Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- NR_029427.3
- Aligned Length:
- 5766
- Identities:
- 65
- Gaps:
- 5694
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTTTCTGATAGCAGGCAGCCATCTTGCCTGGAGCCTGAGAAAGGGAGGAGAGACAGAAGGAACCGGCGACAGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTCTCAGGGCCGCTCCGGGGGGCCTCAAGAACCGGAGGCAGCCCCGGAGGTGGTCCCCGATCCCGGGCTATGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTTGGATCTGAGAAGGGAAGGCGGAGGGCGGCGGGGACAAGATGGGTGGAGAATGTCAAGCAAGGAATGCTAGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGGGGAGGGGCGTTGCTATGGCGACTGGGGAGGGGCGGTGTCTGTTCTGAATCGCTGTGTGTCACCCGGGCGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGCCCAGGAAGGGCAGGGCTGGGGTGATGACCATGGTAACACCCGGGGGGGAGTTCGTGACATCTCCGGCGCGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGGGACTCGATGTCTATGGCAATGGTCGCCTGGTGGAAGGGACGGAACTAGATCCCTTCGCTCGGGACGCTCAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATTCCAGGCCCTTGTCCTGCAGGCTGCCGCGGGCGGACACGCCAGAGGAGGAGGCCGGGGAATGGCCGCGGTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGCAGCAAGTCTTAGCAGTGGACGCGAGTTTCGGACGCAGTATATCCGCCGGCGCAGCCAGCTGCTGCGGGAGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATGCCAAGGCTGGGCACCCCCCAGCGCTGCGTCGGCAGTACCTGAGGCTTCGGGGGCAGCTGCTGGGCCAGCGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGCCTATAGCAACAGCATCGTCCGCAGTAGCCGCACTACTCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGACCGCATGGAGGACTTTGAGGATGATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGTCAGCAGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTCCTACCAGCTGCAGGCGCAGATGAACCGTGCCGTCTATGAGGACAGGCCCCCTGGCAGCGTGGTGCCCACG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCAGCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGTCACTGAGCGAGAACTATGCCTTTGCGGGCATGTA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCATGTTTTTGACCAGCACGTGGATGAGGCAGTCCCAAGGGTGCGCTTCGCCAATGATGACCGACACCGCCTGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCTGCTGCTCACTCGACGGCAGCATCTCCCTGTGCCAGCTGGTGCCTGCCCCACCCACAGTGCTTCGCGTGCTA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CGGGGCCACACCCGTGGTGTCTCCGACTTCGCCTGGTCCCTCTCCAATGACATCCTCGTGTCCACCTCACTGGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGCCACCATGCGCATCTGGGCCTCTGAGGATGGTCGCTGCATCCGAGAGATCCCTGACCCCGATAGCGCTGAAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGCTCTGCTGCACCTTCCAGCCTGTCAACAACAACCTCACTGTGGTGGGGAACGCCAAGCACAACGTGCATGTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATGAACATCTCCACAGGCAAGAAAGTGAAGGGGGGCTCCAGCAAGCTGACAGGCCGTGTCCTTGCTCTGTCCTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGATGCCCCTGGCCGGCTGCTCTGGGCGGGTGATGACCGTGGCAGTGTCTTCTCTTTCCTCTTTGATATGGCCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGGGAAGCTGACCAAAGCCAAGCGTTTGGTGGTGCATGAGGGGAGCCCTGTGACCAGCATCTCAGCCCGGTCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGGGTCAGCCGCGAGGCCCGGGATCCCTCACTGCTCATCAATGCTTGCCTCAACAAGTTGCTGCTCTACAGGGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGTAGACAACGAGGGGACCCTGCAGCTGAAGAGAAGCTTCCCCATCGAGCAGAGCTCACATCCTGTGCGCAGCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCTTCTGTCCCCTCATGTCCTTCCGCCAGGGGGCCTGCGTGGTGACGGGCAGTGAGGACATGTGCGTGCACTTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTTGATGTGGAGCGGGCGGCCAAGGCTGCTGTCAACAAGCTGCAGGGCCACAGTGCACCTGTGCTTGATGTCAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTTCAACTGCGACGAGAGCCTACTGGCCTCCAGTGACGCCAGCGGCATGGTCATCGTCTGGAGGCGGGAGCAGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGTAGGGTCCTGTCGGCCCTGCTGCTGTCCTCCATCCCACCCCTCTTACTCCAGCCTCGTGTTGTAAATAAAGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTCGGTGGTCATGCTGAGGGCCGGCTCCCAGCTCTGCCGGGGACGGACAGGGCAGAGGGCAGCGGGCAGCTCCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGAACACGGTGGAACGGGGTTCATTGACTCATTTGTGCATTCATGCATCGACGGATTCATTCATTCCACAAGCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTGATTGAATGTCTGCTGGGTTACAGGCCCTGCCTTAACTGTTTTACACACTTATGCATTCGATAGACATTAGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GAGCCCTGACCGTGTGCCAGGAACTGTTCTAGGCACTGGGGATACTGCTCTGACCTAAACTGATGGAAATGCCT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCCTTCATTGGGCTTGCATCATAGCGGAGACAGTAGATAAAAACATGGAACAGGCCAGCTAATGATGAGTGGTA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGAAGAAAATAAAGCAAGGATGGGAGACAGAGCTGCAGAAGTTGGGGGAGTGGGCTCTTTATGGTGACAGCATC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGGGAAGATGATCCTGACAGGGTGACTTTTTTGTTTTTGAGACAGGGTCTCACTCTGTCACCCAGGTTGGAATG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAGTGGCATGACCATAGCTCACTGCAGCCTCAACCTCCAGGGCTCAAGTGATCCTCACTTAAGCCTCCCAAGTA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GCTGGGACTACAGGTGTGTGCCACCACACTCGGGTAATTTTTGTATTTTTAGTAGAGACGGGGTCTCGCCATGT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGCTCAGGCTGGTCTTGAACTCCTGGGCTCAAGCGATCCACTCGCCTCAGCCTCCCAAAGTGCTGGGATTACAG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GCATGAACCACCACGCCTGGCTCAGGGTGACATTTAAAGACCTGAATGAAGTGAGTGGGAGTCATAGTGTAGGG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GGAGAACATTCCAGGCAGAGAGAAAGCCAGCCTAAAGGCACTGAGGCTGGAGCGCTCCAGAAGGATCATTGTGT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 ATGCCAGAGTCTTGCTGGACCAGAGTGTGACAGTACATGAGGTCAGACAGGCCAGATGCTTCATGGGCCACAGT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TAGGACTTTGGCTTTTTTTCTGAGTGGGGGTGACCAGAAGGTGTCAAGCAGAGGAGGAACATGATCTGACTTGG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TCATAGAGGCTCCCTCTGGCTGCTGAAGGGGACAGATTGGGGGTGGGGGTAGAAGCAGGGGACCCAGCAGGAGA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CCCCTCTGAGCGCAGTGATGGGGACTTGCACCAGGGTAGTGACAGTGGAGGAGTTGGCGGGGGAATGTTGGGTC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GGACCCCCAGGGGGTTCACTATGTTAGGCTGCAGGACTCTGCTGCCTCCTCAGGGGGCGATATTCCCAACCCTT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CTGTGCATTGTGTTGTTTATTAAAAGCAGGGAGCAGAGGTGTTGAGTCCTGGAGCCCCAAGCTGGTGCAGGAGC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AACGGGAAGTTAAGGCTGACCTGGGGCCTCCTGCTGTGTGGCGGAATCTCCATCCCTCAGACCACCCCTGTCTC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CTCCCAGCCCCATCCAGGGTACAAATTCCAGCCCTGGAACAGCTCAGAGACCAAAAAGTGATGTTAAGTATTTG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AGGGGAGCCCCAAGAGAGGAGAAAAAGCTTTGAGTATTGATGGGGGTAAATAACCAAAATCACTTATCAGTGGC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CTGCGTCACCAGAAAATGTCAAAGTTACCTGAAGCAGCAAAGAGGCTCTTGCTCCGGCCCCTCCCTTCCTTCTC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 AGCTCCATTTGTTGCCACATATGCGTTGACTGGAACTGCGACTGACATCTTGGGACCTTAGGGTCAGTCCACAG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CGTGGTAGAGACTCCAGCTTGGCCCAGCATTGCTGAGCTGCTGAACTCGCACCAACAGTCTTGTTGGAGGGAAA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 TAATCTCCCGTTTGTTCAGTCCAGTTATTTGACAGTGTGGTTACTTGCACCCCAAGCATTTCTAACTGGCACTT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CCATCTAATAGACCTCAGGGTACATGGTGGTGAGATAGGGACATCAGTGAGCTGGATTGTTCCCATGGTAAAGG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TCATGTATGTGTGTGTGTGTCATGGTCCTCAATACCAGCCCCAAGCCCAGTGATTTGCTAGGAGGACTCCCAAG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 ACTCAGTATGTGGTTGTATTCATGGCTACGATTGACTTATTACAACAAAAAGATATGGAGCAAAATCAGCAAAA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 AGAAATGGTGTGCAGGACCAACTCCCAGAGAGACCCAGGCACAAGTTTCCAGGGCTTCTCTCTCATTGGAGTCA 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 CACAAGATGTGCTCGGTTCACAGTAATGGGTTGTGACAATACATGCGAAATGTTGCTGACCAAGGAAGCTCAAT 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 TAGAGACTCAGCACCCAGAGGTTTTTTTTGTTGTTGTTGTTGTTTTGGTTTTTTTTTGGCGGGGGGGGGGGGGT 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 CTTGCTCTGACGCCCAGGCTGGAATGCAGTGGCATGATCTTGGCTCACTGCAGCCTCCACCTCCTGGGTTCAAG 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 CGATCCTCGGGCCTCAGCTTCCCGAATAGCTGGAACTACAGGCGCGCACCAGCAAGCTCGGCTAATTTTTGTAT 4440
Query 1 -----------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACC 63
||||||||||.||||||.||.|||||||.|||.|||||||||||||||.|||||||.||||||
Sbjct 4441 TTTTAGTAGGGATGGGGTTTCACCATGTTGGCCAGGCTGATCTTGAACTCCTGACCTCAAGTGATCCTCCCACC 4514
Query 64 TCAGCCTCC----------------------------------------------------------------- 72
|||||||||
Sbjct 4515 TCAGCCTCCCAAACTGCTGGGATTACAGGCGTGAGCACCTGGCTGGTATCAAGTTTTTATTGGGGCATGGTCAC 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 ATAGGCACCCCCTGCCTGGCACCTACCCAAATCCCAGGCTCCCAAAAGGAAAGCAGGGGCTCAGCATAAACCAC 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 CTTTTTTTTTTTTTTTTTAATTGAGACGGAGTCTCGCTTTGTCGCCAGGCTGGAGTGCAGTGGCGTGATCTCGG 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 CTTACTGTAACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCTTCCTGAATAGCTGGGACTACAGGC 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 GCCTGCCACCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATATTGGCCAGGCTGG 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 TCTCCATCTCTTGACCTTGTGATCCGCCTGCCTCGACCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGC 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 TCCTGGCCCACTTTTTTATACAAACAGCTTAGGTAGAGTAAGCCATTCTTTTTTTTCTTTCTTTCTTTTTTTTT 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 TTTTTTGAGACAGGGTCTCACTTTGTTGCCCAGGCTGGAGTGCAGTGGCTCAAACATGGTTCGCTGCAGCCTCA 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 ACCTCCCAGGCTCAAGCGGTCCTGCTGCCTCATCCTCCAAAGTAGCTGGGACCACAGACATGCACCACCATGAC 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 CCCAGCTGATTTTTGCAGAGATGGGTTTTGCCATGTTGCCCAGGCTGGCCTTGAACTCCTGGGCTCAAGTGATC 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 CTCTCACCTTGGCCTACCAAAGTGCTGGCGTTACAGGTGTGAGCCACCACACCCGGCCCGAGTGAGCCATTCTT 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 ATCTCTTAGGGAATGGTGGGAACCCTCCTGGAGTCTATGTTCTTAGACACCACCCAAGGGCCAACCTTGAAGCA 5402
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5403 GGCCTTTCCAAGGATCGCAGTTGAGGCCTGCTCTGTTACTGTTTTTCTGCACAGTGTGCAACACCACACAGATG 5476
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5477 CCCAGTTTCTACCAAGGTCTGTGGATGGCAGGATAATTTTGAGGAACCTCCTTTTTCGCTAACACTTTCTTCTT 5550
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5551 TTGTTTACACTCTTCACATTGTCTATTGAGTCTGGATTCAAGATGATTGATTGTGAATATTGTTGTGCATGATT 5624
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5625 TTGGGGGTTTCCTCCTTGTGAAATTTTGAGGTGGCAGATTTGACATTCTACTTTAAACTCATCTTGGTGGCACT 5698
Query 73 -------------------------------------------------------------------- 72
Sbjct 5699 TTTCTTGACTCACCACCTAAGGGGGAATAAATAATGAAGAAAGAATAAAAATAGTGTTATCAGTCACA 5766
