Nucleotide Global Alignment
Description
- Query:
- TRCN0000491867
- Subject:
- NR_036569.1
- Aligned Length:
- 3799
- Identities:
- 842
- Gaps:
- 2915
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AATCAGAGCACACCGGACTGCGTTTTTTCCGAACGCCAGCAGCAGGGTCAGAAGGGAGGTAGTCGCCCTCCGTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGGCCTGGCGTGGATTCCGAGCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTACCAGGTAAAGCCCTATCACGGGGTCGGCGCCCCTCTCCGTGTGGAGCCCACCTGCATGTACTGGCTCCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AACATGCACGGCAGGAGCGGCGGCCCAGCACTCGGCACTGGCCACTTGCAGACAAGAAGACAAGAAAATGATTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAACAAAACGACCACTGAAAACAATGCCGGTGGCAAAACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCAAAGAAAGGGTCCCAAGTGGTACATCGTCATAGCTGGAAACAGTCAGAGCCACCAGCCAATGATCTTTTCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGCTGCGAAAGCTGCCAAAAGTGACATGCAGTGTGGCCATGAGGTCTGCCGGAAGTGACTTGTTGGTGTTATC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCCTGAGTTAAAATGTGAAGGGATTTTTTTTTTTCAGATTACTGAGAGTCTTCAGTTACTAGAGGCGGATTTCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGACTGAAGACCATGTTGCAGGCCCACAGCTGCCTACAGAACCGTCCCAAAATATGGCAAAGAAACCTATTCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAGCGATAGGGTCTCACCATGTTGCCCAGGCTGGTCTTGAACTCCTGGACTCATCCTAAAGTGCTGGCCTCTCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTCCCTGTCTGTGCACACCTCACGGCAAGGGCCAGCCTGTTTCCTCCCGGTCACCTCCAAATCTTGCTGCTTTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AATTCAACTCAGAGGCCTAGCCAGGGTTGAGTTCTCACCCACCTGTGCCGCCCTGCCTTGTTACCTGGAAGCAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGCCTTGGGGACTGAGCAGGCCCTCACTGTCACTTTAAGAAGGGAATCAGCCACTTTGTGCTCACCACCTCTGG 962
Query 1 ----------------------------------------------------------------ATGAGAACAG 10
||||||||||
Sbjct 963 GGAAGGTGTGAGAGGAGAGAAGGAAGTGGCTGTTTGGCTGCTGACAACATGAAGACTTCCTGCGATGAGAACAG 1036
Query 11 AGGCACAGGTGCCGGCCCTGCAGCCCCCAGAACCTGGACTGGAGGGGGCCATGGGGCACCGGACCCTGGTCCTG 84
||||||||||||||||||||||||||||||||||.||||||||||||||||||||||.|||||||||||.||||
Sbjct 1037 AGGCACAGGTGCCGGCCCTGCAGCCCCCAGAACCCGGACTGGAGGGGGCCATGGGGCGCCGGACCCTGGCCCTG 1110
Query 85 CCCTGGGTGCTGCTGACCTTGTGTGTCACTGCGGGGACCCCGGAGGTGTGGGTTCAAGTTCGGATGGAGGCCAC 158
||||||||||||||||||.||.||||||||||.|||||||||||||||||.||.||||||||||||||||||||
Sbjct 1111 CCCTGGGTGCTGCTGACCCTGCGTGTCACTGCAGGGACCCCGGAGGTGTGAGTACAAGTTCGGATGGAGGCCAC 1184
Query 159 CGAGCTCTCGTCCTTCACCATCCGTTGTGGGTTCCTGGGGTCTGGCTCCATCTCCCTGGTGACTGTGAGCTGGG 232
||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 1185 CGAGCTCTCGTCCTTCACCATCCGTTGTGGGTTCCTGGAGTCTGGCTCCATCTCCCTGGTGACT---------- 1248
Query 233 GGGGCCCCGACGGTGCTGGGGGGACCACGCTGGCTGTGTTGCACCCAGAACGTGGCATCCGGCAATGGGCCCCT 306
Sbjct 1249 -------------------------------------------------------------------------- 1248
Query 307 GCTCGCCAGGCCCGCTGGGAAACCCAGAGCAGCATCTCTCTCATCCTGGAAGGCTCTGGGGCCAGCAGCCCCTG 380
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1249 ---------GCCCGCTGGGAAACCCAGAGCAGCATCTCTCTCATCCTGGAAGGCTCTGGGGCCAGCAGCCCCTG 1313
Query 381 CGCCAACACCACCTTCTGCTGCAAGTTTGCGTCCTTCCCTGAGGGCTCCTGGGAGGCCTGTGGGAGCCTCCCGC 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1314 CGCCAACACCACCTTCTGCTGCAAGTTTGCGTCCTTCCCTGAGGGCTCCTGGGAGGCCTGTGGGAGCCTCCCGC 1387
Query 455 CCAGCTCAGACCCAGGGCTCTCTGCCCCGCCGACTCCTGCCCCCATTCTGCGGGCAGACCTGGCCGGGATCTTG 528
||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1388 CCAGCTCAGACCCAGGGCTCTCTGTCCCGCCGACTCCTGCCCCCATTCTGCGGGCAGACCTGGCCGGGATCTTG 1461
Query 529 GGGGTCTCAGGAGTCCTCCTCTTTGGCTGTGTCTACCTCCTTCATCTGCTGCGCCGACATAAGCACCGCCCTGC 602
|||||||||||||||||.|||||||.|||||.|||||||||||||||||||.|||||||.||||||||||||||
Sbjct 1462 GGGGTCTCAGGAGTCCTTCTCTTTGACTGTGGCTACCTCCTTCATCTGCTGTGCCGACAGAAGCACCGCCCTGC 1535
Query 603 CCCTAGGCTCCAGCCGTCCCGCACCAGCCCCCAGGCACCGAGAGCACGAGCATGGGCACCAAGCCAGGCCTCCC 676
|||||||||||||||.||||.|||||||.||.||||||.|||||||||||||||||||||.|||||||||||||
Sbjct 1536 CCCTAGGCTCCAGCCATCCCACACCAGCTCCTAGGCACTGAGAGCACGAGCATGGGCACCCAGCCAGGCCTCCC 1609
Query 677 AGGCTGCTCTTCACGTCCCTTATGCCACTATCAACACCAGCTGCCGCCCAGCTACTTTGGACACAGCTCACCCC 750
||||||||||.|||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 1610 AGGCTGCTCTCCACGTCCCTTATGCCACTATCAACACCAGCTGCTGCCCAGCTACTTTGGACACAGCTCACCCC 1683
Query 751 C-ATGGGGGGCCGTCCTGGTGGGCGTCACTCCCCACCCACGCTGCACACCGGCCCCAGGGCCCTGCCGCCTGGG 823
| |..|||||||||||||||||||.|||||||||||||||.|.||||||.||||||||||||||||.|||||||
Sbjct 1684 CGACAGGGGGCCGTCCTGGTGGGCATCACTCCCCACCCACACCGCACACTGGCCCCAGGGCCCTGCTGCCTGGG 1757
Query 824 CCTCCACACCCATCCCTGCACGTGGCAGCTTTGTCTCTGTTGAGAATGGACTCTACGCTCAGGCAGGGGAGAGG 897
||||||||.||||||||||||.|||||||||||||||||||||||||||||||||||||.||||.|||.|||||
Sbjct 1758 CCTCCACATCCATCCCTGCACATGGCAGCTTTGTCTCTGTTGAGAATGGACTCTACGCTTAGGCTGGGCAGAGG 1831
Query 898 CCTCCTCACACTGGTCCCGGCCTCACTCTTTTCCCTGACCCTCGGGGGCCCAGGGCCATGGAAGGACCCTTAGG 971
|||||...|||||||||.|||||||||||||||||||||||| .||||||||||||||||||.|||||||||||
Sbjct 1832 CCTCCCTGCACTGGTCCTGGCCTCACTCTTTTCCCTGACCCT-TGGGGCCCAGGGCCATGGAGGGACCCTTAGG 1904
Query 972 AGTTCGA------------------------------------------------------------------- 978
|||||.|
Sbjct 1905 AGTTCAATGAGAGAGACCATGAGGCCACTGGGCTTTCCCCTTCCCAGGCCTCCTGGGTGCCACCCCCTTACGTT 1978
Query 979 -------------------------------------------------------------------------- 978
Sbjct 1979 ATTCTTGGGCCTCTAATAAGTGTCCCACAGGTGCCTGGCCAGGCCCACCTGCTGCAGATGTGGTCTGTGTGTGT 2052
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2053 GCATGTGTGGGTGTGTGTGGGCACAGGTGTGAGTGTGTGAGCAACAGTACCCCATTCCAGTCGTTTCCTGCTGT 2126
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2127 GACTAAGTCAGCAACACAGTTCCTCTGACATGGGCCTTGGCTGTGCTTCTTTGGGGGTGAAGAGATTGGGGAGG 2200
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2201 AAGTCTCCACCCCTGGGAGGCAGAAGCCAGGCATAGCGCGCTGGCTAGGACTCCAGTACCGTGAAGGGAGGCAG 2274
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2275 TGAGAGCAGACATCTGTGCCTCATTCCTGATCTCAAGGGGAAAGCAAGAACAAGGGAGGCTTCCTCAGGATCTC 2348
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2349 GAACCTGCGGAAGGAGGACCAGTCTGTGTACTTCTGCCAAGTCCAGCTGGACATACAGATCAGGGAGGCTGTCG 2422
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2423 TGGCAGTCCATCAAGGGGACCCACCTCACCATCACCCAGGCCCTCAGGCAGCCCCTCCACAGGGCCCCTCTCCT 2496
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2497 GCCTGGACAGCTCTGCTGGTCTCCCCGTCCCCTGGAGAAGAACAAGGCCATGGGTCGGCCCCTGCTGCTGCCCC 2570
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2571 TGCTGCTCCTGCTGCAGCCGCCAGCATTTCTGCAGCCTGGTGGCTCCACAGGATCTGGTCCAAGCTACCTTTAT 2644
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2645 GGGGTCACTCAACCAAAACACCTCTCAGCCTCCATGGGTGGCTCTGTGGAAATCCCCTTCTCCTTCTATTACCC 2718
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2719 CTGGGAGTTAGCCATAGTTCCCAACGTGAGAATATCCTGGAGACGGGGCCACTTCCACGGGCAGTCCTTCTACA 2792
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2793 GCACAAGGCCGCCTTCCATTCACAAGGATTATGTGAACCGGCTCTTTCTGAACTGGACAGAGGGTCAGGAGAGC 2866
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2867 GGCTTCCTCAGGATCTCAAACCTGCGGAAGGAGGACCAGTCTGTGTATTTCTGCCGAGTCGAGCTGGACACCCG 2940
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2941 GAGATCAGGGAGGCAGCAGTTGCAGTCCATCAAGGGGACCAAACTCACCATCACCCAGGCTGTCACAACCACCA 3014
Query 979 -------------------------------------------------------------------------- 978
Sbjct 3015 CCACCTGGAGGCCCAGCAGCACAACCACCATAGCCGGCCTCAGGGTCACAGAAAGCAAAGGGCACTCAGAATCA 3088
Query 979 -------------------------------------------------------------------------- 978
Sbjct 3089 TGGCACCTAAGTCTGGACACTGCCATCAGGGTTGCATTGGCTGTCGCTGTGCTCAAAACTGTCATTTTGGGACT 3162
Query 979 -------------------------------------------------------------------------- 978
Sbjct 3163 GCTGTGCCTCCTCCTCCTGTGGTGGAGGAGAAGGAAAGGTAGCAGGGCGCCAAGCAGTGACTTCTGACCAACAG 3236
Query 979 -------------------------------------------------------------------------- 978
Sbjct 3237 AGTGTGGGGAGAAGGGATGTGTATTAGCCCCGGAGGACGTGATGTGAGACCCGCTTGTGAGTCCTCCACACTCG 3310
Query 979 -------------------------------------------------------------------------- 978
Sbjct 3311 TTCCCCATTGGCAAGATACATGGAGAGCACCCTGAGGACCTTTAAAAGGCAAAGCCGCAAGGCAGAAGGAGGCT 3384
Query 979 -------------------------------------------------------------------------- 978
Sbjct 3385 GGGTCCCTGAATCACCGACTGGAGGAGAGTTACCTACAAGAGCCTTCATCCAGGAGCATCCACACTGCAATGAT 3458
Query 979 -------------------------------------------------------------------------- 978
Sbjct 3459 ATAGGAATGAGGTCTGAACTCCACTGAATTAAACCACTGGCATTTGGGGGCTGTTTATTATAGCAGTGCAAAGA 3532
Query 979 -------------------------------------------------------------------------- 978
Sbjct 3533 GTTCCTTTATCCTCCCCAAGGATGGAAAAATACAATTTATTTTGCTTACCATACACCCCTTTTCTCCTCGTCCA 3606
Query 979 -------------------------------------------------------------------------- 978
Sbjct 3607 CATTTTCCAATCTGTATGGTGGCTGTCTTCTATGGCAGAAGGTTTTGGGGAATAAATAGCGTGAAATGCTGCTG 3680
Query 979 ------------------------- 978
Sbjct 3681 ACAAAAAAAAAAAAAAAAAAAAAAA 3705
