCTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGACTGTGGATTCAAGTAACATTGACAAATTCATAAACTGCACAAAGATCAATGGCAATCTCATCTTTCTTGTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACTGGCATTCATGGAGACCCTTACAATGCTATTGACGCCATAGATCCAGAGAAACTGAATGTCTTTCGGACTGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAGAGAAATAACAGGTTTCCTGAACATACAGTCTTGGCCCCCAAATATGACAGATTTCAGTGTTTTCTCCAACC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCGTCACAATTGGAGGAAGAGTCCTCTACAGTGGTCTCTCATTGCTGATCCTCAAACAACAAGGTATCACTTCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTACAGTTCCAGTCTCTGAAGGAAATCAGTGCGGGCAATATCTACATCACTGACAACAGCAACCTGTGTTATTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCATACCATTAACTGGACAACACTCTTCAGCACCATTAACCAGAGAATAGTGATCCGAGATAACAGAAGAGCTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGAATTGTACTGCTGAAGGCATGGTATGCAACCACCTGTGTTCAAATGATGGTTGTTGGGGACCTGGGCCGGAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAGTGCCTGTCATGTCGGCGCTTCAGCAGGGGAAAGATCTGCATAGAGTCTTGCAACCTTTATGATGGGGAATT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCGAGAGTTTGAAAACGGCTCCATCTGTGTTGAGTGTGACTCCCAGTGTGAGAAAATGGAAGATGGACTCCTCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CATGCCATGGACCGGGACCTGACAACTGCACAAAGTGCTCTCATTTTAAGGATGGTCCAAACTGTGTGGAGAAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGTCCAGATGGCCTACAGGGAGCAAACAGTTTCATTTTTAAGTATGCAGATCAGGATCGGGAGTGCCACCCTTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCATCCAAACTGCACCCAGGGGTGCATAGGTTCAAGCATTGAAGACTGCATCGGCCTGACGGATAGAACTCCAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGATTGCAGCCGGAGTCATTGGAGGCCTCTTCATCCTGGTGATCATGGCTTTGACATTTGCTGTCTATGTCAGA 1998
Query 1 -------------------------------------TCTTGGAAACAGAGTTGGTGGAACCATTAACTCCCAG 37
||.||||.||||||.||||.||.||.|||||||||||
Sbjct 1999 AGAAAGAGCATCAAAAAGAAACGTGCTTTGAGGAGATTCCTGGAGACAGAGCTGGTAGAGCCCTTAACTCCCAG 2072
Query 38 TGGCACAGCACCCAATCAAGCTCAACTTCGTATTTTGAAAGAAACTGAGCTGAAGAGGGTAAAAGTCCTTGGCT 111
||||||.|||||||||||||||||||||||.||||||||.|||||.||.||.|||||||||||.||||||||||
Sbjct 2073 TGGCACGGCACCCAATCAAGCTCAACTTCGCATTTTGAAGGAAACCGAACTAAAGAGGGTAAAGGTCCTTGGCT 2146
Query 112 CAGGTGCTTTTGGAACGGTTTATAAAGGTATTTGGGTACCTGAAGGAGAAACTGTGAAGATTCCTGTGGCTATT 185
|.||.|||||||||||.||||||||||||||||||||.||||||||.|||||.|||||.||.|||||||||||.
Sbjct 2147 CGGGAGCTTTTGGAACCGTTTATAAAGGTATTTGGGTGCCTGAAGGTGAAACAGTGAAAATCCCTGTGGCTATA 2220
Query 186 AAGATTCTTAATGAGACAACTGGTCCCAAGGCAAATGTGGAGTTCATGGATGAAGCTCTGATCATGGCAAGTAT 259
|||||.||.|||||.||||||||.|||||.||.||.|||||||||||||||||.||||||||||||||||||||
Sbjct 2221 AAGATCCTCAATGAAACAACTGGCCCCAAAGCCAACGTGGAGTTCATGGATGAGGCTCTGATCATGGCAAGTAT 2294
Query 260 GGATCATCCACACCTAGTCCGGTTGCTGGGTGTGTGTCTGAGCCCAACCATCCAGCTGGTTACTCAACTTATGC 333
||||||.|||||||||||.||..|..||||.|||||||||||.||.||.||||||.|||||||.||.||.||||
Sbjct 2295 GGATCACCCACACCTAGTTCGCCTATTGGGAGTGTGTCTGAGTCCCACTATCCAGTTGGTTACGCAGCTGATGC 2368
Query 334 CCCATGGCTGCCTGTTGGAGTATGTCCACGAGCACAAGGATAACATTGGATCACAACTGCTGCTTAACTGGTGT 407
|.|||||||||||..||||.|||||.||.||.|||||||||||||||||||||||.||||||.|.|||||||||
Sbjct 2369 CGCATGGCTGCCTACTGGACTATGTTCATGAACACAAGGATAACATTGGATCACAGCTGCTGTTGAACTGGTGT 2442
Query 408 GTCCAGATAGCTAAGGGAATGATGTACCTGGAAGAAAGACGACTCGTTCATCGGGATTTGGCAGCCCGTAATGT 481
||||||||.||||||||||||||||||||.|||||||||||.||.||||||||||||.||||||||||.|||||
Sbjct 2443 GTCCAGATTGCTAAGGGAATGATGTACCTAGAAGAAAGACGGCTTGTTCATCGGGATCTGGCAGCCCGCAATGT 2516
Query 482 CTTAGTGAAATCTCCAAACCATGTGAAAATCACAGATTTTGGGCTAGCCAGACTCTTGGAAGGAGATGAAAAAG 555
||||||||||||||||||.|||||.|||||||||||||||||.||.|||.|.||||||||||||||||||||||
Sbjct 2517 CTTAGTGAAATCTCCAAATCATGTTAAAATCACAGATTTTGGACTGGCCCGGCTCTTGGAAGGAGATGAAAAAG 2590
Query 556 AGTACAATGCTGATGGAGGAAAGATGCCAATTAAATGGATGGCTCTGGAGTGTATACATTACAGGAAATTCACC 629
|.||||||||||||||.||.|||||||||||||||||||||||||||||.|||||||||||.|||||||||||.
Sbjct 2591 AATACAATGCTGATGGTGGCAAGATGCCAATTAAATGGATGGCTCTGGAATGTATACATTATAGGAAATTCACA 2664
Query 630 CATCAGAGTGACGTTTGGAGCTATGGAGTTACTATATGGGAACTGATGACCTTTGGAGGAAAACCCTATGATGG 703
|||||.|||||.||||||||||||||.||.||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 2665 CATCAAAGTGATGTTTGGAGCTATGGCGTCACTATATGGGAACTGATGACCTTTGGAGGAAAGCCCTATGATGG 2738
Query 704 AATTCCAACGCGAGAAATCCCTGATTTATTAGAGAAAGGAGAACGTTTGCCTCAGCCTCCCATCTGCACTATTG 777
|||||||||.|||||||||||.||||||.|.|||||||||||.|||.|||||||||||||||||||||||||||
Sbjct 2739 AATTCCAACCCGAGAAATCCCCGATTTACTGGAGAAAGGAGAGCGTCTGCCTCAGCCTCCCATCTGCACTATTG 2812
Query 778 ACGTTTACATGGTCATGGTCAAATGTTGGATGATTGATGCTGACAGTAGACCTAAATTTAAGGAACTGGCTGCT 851
|.||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||.||.||||||||||||
Sbjct 2813 ATGTTTACATGGTCATGGTCAAATGTTGGATGATCGATGCTGACAGCAGACCTAAATTCAAAGAACTGGCTGCT 2886
Query 852 GAGTTTTCAAGGATGGCTCGAGACCCTCAAAGATACCTAGTTATTCAGGGTGATGATCGTATGAAGCTTCCCAG 925
|||||||||||.||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 GAGTTTTCAAGAATGGCTAGAGACCCTCAAAGATACCTAGTTATTCAGGGTGATGATCGTATGAAGCTTCCCAG 2960
Query 926 TCCAAATGACAGCAAGTTCTTTCAGAATCTCTTGGATGAAGAGGATTTGGAAGATATGATGGATGCTGAGGAGT 999
|||||||||||||||.|||||.||||||||||||||||||||||||||||||||.|||||||||||||||||.|
Sbjct 2961 TCCAAATGACAGCAAATTCTTCCAGAATCTCTTGGATGAAGAGGATTTGGAAGACATGATGGATGCTGAGGAAT 3034
Query 1000 ACTTGGTCCCTCAGGCTTTCAACATCCCACCTCCCATCTATACTTCCAGAGCAAGAATTGACTCGAATAGGAGT 1073
|.||||||||.||||||||||||||.||.|||||||||||.||.||||||.|||||||||||||.||||||
Sbjct 3035 ATTTGGTCCCCCAGGCTTTCAACATACCTCCTCCCATCTACACATCCAGAACAAGAATTGACTCCAATAGG--- 3105
Query 1074 GAAATTGGACACAGCCCTCCTCCTGCCTACACCCCCATGTCAGGAAACCAGTTTGTGTACCGAGATGGAGGTTT 1147
||.|||||||||||||.||||||.||.||
Sbjct 3106 ---------------------------------------------AATCAGTTTGTGTACCAAGATGGGGGCTT 3134
Query 1148 TGCTGCTGAACAAGGAGTGTCTGTGCCCTACAGAGCCCCAACTAGCACAATTCCAGAAGCTCCTGTGGCACAGG 1221
||||.|..||||||||.||.|..||||||||||||||.||||.|||||.||.|||||.|||||.||.||.||||
Sbjct 3135 TGCTACACAACAAGGAATGCCCATGCCCTACAGAGCCACAACCAGCACCATACCAGAGGCTCCAGTAGCTCAGG 3208
Query 1222 GTGCTACTGCTGAGATTTTTGATGACTCCTGCTGTAATGGCACCCTACGCAAGCCAGTGGCACCCCATGTCCAA 1295
||||.||.||||||||.|||||||||||||||||||||||.||||||||.||||||||||||||||||||||||
Sbjct 3209 GTGCAACGGCTGAGATGTTTGATGACTCCTGCTGTAATGGTACCCTACGAAAGCCAGTGGCACCCCATGTCCAA 3282
Query 1296 GAGGACAGTAGCACCCAGAGGTACAGTGCTGACCCCACCGTGTTTGCCCCAGAACGGAGCCCACGAGGAGAGCT 1369
||||||||||||||.||||||||.||||||||.|||||.|||||.|||||||||||||..||.||||||||.||
Sbjct 3283 GAGGACAGTAGCACTCAGAGGTATAGTGCTGATCCCACAGTGTTCGCCCCAGAACGGAATCCTCGAGGAGAACT 3356
Query 1370 GGATGAGGAAGGTTACATGACTCCTATGCGAGACAAACCCAAACAAGAATACCTGAATCCAGTGGAGGAGAACC 1443
||||||.|||||.|||||||||||.||||..|||||.||||||||||||||.||||||||.|||||.|||||||
Sbjct 3357 GGATGAAGAAGGCTACATGACTCCAATGCATGACAAGCCCAAACAAGAATATCTGAATCCTGTGGAAGAGAACC 3430
Query 1444 CTTTTGTTTCTCGGAGAAAAAATGGAGACCTTCAAGCATTGGATAATCCCGAATATCACAATGCATCCAATGGT 1517
|||||||.||.||.||.||.||||||||.||||||||.||.||||||||.||.|||||||.|||.||||..|||
Sbjct 3431 CTTTTGTGTCCCGAAGGAAGAATGGAGATCTTCAAGCTTTAGATAATCCGGAGTATCACAGTGCTTCCAGCGGT 3504
Query 1518 CCACCCAAGGCCGAGGATGAGTATGTGAATGAGCCACTGTACCTCAACACCTTTGCCAACACCTTGGGAAAAGC 1591
|||||||||||.||||||||.||.|||||||||||.||.||||||||||||||.|||||..|||||||.|..||
Sbjct 3505 CCACCCAAGGCGGAGGATGAATACGTGAATGAGCCTCTATACCTCAACACCTTCGCCAATGCCTTGGGGAGTGC 3578
Query 1592 TGAGTACCTGAAGAACAACATACTGTCAATGCCAGAGAAGGCCAAGAAAGCGTTTGACAACCCTGACTACTGGA 1665
.||||||.||||.||||...|||||||..||||||||||.|||||||||||.|||||||||||.||||||||||
Sbjct 3579 AGAGTACATGAAAAACAGTGTACTGTCTGTGCCAGAGAAAGCCAAGAAAGCATTTGACAACCCCGACTACTGGA 3652
Query 1666 ACCACAGCCTGCCACCTCGGAGCACCCTTCAGCACCCAGACTACCTGCAGGAGTACAGCACAAAATATTTTTAT 1739
||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 3653 ACCACAGCCTGCCACCCCGGAGCACCCTTCAGCACCCAGACTACCTGCAGGAATACAGCACAAAATATTTTTAT 3726
Query 1740 AAACAGAATGGGCGGATCCGGCCTATTGTGGCAGAGAATCCTGAATACCTCTCTGAGTTCTCCCTGAAGCCAGG 1813
|||||||||||.||||||||.||.||||||||||||||||||||.||||||||.||||||||.||||||||.||
Sbjct 3727 AAACAGAATGGACGGATCCGCCCCATTGTGGCAGAGAATCCTGAGTACCTCTCGGAGTTCTCGCTGAAGCCTGG 3800
Query 1814 CACTGTGCTGCCGCCTCCACCTTACAGACACCGGAATACTGTGGTG 1859
||||.|||||||.|||||.||.||||||||||||||||||||||||
Sbjct 3801 CACTATGCTGCCCCCTCCGCCCTACAGACACCGGAATACTGTGGTG 3846
