Nucleotide Global Alignment
Description
- Query:
- TRCN0000492012
- Subject:
- NM_005407.3
- Aligned Length:
- 3066
- Identities:
- 517
- Gaps:
- 2517
Alignment
Query 1 ATGGCGCACGAATC--CGAGAGGAGC--------------TCTCGTCTCGGGGTGCCCTGCGGGGAGCCGGCAG 58
|||.| || |||.||.||| | |..|||||| .|||||..|..|| |||
Sbjct 1 ATGTC-------TCGGCGAAAGCAGCGGAAACCCCAACAGT-TAATCTCGG-----ACTGCGAAGGTCC--CAG 59
Query 59 AGC-TCGGA----GGTGATGCTAGCGAGGAGGATCACCCCCAAGTCTGTGCCAAGTGCTGCGCACAATTCACTG 127
.|| ||.|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 CGCGTCTGAGAACGGTGATGCTAGCGAGGAGGATCACCCCCAAGTCTGTGCCAAGTGCTGCGCACAATTCACTG 133
Query 128 ACCCAACTGAATTCCTCGCCCACCAGAACGCATGTTCTACTGACCCTCCTGTAATGGTGATAATTGGGGGCCAG 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 134 ACCCAACTGAATTCCTCGCCCACCAGAACGCATGTTCTACTGACCCTCCTGTAATGGTGATAATTGGGGGCCAG 207
Query 202 GAGAACCCCAACAACTCTTCGGCCTCCTCTGAACCCCGGCCTGAGGGTCACAATAATCCTCAGGTCATGGACAC 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 208 GAGAACCCCAACAACTCTTCGGCCTCCTCTGAACCCCGGCCTGAGGGTCACAATAATCCTCAGGTCATGGACAC 281
Query 276 AGAGCATAGCAACCCCCCAGATTCTGGGTCCTCCGTGCCCACGGATCCCACCTGGGGCCCAGAGAGGAGAGGAG 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 282 AGAGCATAGCAACCCCCCAGATTCTGGGTCCTCCGTGCCCACGGATCCCACCTGGGGCCCAGAGAGGAGAGGAG 355
Query 350 AGGAGTCTCCAGGGCATTTCCTGGTCGCTGCCACAGAACCAGTA-------TGTGGCA------TTCCTG-TCA 409
||||||||.||||||||||||||||||||||||||| ||| ||.||.| ..|||| ||
Sbjct 356 AGGAGTCTTCAGGGCATTTCCTGGTCGCTGCCACAG-----GTACAGCGGCTGGGGGAGGCGGGGGCCTGATC- 423
Query 410 AATGGCCTG-CCCATG--------AAGCCCTGGAAT----TCCAG------------------CTCCACCTCCA 452
.|||||.| ||||.| ||.||| || ||||| ||||.||||||
Sbjct 424 -TTGGCCAGTCCCAAGCTGGGAGCAACCCC----ATTACCTCCAGAATCGACCCCTGCACCCCCTCCTCCTCCA 492
Query 453 CTA-CCACTCCAAGCC---------------TGGCC-------------------------------------- 472
|.| ||.|||| ||| |||||
Sbjct 493 CCACCCCCTCC--GCCCCCAGGGGTAGGCAGTGGCCACTTGAATATCCCCCTGATCTTGGAAGAGCTACGGGTG 564
Query 473 -----------------CCACCA-------------------------------GTGCTGT---TTGG---CCT 492
|||.|| ||||||| |||| |.|
Sbjct 565 CTGCAGCAGCGGCAGATCCATCAGATGCAGATGACTGAGCAAATCTGCAGGCAGGTGCTGTTGCTTGGCTCCTT 638
Query 493 AGG---AACTGTGG---------------------------CTGGGA-AGG---TGCC---TCCAACAATGGG- 528
||| .||.|||| |||||| ||| |||| ||||.||| |
Sbjct 639 AGGCCAGACGGTGGGTGCCCCTGCCAGTCCCTCAGAGCTACCTGGGACAGGGACTGCCTCTTCCACCAA---GC 709
Query 529 -----------------------ATCCAGGGAAGCC------AAGGAG-AAGACA---GC-----CCCCCTCCT 564
||| ||||| ||..|| |||||| || ||.||||||
Sbjct 710 CCCTACTACCCCTCTTCAGCCCCATC-----AAGCCTGTCCAAACCAGCAAGACACTGGCATCTTCCTCCTCCT 778
Query 565 ATTTCAGCCTCCT--------------GCA------CCCAAGGCAGTGCC------------------------ 594
|||||| ||| ||||| |||| |||
Sbjct 779 -------CCTCCTCTTCCTCTTCAGGGGCAGAAACGCCCAA-GCAG-GCCTTCTTCCACCTTTACCACCCACTG 843
Query 595 -------------------------------------------------------------------------- 594
Sbjct 844 GGGTCACAGCATCCTTTCTCTGCTGGAGGGGTTGGGCGAAGCCACAAACCCACCCCTGCCCCTTCCCCAGCCTT 917
Query 595 -------------------------------------------------------------------------- 594
Sbjct 918 GCCAGGCAGCACAGATCAGCTGATTGCCTCGCCTCATCTGGCATTCCCAAGCACCACGGGACTACTGGCAGCAC 991
Query 595 -------------------------------------------------------------------------- 594
Sbjct 992 AGTGTCTTGGGGCAGCCCGAGGCCTTGAGGCCACTGCCTCCCCAGGGCTCCTGAAGCCAAAGAATGGAAGTGGT 1065
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1066 GAGCTGAGCTACGGAGAAGTGATGGGTCCCTTGGAGAAGCCTGGTGGAAGGCACAAATGCCGCTTCTGTGCCAA 1139
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1140 AGTATTTGGCAGTGACAGTGCCCTGCAGATCCACCTTCGTTCCCACACGGGTGAGAGGCCCTATAAGTGCAATG 1213
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1214 TCTGTGGAAACCGTTTTACCACCCGTGGCAACCTCAAAGTGCATTTCCACCGGCATCGTGAGAAGTACCCACAT 1287
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1288 GTGCAGATGAACCCACACCCAGTACCAGAGCACCTAGACTATGTCATTACCAGCAGTGGCTTGCCTTATGGTAT 1361
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1362 GTCCGTGCCACCAGAGAAGGCCGAGGAGGAGGCAGCCACTCCAGGTGGAGGGGTTGAGCGCAAGCCTCTGGTGG 1435
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1436 CCTCCACAACAGCACTCAGTGCCACAGAGAGCCTGACTCTGCTCTCCACCAGTGCAGGCACAGCCACGGCTCCA 1509
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1510 GGACTCCCTGCTTTCAATAAGTTTGTGCTCATGAAAGCAGTGGAACCCAAGAATAAAGCTGATGAAAACACCCC 1583
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1584 CCCAGGGAGTGAGGGCTCAGCCATCAGTGGAGTGGCAGAAAGTAGCACGGCAACTCGCATGCAACTAAGTAAGT 1657
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1658 TGGTGACTTCACTACCAAGCTGGGCACTGCTTACCAACCACTTCAAGTCCACTGGCAGCTTCCCCTTCCCCTAT 1731
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1732 GTGCTAGAGCCCTTGGGGGCCTCACCCTCTGAGACATCAAAGCTGCAGCAACTGGTAGAAAAGATTGACCGGCA 1805
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1806 AGGAGCTGTGGCGGTGACCTCAGCTGCCTCAGGAGCCCCCACCACCTCTGCCCCTGCACCTTCATCCTCAGCCT 1879
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1880 CTTCTGGACCTAACCAGTGTGTCATCTGTCTCCGAGTGCTTAGCTGTCCTCGGGCCCTACGCCTTCATTATGGC 1953
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1954 CAACATGGAGGTGAGAGGCCCTTCAAATGCAAAGTGTGTGGCAGAGCCTTCTCCACCAGGGGTAATCTGCGTGC 2027
Query 595 -------------------------------------------------------------------------- 594
Sbjct 2028 ACATTTCGTGGGCCACAAGGCCAGTCCAGCTGCCCGGGCACAGAATTCCTGCCCCATCTGCCAGAAGAAGTTCA 2101
Query 595 -------------------------------------------------------------------------- 594
Sbjct 2102 CCAATGCTGTCACTCTGCAGCAGCATGTCCGGATGCACCTGGGGGGCCAGATCCCCAACGGTGGTACTGCACTC 2175
Query 595 -------------------------------------------------------------------------- 594
Sbjct 2176 CCTGAAGGTGGAGGAGCTGCTCAGGAGAATGGCTCCGAGCAATCTACAGTCTCCGGGGCACGGAGTTTCCCCCA 2249
Query 595 -------------------------------------------------------------------------- 594
Sbjct 2250 GCAGCAGTCCCAGCAGCCATCACCGGAAGAGGAGTTGTCTGAGGAGGAGGAAGAGGAGGATGAGGAAGAAGAGG 2323
Query 595 -------------------------------------------------------------------------- 594
Sbjct 2324 AAGATGTGACTGATGAAGATTCCCTGGCAGGGAGAGGCTCAGAGAGTGGAGGTGAGAAGGCAATATCAGTGAGA 2397
Query 595 -------------------------------------------------------------------------- 594
Sbjct 2398 GGTGATTCAGAAGAGGCATCTGGGGCAGAGGAGGAGGTGGGGACAGTGGCGGCAGCAGCCACAGCTGGGAAGGA 2471
Query 595 -------------------------------------------------------------------------- 594
Sbjct 2472 GATGGACAGTAATGAGAAAACTACTCAACAGTCTTCTTTGCCACCACCACCACCACCTGACAGCCTGGATCAGC 2545
Query 595 -------------------------------------------------------------------------- 594
Sbjct 2546 CTCAGCCAATGGAGCAGGGAAGCAGTGGTGTTTTAGGAGGCAAGGAAGAGGGGGGCAAACCGGAGAGAAGCTCA 2619
Query 595 -------------------------------------------------------------------------- 594
Sbjct 2620 AGTCCGGCATCAGCACTCACCCCAGAAGGGGAAGCCACCAGCGTGACCTTGGTAGAGGAGCTGAGCCTGCAGGA 2693
Query 595 -------------------------------------------------------------------------- 594
Sbjct 2694 GGCAATGAGAAAGGAGCCAGGAGAGAGCAGCAGCAGAAAGGCCTGCGAAGTGTGTGGCCAGGCCTTTCCCTCCC 2767
Query 595 -------------------------------------------------------------------------- 594
Sbjct 2768 AGGCAGCTCTGGAGGAGCATCAGAAGACCCACCCCAAGGAGGGGCCGCTCTTCACTTGTGTTTTCTGCAGGCAG 2841
Query 595 -------------------------------------------------------------------------- 594
Sbjct 2842 GGCTTTCTTGAGCGGGCTACCCTCAAGAAGCATATGCTCCTGGCACACCACCAGGTACAGCCCTTTGCCCCCCA 2915
Query 595 -------------------------------------------------------------------------- 594
Sbjct 2916 TGGCCCTCAGAATATTGCTGCTCTTTCTCTAGTCCCTGGCTGTTCGCCTTCCATCACCTCCACAGGGCTCTCCC 2989
Query 595 -------------------------------- 594
Sbjct 2990 CCTTTCCCCGAAAAGATGACCCCACGATCCCA 3021
