Nucleotide Global Alignment
Description
- Query:
- TRCN0000491812
- Subject:
- NR_103868.2
- Aligned Length:
- 1647
- Identities:
- 861
- Gaps:
- 714
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACCTCTGGGCAGAGAAACAAAGCTCTATATGCACAGCCCAGCAAAGAGCAGCACACAGCTGAAAGAAAAACTCA 74
Query 1 -----------------------------ATGGATCTCATTCCAAACTTTGCCATGGAAACATGGGTTCTTGTG 45
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GAAGACAGAGCTGAAAAAGAAAACTGGTGATGGATCTCATTCCAAACTTTGCCATGGAAACATGGGTTCTTGTG 148
Query 46 GCTACCAGCCTGGTACTCCTCTATAT--TTATGGGACCCATT----CACATAAACTTTTTAA-GAA----GCTG 108
|||||||||||||||||||||||||| |..|.||| ||| ||.|.|| |.||| ||| .|.|
Sbjct 149 GCTACCAGCCTGGTACTCCTCTATATGGTCTTTGGA---ATTTTGACAGAGAA----TGTAATGAAAAATACGG 215
Query 109 GGAATTCCTGGGCCAACCCCTCTGCCTTT---TC---TGGGAACTATTT--------TGTTCTACCTTAGGAGG 168
.|||.| .|||| |||||| || |||| |||| || ||||| ||.
Sbjct 216 AGAAAT-GTGGG-----------GCCTTTAGGTCCAATGGG----ATTTCTGAAAAGTG-----CCTTA--AGT 266
Query 169 TCT-CTGAATAAG----------------------------ATTCCCAGCTGGGCGTGGTGGCTCACGCCTGT- 212
|.| |||||.|.| ||..|||||| .||||...|||
Sbjct 267 TTTGCTGAAGATGAAGAATGGAAGAGAATACGAACATTGCTATCTCCAGCT-----------TTCACCAGTGTA 329
Query 213 -AATCCCAG--------------------------------CACTTTGGGAGGCTGAAGCAGGAG--------- 244
|||.|.|| .|||| ..|||.||||.|.||||
Sbjct 330 AAATTCAAGGAAGTAAGAAAATAAGGTGATTTATAATTAGAAACTT--AAAGGATGAATCTGGAGACAGGTAAT 401
Query 245 ------GATCA-------------------------------CCTAAGGTCAGGAGTTCGAGACCAG------- 274
.|||| |||.||| |||||....||||.|||
Sbjct 402 GGTCCCCATCATTTCCCAATGTGGAGATATGTTGGTGAGAAGCCTGAGG-CAGGAAGCAGAGAACAGCAAGTCC 474
Query 275 -----------------CTTTG------CCAACATGG-----------------GTCTTTGGA----------A 298
||||| .||.||||| .|.|||||| |
Sbjct 475 ATCAACTTGAAAGATTTCTTTGGGGCCTACACCATGGATGTAATCACTGGCACATTATTTGGAGTGAACTTGGA 548
Query 299 TTTTGACAGAGAAT------------GTAATGAAAAATACGGAG---------AAATGTGGGGCACTCTTTCCA 351
||.|..|| |.||| .|..|||||||||.|.|| |||| ||| |
Sbjct 549 TTCTCTCA-ACAATCCACAAGATCCCTTTCTGAAAAATATGAAGAAGCTTTTAAAAT-TGG------------A 608
Query 352 TTTCTT--ACCCCAGTTTTTGAAGCCCTAAATA---------TCGGTTTGTTTCCAA-----------AAGATG 403
|||.|| |.||| ||||| .|.||.|||| |||.|.||||.||.| |.|.||
Sbjct 609 TTTTTTGGATCCC--TTTTT---ACTCTTAATATACAGAGTCTCGCTGTGTTGCCTAGGCCGGAGTGCATGGTG 677
Query 404 TTACCCATTT----TTTAAAAAATTCCATTGAAA------------GGATGAAAGAAAGTC----GCCTCA--- 454
|.||.| | ||.||||| ||.|...||..|.|| ||||||
Sbjct 678 ----CGATCTGGGCT-----------CACTGAAACCTCCACCTCCTGGGTTCGAGTGATTCTCCTGCCTCAGCC 736
Query 455 -----AAGA--------TAAACAAAAGCATCGAGTAGATTTCTTTCAACAGATGATCGACTCCCAGAATTCCAA 515
|.|| | |.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 737 TCCTGAGGAGCTGGGATT-----ACAGCATCGAGTAGATTTCTTTCAACAGATGATCGACTCCCAGAATTCCAA 805
Query 516 AGAAACAAAGTCCCATAAAGCTCTGTCTGATCTGGAGCTTGTGGCCCAGTCAATTATCATCATTTTTGCTGCCT 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 806 AGAAACAAAGTCCCATAAAGCTCTGTCTGATCTGGAGCTTGTGGCCCAGTCAATTATCATCATTTTTGCTGCCT 879
Query 590 ATGACACAACTAGCACCACTCTCCCCTTCATTATGTATGAACTGGCCACTCACCCTGATGTCCAGCAGAAACTG 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 880 ATGACACAACTAGCACCACTCTCCCCTTCATTATGTATGAACTGGCCACTCACCCTGATGTCCAGCAGAAACTG 953
Query 664 CAGGAGGAGATTGACGCAGTTTTACCCAATAAGGCACCTGTCACCTACGATGCCCTGGTACAGATGGAGTACCT 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 954 CAGGAGGAGATTGACGCAGTTTTACCCAATAAGGCACCTGTCACCTACGATGCCCTGGTACAGATGGAGTACCT 1027
Query 738 TGACATGGTGGTGAATGAAACGCTCAGATTATTCCCAGTTGTTAGTAGAGTTACGAGAGTCTGCAAGAAAGATA 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1028 TGACATGGTGGTGAATGAAACGCTCAGATTATTCCCAGTTGTTAGTAGAGTTACGAGAGTCTGCAAGAAAGATA 1101
Query 812 TTGAAATCAATGGAGTGTTCATTCCCAAAGGGTTAGCAGTGATGGTTCCAATCTATGCTCTTCACCATGACCCA 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1102 TTGAAATCAATGGAGTGTTCATTCCCAAAGGGTTAGCAGTGATGGTTCCAATCTATGCTCTTCACCATGACCCA 1175
Query 886 AAGTACTGGACAGAGCCTGAGAAGTTCTGCCCTGAAAGGTTCAGTAAGAAGAACAAGGACAGCATAGATCTTTA 959
||||||||||||||||||||||||||||||||||||
Sbjct 1176 AAGTACTGGACAGAGCCTGAGAAGTTCTGCCCTGAA-------------------------------------- 1211
Query 960 CAGATACATACCTTTTGGAGCTGGACCCCGAAACTGCATTGGCATGAGGTTTGCTCTCACAAACATAAAACTTG 1033
Sbjct 1212 -------------------------------------------------------------------------- 1211
Query 1034 CTGTCATTAGAGCACTGCAGAACTTCTCCTTCAAACCTTGTAAAGAGACTCAGATCCCACTGAAATTAGACAAT 1107
|||||||||||||||||||||||
Sbjct 1212 ---------------------------------------------------AGATCCCACTGAAATTAGACAAT 1234
Query 1108 CTACCAATTCTTCAACCAGAAAAACCTATTGTTCTAAAAGTGCACTTAAGAGATGGGATTACAAGTGGACCC-- 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1235 CTACCAATTCTTCAACCAGAAAAACCTATTGTTCTAAAAGTGCACTTAAGAGATGGGATTACAAGTGGACCCTG 1308
Query 1180 -------------------------------------------------------------------------- 1179
Sbjct 1309 ACTTTCCCTAAGGACTTCCACTTTGTTCAAGAAAGCTGTATCCCAGAACACTAGACACTTCAAATTGTTTTGTG 1382
Query 1180 ------------------- 1179
Sbjct 1383 AATAAAACTCAGAAATGAA 1401
