Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- NR_108047.1
- Aligned Length:
- 5658
- Identities:
- 67
- Gaps:
- 5586
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTTTCCGGCGTTGGAGTTGCAGCTTCACCCTCGCAGATTCGGCTTAGCGAGCGAGTCGGTGCTTCCGCGGATCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAATTATTAGCCGTTTTATTAGAGCCCATTAAACGTTGCATAAACATGGTTCAGAGCTGCCTGGGAGAAGAAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCAAAGGATGCCACCCTCTCGATTTATCCCACCCTCGGGAGTCTGAAAGCCGACGCCAGGAGAAATCCCGCGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGGCCGCCCGGGATCCTGGTAGAGGCGACGCTGTGTGCGTTTATGGAGCGCTTGCGGTGCGTGGCACTAGGCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGTGTGGTGGGTGCTGCCGAAAAAAGGGTTCCTCCCATCCATTTGCACGTCACCCTTCCCACCTCCTGCCCAGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGACAGAAGTGAGGACATTCATCGGCCGCATTTTACTAATGGCAAGGAGATAGCGACTGAAGGGCAAGAACCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGGGTTTCCTGTCTTTGATATTTCTCATCTTTGAGAGAAGCCAGTATTTGGAGATGTTTACCCTGCTGTTTTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAGTTGTCCACTTTACTTGATATTGGGACATATCAAGAGACCACTATATGGTCTTGAGTGTAAACTACAGGTAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATTCCTTCCTGCCATCATCGTGTAGCAATAACGCTATTTCCTCCTGATGATTGGATTCATTTACCCCAACTAAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATGGTGACTCTTCCTTGCCTGCTGGTCTCCTAGCACAAGGACCTTGAACCGGGAAACCTCAGCAAGTTAAAGTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TAAAGGATCTATTATTGTGTCTCTTGATGAAAAGGTTCCTCTCTTGGGAATCAGGACTTCTAATTCACAAAGTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCGGGGATGAGAAGTCCAAACTCCCCACTTGGGTCACTGGGAGTGAGAGTATGTGGTTATATTAATTTCCTATC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACTGCTATGACACTACGAACTTAGTGGTTTCAAACAACACAAATTTATTTTCTTACAGTTCTGGAAGCCTAAAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCAAGATATCAACTGGACTGTTTTTCCTGAAGTCTTCAAGAAAAAGTCTGTTTCCTTGCCTTTTTCAATTTCTA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GAGGCTACCTACATTTCTTGGCTCATGGCCCCTTACTCATATCACCCCATCCTCCTGCTTAAGTCATTGCATCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACTAGGCAAATCTGCCTCTCTCTTGTAAGAATCTTTATGATTATATTGGGCCTATTGGATAGTCCAGGATAATC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCTGTATCTTGAGATCATTAACTTAGTCATATCCACAAAGTCTCTTTTATCTTGAAGGTAAAATATTCATAGAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCCAGGATTAGGATCTGAACATATTTGGGGGCCATTATTCAGCCTACTACACAGTAGGAATTCTATTTATATCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTTCATTCCCAAACATGCATGTTATGTATATATGAGACACAGCACCATAAAATGAGTGTTGATTTAGAGTATAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACTGTACCCTGGTGGACAAGGTCATTCCATTTTCACAGGCTATTATCTTCAAGCTTTTGCTTCAGTTTCACCTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAAAAGGGTTTTTCATCATTCCATCAGACCCGCATTTTCTCGGTTATATAGTATGTGATAGGACTAGTGGATCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CATGGTTATGTACCTGCTGATACACCTCCTTTGCTGTAAAGTGCATCCCTAAATCAAAGGCAATATTACACAGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATACATGTTGATGGATCAAATACCTGTAAACCTGTGAGTAGTAGAGCTGGCCAACAACTTATAGGCAAGGAAGT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CAAACTCATACATGCAGATGGGCAGTTTCTAGTCAAGGAGAATCACTGCCCATTCTAGGATGGAAGGAATCCAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CATAAATCAATTTGCTGCCCAAGTAGCTGTTTGGTATCCTTGAGGGTTGGTGCTGTATCAGGAACTTGGTGTTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AACACTGGGGAGTGGCTATTTTGTTGTTGTTGTTGTTGTTGTTTTGTTTTGTTTGAGACGGAGTTTCACTGGTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GCCCAGGCTGGAGTGCCGTGGCGCCATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGGGATTCTCCTG 1998
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 1999 CCTCAGCCTCGTGAGTAGCTGGGATTACAGGCATGCGCCACCACGGCCAGCTAATTTTGTATTTTTAGTAGAGA 2072
Query 2 TGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC--- 72
.|||||||||||||||.||||||||||||||..||||||.|||||||||||||||||||||||||||||||
Sbjct 2073 CGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCAAACTCCAGACCTCAGGTGATCCGCCCACCTCAGCCTCCCAA 2146
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2147 AGTGCTGGGATTACAGACAGGAGCCACCGCGCCCAGCCTGGGGAGTGGCTATTGGATAAGTGGAGGCTATCTAT 2220
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2221 TGGCTTCTTGCTCACTTGCATTCCTGCAAGATGACTACTTTGTCATAAGCCCCCTGTGCCATTCCTGGGGGCGG 2294
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2295 AGGGAGGGGGCGGTGGAGCCGATGGTTGTAGCTGCTGAAGTTTACTGGCTAAATCTGTCTACTTGGTTATTTAA 2368
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2369 TGCTGCTTACATGTTGGATTGTCTCTGGCAGATAAAGATTGTGTTATACAATACAAAAAGCCCTCCTTATGTGC 2442
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2443 CATATCTGATATATTTCTCCTCTGCTTCTCCAGACTTCTTGTCCCTGATATACCAGTCTTATTCCAGACCCCTG 2516
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2517 ATCAACTAGCCAACTTATTTGCCATGAAAATATGTTCTTAGTTCAAGACACTTTCTTTCCACACACAGTTGATG 2590
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2591 ACCAGGAATACTGCCCCACATTATGCCTTTTGGGAGGGTTCTCCTTACTGCTGTCTTTTAAGGCCAGTCCTGTG 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 TGGGGCTGTAGGGCAGTAGCAGTCCATTTTTGTTTTGAACCTATATTCCAAGAAACCTCAGTGAATTCAGCTCA 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 GGCTTTTTTGTCCTCCATAAGCTAGACATGAGAGCCTCCCAAGTGGCCATAATTGTGAGCTGAGGAAGGGACAT 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 TGGTAAAGAATCAGATATGACATGGGAGCCTGACCACCTGCCTTTGCCCAGCTCATGATGGGCCTCTCTGGCTA 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 CATGGTCACTTGATGTCCATAATCAGTTCTTACCAAGGCACATTAGCATGGATAGAGTTGTTTTTGGGATTTTG 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 CACTGCAGATGGCCCAGCCTTGCCACAGAATGCCAGGAGTCGACCTTGTGATTCTCCCATTGGAGCTTGCCTTC 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 AACTTTCATGGCTTCTTATCACATTTACTCTTGTCCCATAGAATATCCTGAATTGGTCCATGCAACAGGGCTAA 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 ATACACCATACCTGCTAGAGAACTTTTACATGCTATGGATCCCACTGAAAACTGGCAGATTTCTATCTCACCCA 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 GTTTACGAGTCAGAACAGTACTGCCAACTTCTGAATTCCCACAGAAGCCTACACAGCTTGGTGTGCTTCCCTGG 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 TGGCAGAATAATTTTGGTGAAATGAGTGGGTGAGATGCAATAATTTGTCCTTTACTGTGAAGGGGATATCTTGG 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 CATTCAAGCAGCCTACTGGGCCCTAAAAGTTTCACTGAGGTAACAGCTTGCTGGGTCTTAAGGATTATTTCCCA 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 TCCTCCAGTGTACAGTATGCTAGCTGCTTATTATTCACCTTATCCAGCTAGCATGATGTCATCAATGTGGTAGG 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 TCATTGTGACATTATGTGGGATGTTTAGATGGTCTAGATCTCTTCGGATTATGACGCAGTGTGGAAGAGTTAAC 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 ATAACCCTAAGCCAATACTATAAATGGGTACTGCTGTCCTATATAAACACAAACTTAATTCTTGTCCAGCACTC 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 TCAGGACCCAGTTCCATACACATGCTCATGGTTCCTGTTGGTACATGTTGGTTAGATCCTGCATCTCTTTGGTC 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 ATATAAGCCCATTTGGAATTGAAAGTAGACACACAGAATGAGGGCAAAACACCTGCAGAACAGCTGCTTCATCA 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 TGGTGGGCTTTTTTCATATTAGGTTTTGTTACCTTTGAGTTTTTAAATTATGTGTAAAGCTTCGATTAAAAAAA 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 TAAAAATTATTAAAAAGAAACTGAGACAGTCTATCCACCTATCTCTATTTACCCAGTGCTGTTGTTGTGTTACA 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 TAAAATTCAATTTTAGCTTCATGTTCATGCAATATTTTCGTTTACCCTTGATTCAACCTTGACCTTTAAAAAGC 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 CAAAAAGACAAATACCTATTTTGACACTGGTTCTGATCTCTCTGAAATTCTGTGTGACCAATGGTCAAGTAACC 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 TTGCAGGTTATTTATCATGTCTAATCTGAAAAAAGTCATTGTATTTACTAATATTTTAATATTCACCTTATAGG 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 TAAGCATTCTAAACATGATTGTGGCAAGAAATTCTTATATGCTTTACATGTTGAAATTCTGTGTCAAATGAAGT 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 ACATATGTATATTATTGCAAGAGTGAATTTCTTCAGTAATGATTGTGACAGCTAGTAAATTTAAGTAGAAAGTA 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 ATTATAAACTTCCAAATACTTTTTTTAAATGGGCAAAATATATGAAACAATGGCCCTGAAGGCATTGGACATAG 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 GCAGTGAAGGATAGTAATCCATGAGAGATGGAATGCAAACAAGGTGAGCAATACAATTGCTCCAACTTGCTGCC 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 TGAAGAAAGGCTTTGGCATGGGGAGAGGGAACCCAGAAGACTCTGTGAGGTGAGGAGATATAAGTGGGAGTCCT 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 GAGAGCCCAAGGCAACTAGAGTTCACAGGGTAGAATACTAGAGAGGACAGAGTGACACAGAGAGAACTCCAGAG 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 ATCTGCTGACCATTCTCCTGAAGTATTAAGCTAAATAATGATTAGTACATGCATGAGAGGAAATAACCAAAGGC 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 TTGGCAAAGAACCATCAGAAAGGATTAAAGAAAACAATACTCAAAGCTCACACAGGATGGTGAATGATTCCTGA 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 TCCCGTCAGCAAGAGTGGAAAAGATCCTAATTCACAAGGCACCAGTTAGAGTACTAAGAAAGGTCTTGCTTCAA 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 TAGCGGGAAAAATTAACCCTCGACTAAATGCTCTAGAATAACCTAACAAAGCTTAAAAGAGAGACCCAAAAACA 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 TTCAAACTGTGTCCAAATAACTTAATCATACTCCAGAAGAAAGTTCAAACTGTTTTAGGGATATGAAAATAATC 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 TACAAAGTAAAATTCACAATGGCTGGCATCCAATCAAAAATTACCAGGCATGCAACAGAAAAATACAACCCATA 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 ATAAGAAAAATAAAACATTCTGGGCTAGGTGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGG 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 TAGGTGGATGACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGCGAAACCCCGTCTCTACTAAAAAT 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 ACAAAAATTAGCAGGGAGTGGTGGTGCTCACCTGTAGTCCCAGCTATTCAGGAGGCTAAGGCAGGAGAATTGCT 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 TGAACCCAGGAGGCAGAGGTTGCAGTGAGATTGTGCCAATGCACTCCAGCCTGGGCAACAGAGCAAGACTCCAT 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 CTCAAAACAAACAAAAAATAAAACATTCTGTCAAAACTGACTCAGAAATTACAGATGATGAAGATTATTAGACA 5402
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5403 AGGACATTAAAACAGTTATTATAATTATATTCCATGTATTCAAGAAACCAGAGGAAAGACTGAAGATATTACAG 5476
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5477 ACAATGAAGGTATAAAAAGACCCGTATCAAACTTCTAGAGATGAAAACTCCAATGTCTGAGATGAAAAATATGT 5550
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5551 TAGATGAGATTAATGGCAGATTAGATATTGCAGAAAGAAAGATCAGTGAACTTGAAGATGCAGCAGTAGAACCT 5624
Query 73 ---------------------------------- 72
Sbjct 5625 CCCTGAAACAGAGAGAAAAAAAAAAAAAAAAAAA 5658
