Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- NR_027840.2
- Aligned Length:
- 7117
- Identities:
- 63
- Gaps:
- 7045
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGGTGCCCGGCTGGACCGCGAGGGACCCGGGCGTCCCCTCGGCCGCGGCAGTCGGAGGAGGGGCTGTGGAGGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGGCAGGGGCGCTGCGGGCCCGAAGGTTCGCAGGGTCGCGGGGGGCGTCTCTTCTCCCCGGAGGGGCTACGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCGCCGCTCGCCGGCTCTTTGTGAGGAAAGATCTGCCGGTTTCCCCGGAGCGCGTTCGCGGTGGGCGTTATCGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGAGCGAGGGGAATGGTCCGACCGAGCCGTTCTCTCTGAAGAAAGGTCTTGGAGAGCCCGGCCGGGGCTGCGGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGTTAAACCAGCGCTTCCGGAGCTTTCCCTGGTCGCCGGGCGTTCCAGGCCGGCGCCGGCCATGGCTGCCGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGCGACTCTCGGGGCCACCTCCGGCCGCGGCCCCGGAGCGTCTGTCAGAAAGGAAGCAGCGCTCGGCCGCCTGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGATGTGGTTGTGTATTGAGCGCTGCCTAGAAAAGCACAGTCTCCCTCTCCAGGCCTCAGAGCTAGCTAATGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGAGAAAGCAAACATCTTTGAAGGAGAGATGATTGCTGTGGCTCGCTGAGAAGCCAGATGATATCATCAAGTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAATCGAAAGGAAGGGAAGAAGCAGAATTTTCCAAGACTAAATAGAAGACTCCTCCAGCAAAGTGGTGCCCAGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AATTCAGGATGAGAGTGCGATGGGGAATCCAACAGAATTCTGGTTTTGGTAAGACTAGTCTGAATCGTAGAGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGAGTAATGCCTGGAAAGAGACGTCCTAATGGAGTTATCACTGGCCTTGCAGCTAGGAAAACGACTGGAATTCG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAAAGGAATTAGTCCTATGAATCGTCCACCTCTAAGTGACAAGAATATAGAACAATATTTTCCAGTGTTAAAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGAAGGCAAACCTTCTGAGACAAAATGAAGGGCAGAGGAAACCAGTAGCAGTTCTCAAGAGACCTAGCCAGCTA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGCAGAAAAAATAACATTCCAGCTAATTTTACCAGGAGTGGAAATAAATTAAATCATCAGAAAGATACTCGTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGCAACTTTTCTTTTCAGAAGAGGCCTGAAGGTGCAGGCCCAGTTGAATACAGAACAACTGCTAGACGATGTAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TAGCAAAGAGAACTCGTCAATGGCGGACTTCCACCACAAATGGAGGGATTTTGACTGTATCTATTGACAATCCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGAGCAGTGCAATGCCCAGTAACTCAGAAACCACGATTAACTCGTACTGCTGTACCTTCATTTTTAACAAAGCG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGAGCAAAGTGACGTCAAGAAAGTTCCTAAAGGTGTTCCCCTGCAGTTTGACATAAACAGTGTCGGAAAACAGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAGGGATGACGTTGAATGAGCGGTTTGGGATCCTGAAGGAACAAAGAGCCACTCTCACATACAACAAAGGGGGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGCCGCTTTGTCACCGTGGGATAGGTCCCATGTCAAAGGAACTTTTGAGTGATGACTCTGAGAAGTTGAATTGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTGAAGAGTTCATCACGGAAATTCAAGAAACTTTACTTCAAAATATTCACAAGGCTAAATAACTCTTATTTTTA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTTTTGAAGGTTTTTTTTTTTAAAAAAAAAAACGTATAAAATAATGCCCTGAAAGAATAATAGGGATTATACCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTCTGTTCTTAAAGATTTCATGGTTGGCTCAGACAGAACAATCATCTGTTTGACTTCTTTGGTTCCTCATGCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CAGAAGGAAGACAGAAAGATAGAAATTGATTATTTTTATGATAGCAGTATTCAGGATCTCATCACCTTTGCCCG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGTTTTAGACTTTGTCATGGTAAATCCTGGTCTTCATAAACATGAGTAGGTCCCTTGGTTGCTGTCACTTGCCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTTAATAGTGTTGATGTAGTCAGTGCCGTTGCCTTTTCTTCATTAGAGACACAGAACAATGTATTAGAATTTCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGCTGTGGGTTTGAAGACTTAGGGGGACATCCAGAACGTGCTTCCTCTTTCAGACGGTGTAAAGTCCCCTGGAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTACACAGCTTTAGTGCTGAGCTTTTAACAGGAAATGTGGCCCTAGGTATTAGTCTTAGTTTAAAATGTTGGTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTTAGAGACTGTAAATGCATATTCACAAAGTTATCTGATAGGGCCTTGGAGGAGAAGGTCCAGTTTTAAAAAAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GACAGTTTGTGTTTAATAAATGAAGGCATGAGAGGAAGTAAGTAGCAAGTTGAAGGACAGGTAGTTGAGATGAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACACTTCAAAACCCTGGTTATAGATGTACTGTTTGGATGTAGCATAGTCTTGAGTCTAGCGTCCACAAAGAATT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ATTCAAATGATATTTAGAAGAATTATAACTATTACATTGAATGGAGTCCCTTGGATATTTTGATAGTAAAATTA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ATAGCCATAAAGTCCTAGACTTCTTATTTGAAGTTAAAATTTCTTATTTGAAAAGTTGAAATTTATGAGCTTTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AAGATTGCTAAATTAAATAATTTATAGCTCCAAAAACAAAAATATACTTGTATATGTCACAGAGAAAAAAAATG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAAAATTTATAATAGAGTTACATTAACCTTGTTGTTTACCTTTCACTGATTTCTTATATGGTATAAATTAAAGT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TCAGGCATTTATGGGGAGAAAAGGCCCTCCCCACCGACCCGCCACCTGCCACCTCTGACGGAGTGGGAGAAGTT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGTCTGTGCTAAGATAGTACTGAGTCCCCAGATGTTGTATACTGTAAATTACAGTATAATGCCAAATGCAGCAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AATCTTCCAGCTGTACGTTACAAGTTTGGTCATTTTGAAGCTTGACATTTTAGTTTGCCATTATGTTAAAAACA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TCTAAATAGGTGTTAGTTTCTCAGGAGTAGATTGTTAGTGTTGACTTTTCCTGTAAAGCAGACATCGTTCTTGG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CCTGCCCTGCATTGTATACTAGATTTCATTGTTGTCTCTCATGCTTCTTGAGTTGCTTCATGGTTTATGCTCGC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CATGGAAAGCTATCAGTAACAGTTTCATGCTTATACCAAAGAATTAAATCTGATCTTTAATATCTGATATTTTC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CTGGTACTCGTACTGATAAGGGATTATTGGAAGTCAGTCACAGAATTTGGAAATAAATTCTAGTCTCTCCTTAG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CTATTTGATGCTTTTCATATAGGCCAAGAACTCATTGCAAAACATTTTTGCAAGGATGAATGCCTGTATTTGGT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CTAGGAACAGTACATTTTAGTCTGATTTAGAATTACTGGTAGCTTATTTTAAAGCAAGGAAAAGCAGCTGAGCT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CAAGTTTGCTGTCTTTAGAATGGTTTGTGAAAATATGGTATAAAGGTGTTTTCATTTTCCTGTTCTTACCTATT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 ATTGTATAGAGCTATTCATGCCATTTTTTGGGAAAACTTTAAAAATTGCCCCAAATACTGACATTGAGTGCATT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AAATAACAAATTATCTTTGATACATTAAACTTTTATTCTTCATGCATCTGTAATTTAATTTTAAGTATAATGTT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TTGCCTTTGGTACAACTAAATTAAAACTCTTGGTGGTCACATATTGTATATAAACAAAACAATATGCTTTGTTG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 AAGGAAAATTTTCTTTATTGGAATGTGGTTGTAATCCTTGTTCAGTTCTTAAGTTTCGGTTTTTTTTAAAAACA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GGATGCAACTTAAACTTTTCTTTGCATCAAGGTATATGCAAAACATTGGTGCCGTGCATCACCAAATGAAAGTT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TGTATTTAACGAGGAGGTGCTTTACACTGTACTTTTTGGTGTTTTTTGGAAAAGTTACATTTAGATCTATTCTG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AAGCTGTTCATTTTTAACAAATAAAATGTTACAGGTTTCACATGATTTATTCTCAGCTCTAAAGATTGAGTTGT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GGTTTTTAGATTGTTCTATGTTACGAAGAACTTTGTAGTGGTTATCTATATTTGTAGTTTTTAGGGTGTGAAAC 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CTTATCTACTAGCAAAATTGGTAAATCACTGTAGACTCTTCTATTAGCATCCCTCTCTCTTTTGATGATTTCAT 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TTGTAGCTCCAACAAATGAATCTAAAAAGAAGAATCCAGGCTGGGCACGGTGGCTCATGCCTGTAATCCCAGAA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 CTTGGGGAGGCCAAGGCGGGCGGATCATGAGGCCAGGAGCAAGACCAGCCTGGCTAACATAGGGAGACTCTATC 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 TTTACTAAAAATACAGACATTAGCTGGTGTGGTGACATGTGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCG 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 GGAGAATTGCTTGAATCCAGGAAGCAGAGATTGCAGTGAGCCGAGACCACGCCATTGCACTCCAGCCTGGGTGA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 CAGAGTGACACTCTGTCTTAAAAAAACAAAAAAAAAGAATCCAGTATACTTTGCAATGCAGAATATTGGGTTAG 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 ATGAGCCTTTAGAGACTAATCCAGTTTAACCCCTCCTTTTTACACCTTAGTAAAGTGAGTCCTAGTGTTTTCAA 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 GACTTGCATGTGGCAGAGTTATTTTTTGAGCTCAGATCTTCTAATTCTTAATTGATAATAAACTGCTTTGGTGA 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 ATTAACACCCACAGAAAATAGTGGAATGGTGTGTGGTTTTCAAATACCTAAGAATTGGTAATAGCCATGCTTTA 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 GCATTTTTAGCATGGTAAGTAAATCTATTCTACCAGTGATGGTTATACTTTATTACTTTGCTATTTGGGTTAGG 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 TAGACCTGTTAGAAAAGTCCAGTGTTCCTAATCAGATATGCATTTTTTAAAAACAGGCATAAACTCTTCACCAC 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 AATTTTAATTACAGTCATCCCTCAGTATACACGGAGGATTGGTTCCAGGACCCTTGTATATACCCAACCCTGCG 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 CAATACTGAAGTCCCACATCTGTGTAAACGAAAAGTTGGCCCACTGTGTACATGGATTTTCCATTCCAAGATGT 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 TTTTTTGGTTCAAAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTGAAGGGCCAACTGT 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 TTAAGCCAATCGTAAAATACTGTGTCTGAGGAAACAGGCCTCATTGCTCAGCAGTGAGTTTTTATTAGACTAGG 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 TATGTATATCATTATTAATATTTTACTGTAAATAGCTTTGTAATTCACACAAAGTATACGGGCCCAGCAGGCCT 5106
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5107 CATTGCTCAGCAGTGAGTTTTTATTAGACTAGGTATGTATATCATTATTAATATTTTACTGTAAATAGCTTTGT 5180
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5181 AATTCACACAAAGTATACGGGCCCAGAATAATTTTTGTTGATTTATTTTTACTATAAGGAGATAAGAGAAAAAA 5254
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5255 TAGCTCACTTGGCAGCACAGAAAATGAATACCATATTGGCAATATTAAAGCAGAAAATAATTCATTTCTGATCA 5328
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5329 GTAGTGCTTTCAGTTTTCATCAGAATTATTATTATTATTATTATTTTGCCACTGTGAAAAAGCAGTTAAGCATG 5402
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5403 TAAAACTTCCCTTTAGAGAGGGTTCTTTTTGGATAGATCAATTTGGAACTAGCTTCTTTTTTTTTTTTTTAAAT 5476
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5477 GATACTTCAGTAAACACAGCATTTACAACAAGAATTGTGGACTATGGTGGACCATTAATAGGGATTTAAAGATT 5550
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5551 TACTTAGAAATTGTAGACTTCTAATATCTTTTATTTCCCTTCTCACCACAGTTTATTTTCTTTTTTCTTTTTCT 5624
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5625 TTTTTTTTTTTTCTTTTTTTTCTTTTTTTGAGATGGAGTTTCACTCTTGTTGCCCAGGTTGGAGTGCAATGGTG 5698
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5699 CGATCTCGGCTCACCCCAACCTCCGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTGGCTGGG 5772
Query 1 --------------------------------------------------ATGGGGTTTCTCCATGTCGGTCAG 24
|.|||||||||||||||.||||||
Sbjct 5773 ATTACAGGTGCCCACCACCATGCCCAGTTAATTTTGCATTTTTAGTAGAGACGGGGTTTCTCCATGTTGGTCAG 5846
Query 25 GCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC-------------------------- 72
||||||||..||||||||||.||||||||||.|||..||||.||||||
Sbjct 5847 GCTGGTCTCAAACTCCTGACTTCAGGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAG 5920
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5921 CCACCGCACCCAGCCTACAGCTTATTTTCTACCTATGTTTAACAGGAAGCTTGATAACACAAGCAAATGTGATG 5994
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5995 CCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGATGAGGTATACCAGTGTTTAAAGATTAGTTGGAA 6068
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6069 GTTATTCTCCTAGTGTGCATATTTAATTTCTACTTACTCCATTTCCCTTTAATGAGAAAAGAATCATATTGTCT 6142
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6143 GAATTTTCCTGTATAAAGTTTAAAAAAGTTAATTATTAGGACTTGTTTTTAAAGGAGTAAGCAATGGAAGGATC 6216
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6217 AAACATTTATTAAATATATTCAGCAAATATTTAGAATTAAATGTATTCAGCAAGGAAGAGAATGGGATTCATAC 6290
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6291 TGCTTGGAGTTTATAAAAGCGGAGTTTTTTTATTTTTTGAGACGGAATACTCTGTCACCCAGGCTGCAGTGCAG 6364
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6365 TGGCACAATCTCGGCTCACTGCAGCCTCTGCCTCCCAGGATCCTTTCCGGGTTCAAGCAATTCTTGTCCCTCAG 6438
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6439 CCTCGTAAGTAGGTGGGATTACAAGCTTGAGCCACCACAGCCAACTAATTTTTGTGTTTTTAGTAGAAATGAGT 6512
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6513 TTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTACCCTCAGGAGATCTGCCTGCCTCAGCTTCCCAAAGTGC 6586
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6587 TGGGATTACAGGTGTGAGCCACCACGCCCGCCCTAAAAGTGGATTCTTTTTTTTTTTTTTTTTTTTGGAGACAG 6660
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6661 TCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTAGTGATCTTGGCTCACTGCAGCCTCTGCCTCCCGGGTTCAAGC 6734
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6735 GATTTTCCTGTCTCAACCTTCCAAGTATCTGGGATTACAGGCACGTGCCACTACACCCAGCTAATTTTTGTACT 6808
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6809 AAGACGAGGTTTCACCATATTGGCCAGTCTAGTCTCAAACTCCTGACCTCAGGTGATATGCCCGCCTCTGACTC 6882
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6883 CCAAAGTGCTGGGATTACAGGCATGAGCTACGGAGCCCGGCCTAGAAGTGGAGTCTTAGAAGGAGTGACCATGA 6956
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6957 TATGTTTCTACTGAGTAGAAGGGGGAAGGGAGGACATAACCTTTGCATGATATAGTGAAATGCAGAGCTGGAAA 7030
Query 73 -------------------------------------------------------------------------- 72
Sbjct 7031 GAACTATTAAGATTTGAGTGAAACTTTTGCCCCCTGTGTTGAATGAGTTAACTTTCAGTCTGTAAAATAAACAG 7104
Query 73 ------------- 72
Sbjct 7105 GAAGAACTGGGAA 7117
