Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- NR_103504.2
- Aligned Length:
- 6059
- Identities:
- 64
- Gaps:
- 5987
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAACCCTCAGGGACCTGGTATAGACGCAGAATCTGTTTCACACAACAACTGCTATTTGAAGGAAAAAAAAAAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAAGCAAATGATACCAAGACAAGCTCATAACAGAGATCCAATCAGCAGATGTGTACGGATGAAAATACAGTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GATGAGTCAGAAACCGGCCAAGGAGGGTCCCAGACTCTCCAAAAACCAGAAGTACTCCGAACACTTCAGCATAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACTGCTGCCCGCCGTTCACCTTCCTCAATTCCAAGAAGGAGATAGTGGATCGGAAATACAGCATCTGTAAGAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCTGCTTCTACCAGAAGAAAGAGGAGGACTGGATCTGCTGCGCCTGCCAGAAGACCAGAACCAGCCGCCGTGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAAGTCCCCTCAGAGGCCCAAGCAACAGCCAGCTGCGCCCCCCGCGGTGGTCAGAGCGCCAGCCAAGCCACGGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCCTCCGAGGTCTGAGCGTCAGCCACGGTCCCCTCCGAGGTCTGAGCGTCAGCCACGGTCCCCTCCGAGGTCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGCGTCAGCCACGGTCCCCTCCGAGGTCTGAGCGTCAGCCACGTCCCCGCCCAGAGGTCCGACCACCGCCAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAAGCAGCGTCCCCCTCAGAAGTCCAAGCAACAGCCGCGCAGCAGCCCCCTCAGAGGGCCAGGCGCCAGCCGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGGGGTCCCCCGTCAAAGCTTCTAGGTTCTGATTGAAAAGGAAGATCAGGCCAACCCCAAAGAAGAAGTGACCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGGAGGAGTTTAAACTGAATGAACAACCTCGGCTCCTGGACTCATTGCTTCACAACCCATCTACCCCTGGATGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGTTATCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTGACCTCTATAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTGCCACTGAGAGATCTGCTGTCAGTCTGCTTATCCTTCCACGGACTCAAGTTTCTTCAATCTGAAGATACATG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCTTTCTCCAGGGACATGTGGAAAAAAAAAAGATGTTATACAACCATCAAAGTGGCAAAAATAAAAAAAATCAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTATTGGCAAAGATGTGGGGAAAATTCTCATAAGCTACTGATGAGAATTTATAAATTATTATGACACCTTTGGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTGCAATCTGGGGATACTGGCAAAGCAGAAAATTGTACAACCTGTGATCAAGCAATAATAATTTTAGGCACCCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCCTAGAGAAAACTTGAATTCATAGAAAAAGTAGGTACACGTAAATCTGTTCAAGGAATCATTGTTTGGCATTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAAATAGGAGAGAGATCATGAGAAATTACCAAAATGTCCACCAATAGAATGAGTGAATCACCTGTGGTATATTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATAAATAAAAATATTAAATAGAAGGTAAAACAAATCAGACATACACACATTAGATAGATAAATTTAGAGGACAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AATAAGGAACATGAAAAGCAAATAGTAGATGGCAAATGTAATATAATATACTATGCATAAATTTTAACAACACA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAATATTATATTGCATATTGCCCAATAAGCAGAAGCCATAAGGTCTCACACTTTTCTTATAATGCAATAGAATA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAAATGACAACAAAGTAAAAGGGTATCCCAAAAATAAAACTATCCTTTTGGAAAAAAAAAGATTTAAAATAATT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCTGGTTTGAAGAAATAACAAATTAAAAGCTATATATAAACGGTTAACAATATTAGGTGGACATATTTGTTTGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGAGATAGGTGAAAGATAGTTGAAAAGCCTGGGGGTATATTCAAGGTTATATGTCTTAGAAAACAAAAATACTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTTTGGGTTCAGTTTTGGATCTGGGCTTGTTCTTGTGGCTTCTGATGATTTCTGACTTGGGGAAAAATGGGGAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GAGTTGAAATACGTCCTTCCACCCAAACCTTTGTTTAGTAATAGGTAGGAAAATGAAGAAGAAAATAGAATGTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCAGAATGTGGAGGGATGTAAAATGGACAGTACTAGGGTAGAGGGGAAGTCAGATTAGAGGAAAGAAAGAGCAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CAGGAACAGTCTTGTGCTAGGAGCTGGTGTGGCCAAGCACAGTCGGATGCCCAAAGATCCAACAAGGCCATGGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCTGTGTCCTTGAGTGGGCACAACCATTCCTAGCCAAGTTTAAGAGGCAAGTAAAAATATAGGGGCAATGTCAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ATGAAGTCTTGTTCAGGGTATGGGGCTAGGATGAGAGAGAATGCCACAGAGTATGAAGGAAGAGTGATAGATCC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGATGAGATACAGCTCAGAGTGCCACGCCCCCAGAAAGAGGAATCAGGCAAGTACTGTCCCAAGGCAGCTGGAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGTGAGGGCTGAGTGCCCTGGCTTCCTCACTTGGGGAGACCATGGGTCTCTGTAGAAATTCCAATATAAAGGCA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGGAAATTTGACTGCATGGAGTCTTCAGGTAGAAATGTTTCTCTTGCCTAAATTCAGGTGCTAAATAAACAACA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AAATGGTAACCTCTACTATGAAGTGTTTCCAATGATGGGATATCTGAGGCCATTACATTCCTGGGAATAACATG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GTGAGGTGCAGGGTGGTGGTGGTGGTGAAACATACGACAGACCACTGTAAGTGAGAACAAATTACTGGCCCAGC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CCAACCCACACCAAATAAGAAATTTAATATCCCTTTGGCCTGTTTTAGATTTTGGCAAAGCCAGGCCCATAGTG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CTTGCTGGGCTCTCTCTTCCACATCATCCAGAAGACACACATTTGCTATGGAATGATTGTGGAGGTGAGAGTAT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AGTGCATATTAATTCATGCAAAAAGTTAGATATTAGCCCAGAAATGTTAGTAACAAGAAACTACTGAATTCTCT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GTTTGTCTGTTGTGGAAATAAAACCTTCTGGGGATGAATCAAAACTATCTGACAATTACTTGAAATGGGTGAAT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AGCTAAATGTAATGTGCCTTGGATATTATAACTAAAAGGTGCTATAATCCAGTTATATTTTTTATCTTTTAAGG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ATTGGTTCTGAGGAGCACTACCAGTAAATATTGCAAAAATTACATAAAGCTCCAAAAGCTACTCTGTGTAAACT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TCTTGAGTGGGAATTCTCAACCATAATATCTGGAATATGACTGATAATTCTGGATGTTAACTGATTTTATGTTC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TGATGTTTTGACTGGTTTTGGGAAAAATTTTGGGAAAAAAGAGTTTTCCTCGTAAATACCCAACAACTGGGTCT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CTGGGTAAAAAGGCCTAATTTATAGAGATTGCTAATTTCCATGGTGTAAATATTTCCACAATGCAGATTCCTTC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CTTCCTTTTTTTTTTTTTTTTTTTTGAGATGGAGTTTCACTCTTGTTACCCAGACTGGAGTGCAAAGGTGCGAC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CTTGGCTCACTGCAATCTTCACCTCCCGGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CAGGTGCCCACGACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGATAGGGATTCACCATGTTGGCCAGGCTG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GTCTCAACCTCTGGACCTCAGGTGATCCACCCGCCTCGGCCTCCTAAAGTGCTGGAGATTACAGGCATGAGCCA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CCACGCCCGGACCATGATGCAGATTTCAAGCTATGAACATGATTCTCTGGAGTTTACCATTTGTCTTTTAATTG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 GCAAATTTGATGCAGAATTGGGAAGAGAAGCACACAATTGACTCTCGTCAGCTGGCACAAGCTGGTGCCAGTGC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 ACCACTGTATATATCCATGGCCCTCTGTGAAGCTAGAGTTTACTACTAAAATTTGTGCTCCATAAATATACAAA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GGCACTAGTAAGAGAAAAAATATAAAGAGAATATAAACTAAATTCAAATTAGGGAGCTCAAATGGAGAAAATTG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 ACAGATAATATTTTTGAAACTTTGAAAAGTAGTATTTGTCTAGATTCACCTTTTATTACCTTTTCCTTTTTTTC 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TTTTCCTTTTTTTTTTTTTTTTGAGACGGAGTTTCTCTCTTGTTACCCAGGCTGGAGTGCAATGGCACGCAATC 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 TCAGCTCATTGCAACCTCGGCTCACTGTAACCTTCACCTTCCGTGTTCAAATGATTCTCCTGCCTCAGCCTTCC 4144
Query 1 ---------------------------------------------------------------ATGGGGTTTCT 11
||||||||||.
Sbjct 4145 GAGTAGCTGGGATTACAGGCACCCACCACCATGCCCAGCTAATTCTTTGTATTTTTAGTGGAGATGGGGTTTCA 4218
Query 12 CCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------- 72
||||||.||.|||||||||||.||||.||||||||||||||||||.|||||||..||||||
Sbjct 4219 CCATGTTGGCCAGGCTGGTCTTGAACCCCTGACCTCAGGTGATCCACCCACCTGGGCCTCCCAAAGTGCTGGGA 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 TTACAGGCATGAGCCACCGCGCCCGGCCTGTTATTATCTTTTATTAAGCAAACAGCGTATCTATGTATCATACT 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 GAGTGTTCTGAGCTGTTAGTTTCTTTGGTGTTCATCTAGATGGAAGCTGGGGCTTCCTTCCTTTCAGATATTGG 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 TGCTAACATGAAGCTGACCAAAGAATTGATGGGATCTGCACACTGTAAAGCCGGTTTCAGGATGGCTGAGCTGA 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 CGGTCAAGAAAGAAGAGAAGATATGAGCCGCCTGCATTTTGGGGTGGTGGCAGTGAAATTTAGACTTGTGATTT 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 GGTATGACAATATATGGCTTTTTGTGATTGTTAACATTAATGAAAACAAGAAAAATTAGTTGCTCAAAAGTTGA 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 AAAATGGATTCATAAACTTTTTATTAGAGTAAGGCAAAAGAACATATTAAAATAGAGGTAAATTAGAAATGTCA 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 ATAAGAACCCATGGACATTTTTTATAAGGAGACTTTATCTGTTCTGTCCCTACAGTGATTTATGCTCTTGGATA 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 TTTTTGCTGTCATCCTGACAAATTCTAGTTGGAATATGGAACAAGCTTATTTGTAGACCTAGTGCCTGTGGCTT 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 CTAAAGCAATTTTCTGAAAAGAGAAACCACTGCCTGTTGGAAGAATAGTTGATTCCATACCTCAAGCTAGGGAA 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 AAAAAATCAGAATTAGTCTGTGAATTCTAGATGTTGAGAGAAAGCAGGGTTTCATTAGGGCATCGGAGAGTCAC 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 AAGTCCATAGGATGCAAAAAGGAAGATGAAATAAAATTGCCTGAAAAACGCACCTGAATTTCTGGCATTGTTTA 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 CTGAAAAGGCTGTGTATTGATGAACCCCAATTATGTGAGGTCTACATTTAAGAGTTTATAATCAACAGTTTGAA 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 AATGCAGGGTGTTGTTTCTTTCTATAAGGAGACAAAACAGTCAGAAGGGAGTGTCACAGGACATTATCACAAAA 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 TCAAAGTTCTCCATGAAATGTGGTTCATTTGCTAGAAAATAATGCAAGCCTATTGGAGAGAATCAGGGCTTCTA 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 GTGATGCTAGGGATGACCTTAAGCATTGTTTGTAAATCACACTTTTTCCTAGTCTTTCAGCAGCAGCTGCACAG 5402
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5403 AGTAGGCCTGCTTCTTCCCATGAAAGCCACACTGAGTTTTATCAACTAGTAGTGTGTGGGCACTATTGCAAGTT 5476
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5477 ATGTTGTGTTGTTTATGGCCATTTATCCAACAGTGCTTTCCTCTGTGCGGGGCTCTGCAGCCTCGTTCTATGTT 5550
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5551 ATTTTTATTACCACGTGTCTGTGCGCCTCAGGTGGCAAAGCAGAATCAGCTTCTCTACCCTCAGCAGGGCTCAC 5624
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5625 TATGACTCACTATAAGGGAAGAAAATCTTACAGATGTCAGAAAATGTTAGGTAAGTGGACAGTGATAAACACAA 5698
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5699 AACAGCAAGTGGTCAGTATCAAAGAGAAAAACAGTATGTTGGTGAAGGAGAAGTATCAAAGCTAGTTAAAAAAG 5772
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5773 TAACAGGAGAAATGTAAAGGGACAATACTCCACAAAAATTTAGATTGTAACTGAGCTTCTTCTCCTAAAGAGAT 5846
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5847 TTAAAAATAAAGTATAGGAAATACATGAAGAAACAAAGTAAAATGCCAAGGTGTAAGTTTGACCATGAATATCT 5920
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5921 AGGGAAAAACATACTTGCACTAAAACAACCAAATATGCAAAAATCAAGTGGAAAAACAGGTCAAAATAATGCCA 5994
Query 73 ----------------------------------------------------------------- 72
Sbjct 5995 GTTGATGTCTGTAAGAACTAAATGTATAATAAAATGAGCAAAAAAAATGGCCAGTTTAACACCAA 6059
