Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- NR_109996.1
- Aligned Length:
- 3485
- Identities:
- 64
- Gaps:
- 3413
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTAGATGACCCGCCCCCTCGGGCTGTCGGGGGGTCGAGACAGTGGAGTGTTCCTGATGCCAGCTCACGGAGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AATCCAGGGAATTAGGTAATGAACGGTCTACCCATGAAGGGGACCGATTAGTGCCTCTCGCCTGGTCCTGAAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTTTAAATTATTCTTTCAGCTGATGCCAAGAGCCTCTTTTTGGCCAGCACTTACTAAGCACCAGAGACACAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGAAGCAGAAGCATACGAGCACATCAGTGTGATTCTGCTGTGATGAAGGGCAAGAGAGGGCTCACTTTCCGGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTGACATTCAAGCTAGCCCCGAGGCCTGAGCAGGACCCGCCCAGGGGAAGATCTGGAGGAAAGCCATCTGAACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TACAACAAGAGCAAAGGCCTGGTGGAGTCAAGACCACCTTGGCTGCCAGGTGGAATGGTGGAATAACTCAGGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCTGTCAGGTCTCTGAGATGTCAAACGGGCTTGGCACACACCCAGGAGCTCAATGCTGCTGGGAGCTGAGCAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGGAGCAAGGAGCCCTCATCCCCACTGATGAAGAGGCCAGCCCAGGTTCTAGGCTAAGCAGGCCTGTGATTAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAACAGCAGTGTCTCCCTGGACAAGTTTCTTGACCCTGAGAAGAATGTTAGACCATCAACTTTGTGAGGGGACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGCAGTCTCCAACTTTTTTCCTGCTCAGTCCTTATTGCATACTCTTGGAGAAGGTCTACTGACTTGTTCTCAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCCCCACGGCTCAGCCAACCACCCATCCAGCAGAGCATTCAAAAGGCATCTGGAAGGAATGAGGGCGACCGTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGCCAGGCCCCTATTTTTTTTTGAGAGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAATGGCATGACCTCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCTCACTGCAAGCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCCAAGTAGCTGGTACTACAGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CGTGCACCACCACACCCAGCAAATTTTTTCTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGCCAGGATGGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTCAATCTCTTGACCTCGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTGGCTTTTTTTTTTTCTTTTAGATGGAGTCTTCCTTTTGTCGCCCAAGGTGGAGTGCAATGGCACGATCTCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCTCACTGCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCATCAGCCTCCTGTGTAGCTGGGATTATAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CACCTGCCACCATGCCCAGTTAATTTTTGTATTTTCAGTAGAGACGGGGTTTTGCCATGTTGGCCAGGATGGTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCGAACTCCTGACCTAGGGATCTGCCCGCCTTAGCCTCCCAAAGTTCTGGGATTACAGGCGTGAGGCACTGCAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTGGCCATTTTGTTTGTTTGGGTTTGTTTTTGAGATGGAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATGATCTCGGCCCATTGCAAGCTCCACCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCAGAGTAGCTGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GACTACAGGCGTGCGCCACCATGCCCAGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCATGTTAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCAGGATGGTCTGGATTTCCTGACCTCATGATCCGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGCCACCACGCCTGGCCTGTTTGTTTTTTTGAGACACAGTCTTACTCTGTTGCCCAGGCTGGAGTGCAGTGACG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CGATCTCGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCGATTCTCGTGTCTCAGCCTCCCAAGTAGCTGGG 1850
Query 1 ----------------------------------------------------ATGGGGTTTCTCCATGTCGGTC 22
||||||||||.||||.|.||.|
Sbjct 1851 ATTATAGGTGCGCACCACCACGCCCGGCTTATTTTTTGTATTTTTAGTGCAGATGGGGTTTCACCATATTGGCC 1924
Query 23 AGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------------ 72
||||||||||.||||||||||||||||||||||||||..|||||||.|||
Sbjct 1925 AGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCGCCTGCCTCAGCTTCCCAAAATGCTGGGATTACCAGCATG 1998
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1999 AGTCACCACGCCCGGCCAAGAAAGACCCATATTTTGTTTTGTTTTCTTTTTTGAGATGGAGTCTTGCTCTGTCG 2072
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2073 CTCAGGCTGGAGTGCAGTGGCGCAATCTCTGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCCATTCTCCTGC 2146
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2147 CTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCACACCACCACGCCTGGCTAATTTTTGTATTTTTAGTACAGA 2220
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2221 CAGGGCCAGACTGGTCACGAACTCCTGACCTCAGGCGATCCACCCGCCTCAGCCTTCCAAAGTGCTGGAATTAT 2294
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2295 AGGTGTGAGCCATCGCACCTGGCCACCAGACCCCCATTAACTTCAGTAGGGATGGCACCAGGTTTGAGAGGCCA 2368
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2369 AAAGAGATCCAGAGCCAGCAAACAAGACTTAGGTTTGATTGAGGGGAATTTGCATACAGAGCAGTCCAGTGGAG 2442
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2443 GTGGGCTAGATAGGAGAACTGCCCCACCTGCAGAAAGTATGCAGTATATATAGCATTTTCACTTAACACCCTCC 2516
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2517 CCCTAACAACTTTGATTTAACCCAAAACAAAGGGGCTAAATCCCCTGTACATCCACAGGACAGAATGGGGGCTC 2590
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2591 AGATATTCCTCATGGGTAAGTAATGAATCTCTGGCTTGTCCTCACTTGGAACTCCTAACACATTCAGGTGCATC 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 TGCCATACAGGGTCATTCTCAGAGTATGCTTAAGTTATTGCTGTCAGGTGCAGCTACCATACACAGGTGTGTCT 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 GCCATATAGCCACAGAAAGCAGGAGTCCTACAGCTGCTCCTCATGGGTCTCCATAGACTAGTCTTAGAGCAAGG 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 ATGGGCAGCCAGCCTCCAGGTTTAACCTGGCACTCTCCCCCAGCACTTGGTCCCCAGAGCAGGGGTGCATCTCT 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 CCCACTTCTGGTCAACCCTTCAGTAACAAGTAGAGCCCCCAGGGTCTTCATGAATATCTAGTTGAACTGGCTAA 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 AGAAGAGGGCCCTGTAACAGGACAGAACACCAGGAGCCTGAACCCCGCATCTTCTACCCTTATCCTGCATTTAT 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 CCTGCCTGCATTCAAGCCTGTCCAGCTGCACCACTGGAGGTTACCATGGCAACTAAACCCAGAGGCAGCCGGTA 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 ACTGAGATACAGCTGCCAAGAGCAACTGATGGTGGAAAAGGCCAACAGCAGAGACTCTTAGAAGGAAGAGAAGT 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 ACACAGGAGGAGGCCCCAGAACCCTGAGGGTGCTACACTCAAATCTAATCCTACTCACAACTCAGCAGGCAGTC 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 AACGTCTTGCACAAACTGCCATATCACCAACCAGAGGCACAGATATGGACACAATGGGGCCAATTTGCAGAGAT 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 GTTTGCAACTATGGATGCAGAGTAGCACAGGTGGGACACATGTTGTTTAGCCCAAAAGCAACGGGTCTTGGTGA 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 AAACGAAAATGGGTAGGGTACCATTGCTGTTTCCAATGAAACAATGAATTTTGTGTGCTCTTGAAAAAAAAAAA 3478
Query 73 ------- 72
Sbjct 3479 AAAAAAA 3485
