Nucleotide Global Alignment
Description
- Query:
- TRCN0000492028
- Subject:
- XM_024447848.1
- Aligned Length:
- 4999
- Identities:
- 2160
- Gaps:
- 2839
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCTTGGAAGAGAAATTATTTTTCAGGGGGTCGTGGTAGTGTACAAGGGATGTTTGCACCTCGAAGCTCAAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCCATAGCCCCCAGCAAAGGCCTCAGCAATGAGCCAGGGCAAAACAGCTGCTTCCTCAACAGTGCCCTGCAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTTTGTGGCACTTGGATATCTTCCGACGTAGCTTTAGGCAGCTTACAACTCACAAGTGCATGGGAGATTCCTGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATCTTTTGCGCTCTCAAGGGAATCTTTAACCAGTTTCAGTGTAGTAGTGAAAAAGTGCTTCCATCTGACACTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCGCAGTGCTCTGGCAAAGACTTTCCAGGATGAACAACGTTTCCAGCTGGGAATTATGGATGATGCTGCAGAGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCTTTGAAAACCTCCTGATGAGAATTCACTTCCACATTGCTGATGAAACCAAAGAGGATATATGTACTGCCCAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CACTGCATTTCCCATCAGAAATTTGCAATGACATTGTTTGAGCAGTGTGTATGTACTAGCTGTGGTGCCACTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGATCCGCTGCCTTTCATCCAGATGGTACATTATATCTCCACCACTTCCCTTTGGCTCAGTACTGGCCAGCAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGGGAGGAGGAGTGGGGATTCTATGAGCTTTGGATCTGGGGACAGCAATCAGGCTATTTGTATGCTGGAAAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGAGAGAAACCTTCACCAAGCATGTTTGGTGAGCTGCTGCAGAATGCCAGCACCATGGGGGATCTGCGGAACTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCCAAGCAACTGTGGAGAGAGGATCAGGATTCGCCGTGTGTTGATGAATGCTCCACAGATTATCACGATTGGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGGTATGGGACTCAGACCACTCAGACTTAGCAGAAGATGTTATCCACAGCCTGGGAACCTGCCTTAAGCTGGGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GATCTGTTTTTCAGAGTGACGGATGACCGGGCCAAGCAATCTGAACTGTACTTAGTTGGAATGATCTGTTACTA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGGCAAACATTATTCTACATTCTTTTTTCAAACAAAGATTCGCAAATGGATGTATTTTGATGATGCTCATGTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGGAGATTGGGCCCAAATGGAAGGATGTGGTGACCAAATGCATCAAGGGGCATTATCAGCCCCTGCTGCTGCTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TATGCAGATCCCCAGGGTACCCCAGTTTCCACCCAGGACCTGCCTCCCCAAGCTGAGTTCCAGTCATACAGCAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GACATGCTACGACAGTGAAGATTCAGGGAGGGAGCCCTCCATCTCAAGTGACACTCGAACAGATTCCTCAACGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGAGCTATCCCTACAAACATTCCCACCATGAGTCTGTGGTCAGTCACTTCTCTTCTGATTCTCAGGGGACAGTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATCTATAATGTGGAAAATGATTCCATGTCTCAGAGCAGTCGGGACACAGGACACCTGACTGATAGTGAATGTAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCAGAAACACACATCCAAGAAAGGGTCACTGATAGAGCGCAAGAGGAGCTCTGGTCGGGTTAGGAGGAAAGGCG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATGAGCCCCAGGCCTCGGGATACCACAGTGAAGGAGAAACACTGAAAGAGAAGCAGGCTCCTAGAAATGCCTCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AAACCATCCAGCAGCACCAACAGGCTGAGAGATTTTAAAGAGACAGTCAGCAATATGATCCATAACAGACCATC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCTGGCTTCTCAGACCAATGTAGGCTCTCACTGCAGGGGCAGAGGAGGAGACCAGCCTGACAAAAAACCTCCTA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGACCCTGCCTTTACACTCTCGTGACTGGGAAATAGAGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCCAGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAGTATCGTCCCACATGGAGACCCAAACGAGAATCTCTGAATATTGACAGTATCTTTAGTAAGGACAAAAGGAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCACTGTGGCTATACCCAGCTTAGCCCCTTTTCTGAGGATTCAGCTAAAGAATTTATACCAGATGAACCAAGCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGCCACCTTCTTACGACATTAAATTTGGTGGACCAAGCCCCCAGTACAAGCGCTGGGGCCCAGCACGGCCAGGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TCTCACCTTTTAGAGCAGCACCCCCGACTAATCCAGCGAATGGAATCTGGCTATGAAAGCAGTGAGAGGAACAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CAGCAGCCCTGTCAGCCTGGATGCAGCCCTGCCTGAGAGCTCAAATGTCTACAGGGATCCAAGTGCTAAGAGAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAGCTGGGTTGGTTCCTTCCTGGCGTCATATCCCAAAGTCGCACAGCAGTAGCATCCTGGAGGTAGACTCCACA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCATCCATGGGTGGCTGGACAAAGAGTCAGCCTTTCTCTGGTGAGGAGATATCTTCTAAAAGTGAACTGGATGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ATTGCAGGAAGAGGTGGCCAGGAGGGCGCAGGAACAGGAACTTCGAAGAAAACGGGAGAAGGAGTTAGAGGCAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CGAAAGGGTTTAACCCTCATCCTAGCCGCTTCATGGACTTGGATGAACTGCAGAATCAGGCTAAACTAAGACTT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GCCCTGCATGGTGCCAGCTGTAGCACGCACAGCAGAGCCCTAGTCGATAAGAAGTTGCAAATCAGTATTCGAAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AGCACGGAGCCTGCAGGATCGCATGCAGCAGCAGCAATCACCACAGCAGCCGTCGCAGCCCTCAGCCTGCCTCC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CAACACAGGCGGGGACTCTCTCTCAGCCAACAAGTGAACAGCCTATCCCGCTCCAAGTATTGTTAAGCCAAGAG 2664
Query 1 ------------------ATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCTGCCATGA 56
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 GCCCAACTGGAATCCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCTGCCATGA 2738
Query 57 GTCACACTCATCACTATCTCCAGAGTCATCTGCCCCACAGCACAGCTCCCCCAGTAGATCTGCCTTGAAGCTTC 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 GTCACACTCATCACTATCTCCAGAGTCATCTGCCCCACAGCACAGCTCCCCCAGTAGATCTGCCTTGAAGCTTC 2812
Query 131 TGACTTCGGTTGAAGTAGACAACATTGAACCCTCTGCATTCCACAGGCAAGGTTTACCTAAAGCACCAGGGTGG 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 TGACTTCGGTTGAAGTAGACAACATTGAACCCTCTGCATTCCACAGGCAAGGTTTACCTAAAGCACCAGGGTGG 2886
Query 205 ACTGAGAAGAATTCTCATCATAGTTGGGAGCCATTGGATGCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGA 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 ACTGAGAAGAATTCTCATCATAGTTGGGAGCCATTGGATGCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGA 2960
Query 279 CAACAGCAGTTGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGCATTGCTCAAGAACAGCTGTTCCAAGAAAAGA 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 CAACAGCAGTTGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGCATTGCTCAAGAACAGCTGTTCCAAGAAAAGA 3034
Query 353 AGGATCCTGCTAACCCCTCCCCGGTGATGCCTGGAATAGCCACCTCTGAGAGGGGTGATGAACACAGCCTAGGC 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 AGGATCCTGCTAACCCCTCCCCGGTGATGCCTGGAATAGCCACCTCTGAGAGGGGTGATGAACACAGCCTAGGC 3108
Query 427 TGTAGTCCTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGC 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 TGTAGTCCTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGC 3182
Query 501 TTCTTCATTTGTGCTTCACTGTCCTGATCCTGTGCAGAAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAAAA 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 TTCTTCATTTGTGCTTCACTGTCCTGATCCTGTGCAGAAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAAAA 3256
Query 575 CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGTTTCCCAGCACAAAGGGGCTT 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGTTTCCCAGCACAAAGGGGCTT 3330
Query 649 GTCCGTTCTCTGGCTGAGCAGTTCCAGAGGATGCAGGGTGTCTCCATGAGGGATAGTACAGGTTTCAAGGATAG 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 GTCCGTTCTCTGGCTGAGCAGTTCCAGAGGATGCAGGGTGTCTCCATGAGGGATAGTACAGGTTTCAAGGATAG 3404
Query 723 AAGTTTGTCAGGTAGTCTAAGGAAGAACTCTTCCCCTTCTGATTCTAAGCCTCCTTTCTCACAGGGTCAAGAGA 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 AAGTTTGTCAGGTAGTCTAAGGAAGAACTCTTCCCCTTCTGATTCTAAGCCTCCTTTCTCACAGGGTCAAGAGA 3478
Query 797 AAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGGGATAGACCACTTTCCTGGGAAGAGTCC 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 AAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGGGATAGACCACTTTCCTGGGAAGAGTCC 3552
Query 871 ACTGAACATTCTTCTCTTGCCTTAAACTCTGGGCTGCCTAATGGTGAAACTTCTAGCGGAGGACAGCCCAGGTT 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 ACTGAACATTCTTCTCTTGCCTTAAACTCTGGGCTGCCTAATGGTGAAACTTCTAGCGGAGGACAGCCCAGGTT 3626
Query 945 GGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTA 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 GGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTA 3700
Query 1019 CTGACTTGGGGACTTCCTTGCCTTTGGATTCCTGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCAT 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 CTGACTTGGGGACTTCCTTGCCTTTGGATTCCTGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCAT 3774
Query 1093 GGGGCACCTAGGCCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAGAGAAATCA 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775 GGGGCACCTAGGCCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAGAGAAATCA 3848
Query 1167 CATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACCTCAGAATTGGAGTCTCTGTATCAGGCCA 1240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849 CATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACCTCAGAATTGGAGTCTCTGTATCAGGCCA 3922
Query 1241 GTCTTCAGGCTTCTCAAGCTGGCTGTTCTGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACA 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3923 GTCTTCAGGCTTCTCAAGCTGGCTGTTCTGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACA 3996
Query 1315 GGCTCTGCAGATGGCATGGGGAGGAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGA 1388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3997 GGCTCTGCAGATGGCATGGGGAGGAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGA 4070
Query 1389 AATGGAGCATGGTCTCCATGAAGCCAGAACA------------------------------------------- 1419
|||||||||||||||||||||||||||||||
Sbjct 4071 AATGGAGCATGGTCTCCATGAAGCCAGAACAGTGCGTACTTCTCAGGCTACACCTTGCCGAGGCCTCAGCAGGG 4144
Query 1420 -------------------------------------------------------------------------- 1419
Sbjct 4145 AGTGTGGGGAGGATGAGCAGTACAGTGCAGAGAATTTACGTCGCATCTCACGCAGTCTCAGTGGCACCGTTGTC 4218
Query 1420 ---------------------------------------GATTCATCAAACGTGAGGAAGCCTTTGGAAACCGG 1454
|||||||||||||||||||||||||||||||||||
Sbjct 4219 TCAGAGAGGGAGGAAGCTCCGGTTTCTTCCCACAGTTTTGATTCATCAAACGTGAGGAAGCCTTTGGAAACCGG 4292
Query 1455 GCACCGTTGTTCCAGCTCCTCTTCCCTCCCTGTCATCCATGACCCTTCTGTGTTTCTCCTCGGTCCCCAACTCT 1528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4293 GCACCGTTGTTCCAGCTCCTCTTCCCTCCCTGTCATCCATGACCCTTCTGTGTTTCTCCTCGGTCCCCAACTCT 4366
Query 1529 ACCTTCCCCAACCACAGTTCCTGTCCCCAGATGTCCTGATGCCCACCATGGCAGGGGAGCCCAATAGACTCCCA 1602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4367 ACCTTCCCCAACCACAGTTCCTGTCCCCAGATGTCCTGATGCCCACCATGGCAGGGGAGCCCAATAGACTCCCA 4440
Query 1603 GGAACTTCAAGGAGTGTCCAGCAGTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACAC 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4441 GGAACTTCAAGGAGTGTCCAGCAGTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACAC 4514
Query 1677 AGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGACAACTCCTGGGCACCCTGGTCAGAGA 1750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4515 AGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGACAACTCCTGGGCACCCTGGTCAGAGA 4588
Query 1751 CCAACCAGCATATTGGGACCAGATTCCTGACTACTCCAGGGTGCAATCCTCAACTAACCTACACTGCCACACTA 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4589 CCAACCAGCATATTGGGACCAGATTCCTGACTACTCCAGGGTGCAATCCTCAACTAACCTACACTGCCACACTA 4662
Query 1825 CCAGAAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCCATTCACCCTCCCACCC 1898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4663 CCAGAAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCCATTCACCCTCCCACCC 4736
Query 1899 TCCCATTGTTCATCCTGTGTACCCACCATCTAGCAGTCTTCATGTACCCCTGAGGTCAGCTTGGAATTCAGATC 1972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4737 TCCCATTGTTCATCCTGTGTACCCACCATCTAGCAGTCTTCATGTACCCCTGAGGTCAGCTTGGAATTCAGATC 4810
Query 1973 CTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAAGCAGT 2046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4811 CTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAAGCAGT 4884
Query 2047 TATGCCTCCCACTCTGGACACAGGAGAACAGTGGGAGAGGGGTTTCTGTTTGTTCTATCAGATGCTCCCAGAAG 2120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4885 TATGCCTCCCACTCTGGACACAGGAGAACAGTGGGAGAGGGGTTTCTGTTTGTTCTATCAGATGCTCCCAGAAG 4958
Query 2121 AGAGCAGATCAGGGCTAGAGTCCTGCAGCACAGTCAATGGG 2161
||||||||||||||||||||||||||||||||||||||||
Sbjct 4959 AGAGCAGATCAGGGCTAGAGTCCTGCAGCACAGTCAATGG- 4998
