Nucleotide Global Alignment

Description

Query:
TRCN0000492083
Subject:
NR_049742.2
Aligned Length:
5388
Identities:
63
Gaps:
5316

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AATGCTGAGACAGACTCCCAGAAGATCTGAGCGAGTCGCGTAGCTGAGCCCGGCAGGGGCTGGGGTGGTGCTGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCTATGAGCTGCACCATCGAGAAGATCCTGACAGACGCCAAGACGCTGCTGGAGAGGCTACGGGAGCACGATG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGGCCGCCGAGTCGCTGGTGGATCAGTCGGCGGCGCTGCACCGGCGGGTAGCAGCTATGCGGGAGGCGGGGACA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCGCTTCCGGACCAGAGCTATGGATTTCCTTGGAGGAACACCAGGATGCTTTGGAACTTATCATGAGCAAATAT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CGGAAACAGATGTTACAGTTAATGGTTGCTAAAAAAGCGGTGGATGCTGAACCAGTCCTGAAAGCTCACCAGTC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCACTCTGCAGAAATTGAGAGTCAGATTGACAGAATCTGTGAAATGGGAGAAGTGATGAGGAAAGCAGTTCAGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGGATGATGACCAGTTTTGTAAGATTCAGGAAAAATTAGCCCAATTAGAGCTTGAAAATAAGGAACTTCGAGAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TTATTGTCCATCAGCAGTGAGTCTCTTCAAGCCAGAAAGGAAAACTCAATGGACACTGCTTCCCAAGCCATCAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ATAACTGAACTCTGAATGATGGCTGGAGATTGTCTATCAAGGAAGGAAGTTACTGTCTTCCCATTCAAGTACTG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TCCATTAAGTGTCTTGCCTCAGATTTGATTTAATCTTAATTAAAGGTATCAGGTGGCAATTTAGAATTCCAGTC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AATATTGGCTGTCCACAGTTCTCAGATGTGTTAATGTGAATACTACATGCTGAATTTCACCATTCCTTTCTCAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGAGACTACTTTTAATTTTCATTTCTGGGACCTTGATTTATATAAACTATGTTTTCAGTTCTTTGTTATTTTTC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ACATCTCTGAAACTTTGAGCATTTTTTATAAGCCAGCAATTTATTTTACATAGCATTGTAAAATACACTTCTAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GAAATTTTAGGAAAGATTTAACTGTTTAAATCTATTTGGCATAAACCTTGATTTTTTTTTTCCATTTGACAAAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ATAATACAATTCCACAGAACTAGATCAGCAGATTCTCTGATTTGTAATGTCATTCACCTGTGACATTTTAAGTC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TCTCTGGTGCTAAGAATTGGCACTTTATAGCCTGGTGCCTTTACTTTTAATTTGAGAGAACCTACTGCTAGTCC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CAGGAAACACACTTGGAAATAAGTCAGCTATTTTTTTTGCCCAGTGATGCTATAGTTGTCATATTGTCCAAAGT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TCATATTGTTCAAAGCTGAGGAGCTTGTCCTGTGTATGTGAATGCACACATGTGCACTTAGTTCAAATACTAAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AGTAGCTTTTATTAAATATAATCAGCCAAAAACACACACAAAATAAAAAAAACAAATATAAGTAGTCAGTTTTT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CAATGTTATCCTACTAGTTCTACATTCTATTTTAATTTTTATACAATTTCCATTTTATAGTTAAGAACCATCAC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TTACTTGGATTGGATGTCTTTCATTCCTAGCACTAATAGTTGGCTTTCTTTTTTTTTGTTTACATAGAAGCAGG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GTTTTTTTTTATCTTTTTTCTTTTTTTTTGTTTAAGCTATATAAAAAGGTGAGGAAGCAGTTTTGTTACCTAAT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GAAAATTATTACACTCATAATGCTGTGTAGGCAACATTGAGATTCAAATGCCCAGTGGTCAACTGGGTTCACTC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ATCAACTCATTCCCGTCCCAGTTTACTCACATTTCAAATTTATAAATTTCTTCATGTTATACTATTCTATTTAG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  ATTTGCCCAGAATTAGTTGAAATAATGCTAAACCTGTCAATATTTTCCAGTAACATTAAGCACCATACTGCATG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GGAGAGACACAGTACTAAAAAGAGTTGTTAGTGCTTTATGTGAGTGATATTTCTTTCGTAATGCTATAAAGAAC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TACAGTTAAAATAACAAAATATTTTAAAGATGTCCTAAAAGCATCTGATCCCAGTAATAACTAATGGATGTCAT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CTAGAGCAGTGGGTGTTAATGAATAGGTATATGTCATTTAAGAATTTTTCAAATTTCTGTTTGATATCCTGCAT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  AGAATTTGACAAAAAAAACACTTCCAAGTGTGAGCATTTTTTATTTCATTTCCCAAGAGTAAGTAAGTAACTAT  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TAGCCCAGCCATCTGCCTCGAAGTATACCTTAAGTGACCCCATAAATCCATTCAAGAGGCAGGTACTCTATACC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  ATTTGGCAGCCACGGCCAAACCTACCATGGCCAGATTTCAGTGAAAATGATGAAGTAATCAAATCAAGGTATAA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TATGGTGTCCCTTTATGTGCTTTATGTTCCTTTAGAGCTGTTTATAAAGTTCTTTATATCTCAAGTGTTAGGAT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  AAATCGACATACTAACTTTTCCCCCTGCAAAATTAAAAGCCTGAGGTACAAGTCTAAGAAGCTTTTAGTGCTCT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  ACATAATATAAATTCTGGCTGGTGTTAATGCTATGAAGATAATATGTAGTTAGAAAATTGAGTCGGGGAGGAAT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GCTCTTCATTTTAAGTGGATTTTAAAGTTTCTCCTTGAGTGGATGAAGAACTTGCCTGGTTTGCAAAAATCTTA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  GTTCAAAATTATATTTTCTAACAAAAACTGCATTTTGAGAAGATAAGCTAATTTTACTCAGTAGTAAGTCAAAT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GAGGAAGTGCAGAGGGTTTTTTTACATATATATAGCAACCTTGTCAAGTGGTCCTCACAAGAGTCATAAATACT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TTGTAATTAGCACAGTATATTCAGCAGTGTATAACTCTACAAATAGTACCTTATATTAGTGTAGTATTATATCA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  ATATCTTATGTATAATTCTTATATTAATACCTTATGCATAATTGGATTCAAACATTGAAGGTCTATTTTAGTGT  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TCTTCAAAATGTGCTTCCCTGACCTACTGAAATAGAAACTTGGTGATGAAGTTCAAGAATTTGTATTCTAATCA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  TCTCAAACAATTCCTAAAGACACTGATTTTAAAATATCTAGTCTAGGCCCCATTGTGTAATAGTTAGCACTCTA  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  AAAGATGAAAAAGAAAATAGTCTATGTGCCAACCACTTCATTAGTACTTATGAATTTAAAAATGAAAAAGTCTG  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GTACAGGAGACAAGTATATATATAAAATTATAATGCAGTGTGATAAATCCATTATAGTATGTATAAGATACAGA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  AGAGGGACTTTAAACTTGAGAATTCAATAGAGATAATAAATGGGTAGGAGGGAAATAGAAAACTTTGGTGCCAC  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  AAAAGCAAAGTATGTATGGTATTGCCAATAATAGCTACCATCTATTGAGTGCTTTACTACCTGTCAGGTACTGT  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  ATTATATAAACTCCATTTTAACTGTACCTCATTTTGCAGATACTCAGGCACAAGGAGGTGGTTATTTGTCCAAA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  CTGGAACCAAGATTCAAACCCAGACAGAGTCTTAAGCACATTTTTAATCACTAACTAACTTGAGATGCCTAAAT  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  GCCAAATACTGTTGGGAGTTCAAGTGGTTCTTGATTAGCAAAATCTATTTTTATTAGTGCAAAAGAAACACCAC  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  AGCTTATAAAGTATTATGAATTCAATAAATGGAGTCTTAACTAATGAGATATTATTTTCTAGAATGGTGTAGCT  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  GAGAGTATGTGTGATTCAACTGAAAGGAATAATGTTTAATCAGTGACTCTTACTATATACAGGAAAAGGTGCAG  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  TTCTGTCTTTCAAATCTGCCTCCTTACCATATTGGCTTACATCCCTCATGCTGTTTTCTTGTGTTTGCTAGAAA  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  GTTGTTGCCAAGCCAAATGTCATGGCCATGTTGAAGGCAAGGAAGAAAAAATGGAAATGGCCTGTGCCAGCTAT  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  ATATATCGCCTTTTATGAGGGAAAGCAAAGCTTTCTCAGAAATCCCAAATGGATTTTCCCTTGACTTAATTGCC  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  TGACCAGTTAAATGGCCACTGGTACCTGCAAAGAAAGCAGGGTACATAGCTGTCCCAAATAAAATCAGTATTAG  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  CAAGAAGAAAGAATATTGAGAAAGCAATTAACAGTGTCTGTGACTGTGACATGTCTGTGACTTTATATTGTCAA  4070

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4071  GTCCTTTCCCCTTGAATATAGTTTTGGAAGAATTAGCTGAAGGAGTGTGTTGACATTGAATGGCCAAGAGAATG  4144

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4145  GGCTGTAGCAGACATCTGTCATTTCTCTTTTGGCTGCCCAGTATCCTAACTCCTGTGTTTAAGGAATCCCTCAC  4218

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4219  CTAATGAGGCAGAGCATTTCTTCCTCCTAAAGAATTTGAAAGTACCAGGTAATGTTTTCTCAGCCTCCTTTTGC  4292

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4293  AGCTAAGGAAGAAACATCTGCCTTCAATTTTAAAATTAGTGATACAAAGAAGGAGGGAACCATGCAGATTCCTT  4366

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4367  TGAAGATGGTGATTAACAACACTACTGCATTCATCTCCACAGAGGTACAGCAAAAGTGATTTAGTTAGCGATAA  4440

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4441  CCTCTAATTCTATTTTTTTATTTTTATTTTTTGAGACAGTCTTGCTCTGTCAACCAGGCTGGAGTGCAGTAGCA  4514

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4515  CTGTCTTAACTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTCGCTGGG  4588

Query    1  -------------------------------------------------ATGGGGTTTCTCCATGTCGGTCAGG  25
                                                             |||||||||||||||||.||.||||
Sbjct 4589  ATTACAAGTGCCCACCACCATGCACAGCTAATTTTTGTGTTTTTAGTAGATGGGGTTTCTCCATGTTGGCCAGG  4662

Query   26  CTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC---------------------------  72
            |||||||.|||||..||||.|||||||||||||||.|||..||||||                           
Sbjct 4663  CTGGTCTCGAACTTATGACTTCAGGTGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGC  4736

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4737  CACTGTGCCTGGCCTGTAACCTCTAATTCTTGTTTGCTGGCTGTCCTAGAGATCCTGAGAATTACTTTTAATAA  4810

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4811  AATCATTTTTTTGCTGTTATTAAAACTAACCTGAATTGCCTAAAACCAAGAACTCTGCTTGATAAAATAAGCAT  4884

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4885  AGTTTTAGGAACAGCCATGCAGATATAAATTTTATCAACACTTTATACATAATTTGGGACTTATATTTAAATGT  4958

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4959  AATATTTGATGCTTATAAAAGGGTAAATGGGGAATGCAAATAAATTATCAAGCATAATAACTCATCACCTAACT  5032

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5033  TAAGAATAACATTATGAGTGCTTGTATTTTATCTATTTGAGCTCTTCTCCTATCTTTGCCGACCCCCCCGCTCT  5106

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5107  CTTTTTAATAGATTTGTTCGAATGTAGAAAGACCTAAAATACATATGTATCCCTAAAGTGACTTATTTTATAGT  5180

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5181  TTTCTTTCTTTTTGAACTTCAAAAAAATTGTATCATACTCTATGTAGTCTAAGGATTTGGTTTTTTTCACTCAA  5254

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5255  CATGTCTCTAGAATTCACAAGTTTTATTGTTTTATAGCTGTCATTTTCATTGATGTATATTTCATTGTTGGGTT  5328

Query   73  ------------------------------------------------------------  72
                                                                        
Sbjct 5329  ATACAACATATTGTTAAGGAATACATACATATATAATAAATTATACATTTTTTAAAAAAA  5388

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