Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- NR_049742.2
- Aligned Length:
- 5388
- Identities:
- 63
- Gaps:
- 5316
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AATGCTGAGACAGACTCCCAGAAGATCTGAGCGAGTCGCGTAGCTGAGCCCGGCAGGGGCTGGGGTGGTGCTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCTATGAGCTGCACCATCGAGAAGATCCTGACAGACGCCAAGACGCTGCTGGAGAGGCTACGGGAGCACGATG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGGCCGCCGAGTCGCTGGTGGATCAGTCGGCGGCGCTGCACCGGCGGGTAGCAGCTATGCGGGAGGCGGGGACA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCGCTTCCGGACCAGAGCTATGGATTTCCTTGGAGGAACACCAGGATGCTTTGGAACTTATCATGAGCAAATAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGAAACAGATGTTACAGTTAATGGTTGCTAAAAAAGCGGTGGATGCTGAACCAGTCCTGAAAGCTCACCAGTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCACTCTGCAGAAATTGAGAGTCAGATTGACAGAATCTGTGAAATGGGAGAAGTGATGAGGAAAGCAGTTCAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGGATGATGACCAGTTTTGTAAGATTCAGGAAAAATTAGCCCAATTAGAGCTTGAAAATAAGGAACTTCGAGAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTATTGTCCATCAGCAGTGAGTCTCTTCAAGCCAGAAAGGAAAACTCAATGGACACTGCTTCCCAAGCCATCAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATAACTGAACTCTGAATGATGGCTGGAGATTGTCTATCAAGGAAGGAAGTTACTGTCTTCCCATTCAAGTACTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCCATTAAGTGTCTTGCCTCAGATTTGATTTAATCTTAATTAAAGGTATCAGGTGGCAATTTAGAATTCCAGTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AATATTGGCTGTCCACAGTTCTCAGATGTGTTAATGTGAATACTACATGCTGAATTTCACCATTCCTTTCTCAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGAGACTACTTTTAATTTTCATTTCTGGGACCTTGATTTATATAAACTATGTTTTCAGTTCTTTGTTATTTTTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACATCTCTGAAACTTTGAGCATTTTTTATAAGCCAGCAATTTATTTTACATAGCATTGTAAAATACACTTCTAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAAATTTTAGGAAAGATTTAACTGTTTAAATCTATTTGGCATAAACCTTGATTTTTTTTTTCCATTTGACAAAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATAATACAATTCCACAGAACTAGATCAGCAGATTCTCTGATTTGTAATGTCATTCACCTGTGACATTTTAAGTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCTCTGGTGCTAAGAATTGGCACTTTATAGCCTGGTGCCTTTACTTTTAATTTGAGAGAACCTACTGCTAGTCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAGGAAACACACTTGGAAATAAGTCAGCTATTTTTTTTGCCCAGTGATGCTATAGTTGTCATATTGTCCAAAGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCATATTGTTCAAAGCTGAGGAGCTTGTCCTGTGTATGTGAATGCACACATGTGCACTTAGTTCAAATACTAAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGTAGCTTTTATTAAATATAATCAGCCAAAAACACACACAAAATAAAAAAAACAAATATAAGTAGTCAGTTTTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CAATGTTATCCTACTAGTTCTACATTCTATTTTAATTTTTATACAATTTCCATTTTATAGTTAAGAACCATCAC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTACTTGGATTGGATGTCTTTCATTCCTAGCACTAATAGTTGGCTTTCTTTTTTTTTGTTTACATAGAAGCAGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTTTTTTTTTATCTTTTTTCTTTTTTTTTGTTTAAGCTATATAAAAAGGTGAGGAAGCAGTTTTGTTACCTAAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAAAATTATTACACTCATAATGCTGTGTAGGCAACATTGAGATTCAAATGCCCAGTGGTCAACTGGGTTCACTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATCAACTCATTCCCGTCCCAGTTTACTCACATTTCAAATTTATAAATTTCTTCATGTTATACTATTCTATTTAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATTTGCCCAGAATTAGTTGAAATAATGCTAAACCTGTCAATATTTTCCAGTAACATTAAGCACCATACTGCATG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGAGAGACACAGTACTAAAAAGAGTTGTTAGTGCTTTATGTGAGTGATATTTCTTTCGTAATGCTATAAAGAAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TACAGTTAAAATAACAAAATATTTTAAAGATGTCCTAAAAGCATCTGATCCCAGTAATAACTAATGGATGTCAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTAGAGCAGTGGGTGTTAATGAATAGGTATATGTCATTTAAGAATTTTTCAAATTTCTGTTTGATATCCTGCAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGAATTTGACAAAAAAAACACTTCCAAGTGTGAGCATTTTTTATTTCATTTCCCAAGAGTAAGTAAGTAACTAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TAGCCCAGCCATCTGCCTCGAAGTATACCTTAAGTGACCCCATAAATCCATTCAAGAGGCAGGTACTCTATACC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ATTTGGCAGCCACGGCCAAACCTACCATGGCCAGATTTCAGTGAAAATGATGAAGTAATCAAATCAAGGTATAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TATGGTGTCCCTTTATGTGCTTTATGTTCCTTTAGAGCTGTTTATAAAGTTCTTTATATCTCAAGTGTTAGGAT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAATCGACATACTAACTTTTCCCCCTGCAAAATTAAAAGCCTGAGGTACAAGTCTAAGAAGCTTTTAGTGCTCT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACATAATATAAATTCTGGCTGGTGTTAATGCTATGAAGATAATATGTAGTTAGAAAATTGAGTCGGGGAGGAAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCTCTTCATTTTAAGTGGATTTTAAAGTTTCTCCTTGAGTGGATGAAGAACTTGCCTGGTTTGCAAAAATCTTA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GTTCAAAATTATATTTTCTAACAAAAACTGCATTTTGAGAAGATAAGCTAATTTTACTCAGTAGTAAGTCAAAT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GAGGAAGTGCAGAGGGTTTTTTTACATATATATAGCAACCTTGTCAAGTGGTCCTCACAAGAGTCATAAATACT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTGTAATTAGCACAGTATATTCAGCAGTGTATAACTCTACAAATAGTACCTTATATTAGTGTAGTATTATATCA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ATATCTTATGTATAATTCTTATATTAATACCTTATGCATAATTGGATTCAAACATTGAAGGTCTATTTTAGTGT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TCTTCAAAATGTGCTTCCCTGACCTACTGAAATAGAAACTTGGTGATGAAGTTCAAGAATTTGTATTCTAATCA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TCTCAAACAATTCCTAAAGACACTGATTTTAAAATATCTAGTCTAGGCCCCATTGTGTAATAGTTAGCACTCTA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AAAGATGAAAAAGAAAATAGTCTATGTGCCAACCACTTCATTAGTACTTATGAATTTAAAAATGAAAAAGTCTG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GTACAGGAGACAAGTATATATATAAAATTATAATGCAGTGTGATAAATCCATTATAGTATGTATAAGATACAGA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AGAGGGACTTTAAACTTGAGAATTCAATAGAGATAATAAATGGGTAGGAGGGAAATAGAAAACTTTGGTGCCAC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AAAAGCAAAGTATGTATGGTATTGCCAATAATAGCTACCATCTATTGAGTGCTTTACTACCTGTCAGGTACTGT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 ATTATATAAACTCCATTTTAACTGTACCTCATTTTGCAGATACTCAGGCACAAGGAGGTGGTTATTTGTCCAAA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CTGGAACCAAGATTCAAACCCAGACAGAGTCTTAAGCACATTTTTAATCACTAACTAACTTGAGATGCCTAAAT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 GCCAAATACTGTTGGGAGTTCAAGTGGTTCTTGATTAGCAAAATCTATTTTTATTAGTGCAAAAGAAACACCAC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 AGCTTATAAAGTATTATGAATTCAATAAATGGAGTCTTAACTAATGAGATATTATTTTCTAGAATGGTGTAGCT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GAGAGTATGTGTGATTCAACTGAAAGGAATAATGTTTAATCAGTGACTCTTACTATATACAGGAAAAGGTGCAG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TTCTGTCTTTCAAATCTGCCTCCTTACCATATTGGCTTACATCCCTCATGCTGTTTTCTTGTGTTTGCTAGAAA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GTTGTTGCCAAGCCAAATGTCATGGCCATGTTGAAGGCAAGGAAGAAAAAATGGAAATGGCCTGTGCCAGCTAT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 ATATATCGCCTTTTATGAGGGAAAGCAAAGCTTTCTCAGAAATCCCAAATGGATTTTCCCTTGACTTAATTGCC 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TGACCAGTTAAATGGCCACTGGTACCTGCAAAGAAAGCAGGGTACATAGCTGTCCCAAATAAAATCAGTATTAG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 CAAGAAGAAAGAATATTGAGAAAGCAATTAACAGTGTCTGTGACTGTGACATGTCTGTGACTTTATATTGTCAA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GTCCTTTCCCCTTGAATATAGTTTTGGAAGAATTAGCTGAAGGAGTGTGTTGACATTGAATGGCCAAGAGAATG 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 GGCTGTAGCAGACATCTGTCATTTCTCTTTTGGCTGCCCAGTATCCTAACTCCTGTGTTTAAGGAATCCCTCAC 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 CTAATGAGGCAGAGCATTTCTTCCTCCTAAAGAATTTGAAAGTACCAGGTAATGTTTTCTCAGCCTCCTTTTGC 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 AGCTAAGGAAGAAACATCTGCCTTCAATTTTAAAATTAGTGATACAAAGAAGGAGGGAACCATGCAGATTCCTT 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 TGAAGATGGTGATTAACAACACTACTGCATTCATCTCCACAGAGGTACAGCAAAAGTGATTTAGTTAGCGATAA 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 CCTCTAATTCTATTTTTTTATTTTTATTTTTTGAGACAGTCTTGCTCTGTCAACCAGGCTGGAGTGCAGTAGCA 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 CTGTCTTAACTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTCGCTGGG 4588
Query 1 -------------------------------------------------ATGGGGTTTCTCCATGTCGGTCAGG 25
|||||||||||||||||.||.||||
Sbjct 4589 ATTACAAGTGCCCACCACCATGCACAGCTAATTTTTGTGTTTTTAGTAGATGGGGTTTCTCCATGTTGGCCAGG 4662
Query 26 CTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC--------------------------- 72
|||||||.|||||..||||.|||||||||||||||.|||..||||||
Sbjct 4663 CTGGTCTCGAACTTATGACTTCAGGTGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGC 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 CACTGTGCCTGGCCTGTAACCTCTAATTCTTGTTTGCTGGCTGTCCTAGAGATCCTGAGAATTACTTTTAATAA 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 AATCATTTTTTTGCTGTTATTAAAACTAACCTGAATTGCCTAAAACCAAGAACTCTGCTTGATAAAATAAGCAT 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 AGTTTTAGGAACAGCCATGCAGATATAAATTTTATCAACACTTTATACATAATTTGGGACTTATATTTAAATGT 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 AATATTTGATGCTTATAAAAGGGTAAATGGGGAATGCAAATAAATTATCAAGCATAATAACTCATCACCTAACT 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 TAAGAATAACATTATGAGTGCTTGTATTTTATCTATTTGAGCTCTTCTCCTATCTTTGCCGACCCCCCCGCTCT 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 CTTTTTAATAGATTTGTTCGAATGTAGAAAGACCTAAAATACATATGTATCCCTAAAGTGACTTATTTTATAGT 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 TTTCTTTCTTTTTGAACTTCAAAAAAATTGTATCATACTCTATGTAGTCTAAGGATTTGGTTTTTTTCACTCAA 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 CATGTCTCTAGAATTCACAAGTTTTATTGTTTTATAGCTGTCATTTTCATTGATGTATATTTCATTGTTGGGTT 5328
Query 73 ------------------------------------------------------------ 72
Sbjct 5329 ATACAACATATTGTTAAGGAATACATACATATATAATAAATTATACATTTTTTAAAAAAA 5388
