Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- XR_001743944.1
- Aligned Length:
- 4068
- Identities:
- 63
- Gaps:
- 3996
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGAAGTCACTAGGGTGGGCCCTAATCCAACCTGACAGGTGTCCTCATAAGTAGAGGAGATGAGGACACAGACAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGGAGGAAAGACCATGTGGGGACACAGGGAGAAGATGGCTGAGGGGAGAGGCCAGAGGAGAAACCAGCCCTGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCATGTGTTGACCTGGGACTTCCAGCCTCCAGCATGGTCTTTGTCTCTGACAATTTGCCTCTGTGACGTGGATG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGACTGGAAGTCCATTTGGAGCCCTGTCTTCTCCACCTAGGGAGAGAGACCCCATGAGCTCGTCAAGCTCCTTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGTGACTGATCAGAGATCCCACCGTGAGTCCAGCTCCTGGTCCCATGCTCTGGATATATCGGTCCCTGGCAGCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCAACTCCTTAGCCAAAGACGTGGCAACTGCGGGTGAAGTATCTCTGGGCAGGAAATCAATGCAGAAATGCAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGGGGAGAGGGGGCTTGGGGGCCAGTTCCAGGGAGATTGGAACTGCTGTGTTCTCATCAGCAGAAGTGGCCCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGCCCACCCCCATCCTAATCCCTTCTCATGTGGGAGAAGGTCTGTGAGCCCTCTCCCTACCAGGCAGGTTCTAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGCAATGTGGGCACATACCCTGGGGCAGGGGCCGAGGGACTTAACTCACTTCATGAGCGCCAATGGAGGAGCGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGGGAATGCCTGATGAAAACAACATTCTACCAGTATGCACTGTTTTCTAACCTACAGAGTGCCTCTGTGTTCAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGTCCCATTTGAGAATTCTAAGTAGAATTCTGAACAGGCTGGAGCAGATTGCCCACCCCAAGGGACAGATGTTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTGGTACTGTTGGTATTCATGGAAGATTCCTTCTGACACTCCCTCCTTCTTTGTAATTGCCATGAACTGGAGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACTGGGCCAATATAAATCATCCAAGGGTGAACACGCTGCACATGGACGGCTCCTCTTTGTTTTTGAAGGGATTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CATCTCTATTTTGCCATGTGCTCCTTCACCCCACTCCCCACCCCCGTCTTTCATTTCTTTCTCTGGAAAAGATA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTTCAACTCACAGGACTGCGATGTTGAAACGGACACCCAAGAGCATCACAGATGGGCCAGGCCTGGACCTCTCG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGACAACATTCCTCACGACTTTTAGATAGAAGAGATTAGAGATTTGGGACTGGTGGCAACTGGTAACGTTTTCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTGTTTGGTAAACAGCCAGGGTCCGGAGCTCTGGGAACAGCCTGATTTAGCTCTTTGTTTAAGTTTTGTGTTAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGGCTCCCAAGAAGCTGATGCAGGGGAAAGAAATTAACAACCATGGCTCATTCACAGCCAGGCAGCCAAATGGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAGCTCTATAAGACTCAAGCCGACAGCGGAGAGAGTGCAACCAAACAGCCTTGGCCCAGCTTTCAGAGGAGAAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GTTATTCACCCCAACTGCTCTGCATCTGCCTGGATGTCTGCCAAGATCTGTGAGCATTACAGCGTTGGTATGCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTGGGTGAGGCCTGTGGCTATGGCAACAAGTTGGGAGCAACCCGGTCCCTGGGAATGAGAACAGTGTCTAAAAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAGGCAGGCGAGGGGCAGGGAGGAGAGGTAAAGGTTGGACTTGCCTGAAGATGGAGCCGTTTTATTGTTGTGGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TAAAGCTGCTACCATTAGGGGCTGTTTACAGAGTGGGTGCAGCTCAAGCTGGGAGCATGTTAGACTCAGCGACT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ACGATCAACCTATTGACTTGTTCCCATGAGACAGAGTAAATTAACTGTTGCAGTACTGGTCATGTACCACCAAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTCCTGTGAACCAGCCCTCAGTGAAACATTTATGTGAAAGGCCATGGTGTTCCCATAAGAGGGTGCATGTTCTC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCCCTTGACTAACTCTTCAGTATGCCTCATTCTCACGCGCTGGTGTGCAGGAAGGAGTCCAACATGCCCCATTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACAGTCATGCCCTGTATGTGGAAAGTCTTCAGGTAGAGCACTGGGCTCAGGTTTGAAGATGTGAGTTCTAATCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TAGCAAGGCCATTACCTCCCAGTGACCTCATGTCTCGATTTCCTCAACCACAAAACAAAGGCATTGGTGAGCTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ACCTCTAAGGCCTCTCCAGTTCTCACCTTCTGTGTCTCTACAGACTGGAGACTAGAAGATTATGGGCACTTTTA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTGAGTCTTCATTTTGTTTCCATTTCTTTGTAGTCATCAGCTGGAGTTGAGGACAAGTTTTAACAATAGATAGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TTTCTTTTTGTCTCTTTTTAAAAAATTTTATTTAAAATAAATGCCAAGTGTAGTGGCTCATACCTGTAATCCCA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCACTTTGGGGAGGCCAAGGTGGGAGGATTGCTTTTGAGTTTGAGACCAGCCTGGGCAACGTGGTGAGACCCTG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTTGTACAAAAAATTTTAAATTAGCCAGGCATGGTGGCGTGTGCCTATAGTCCTAGCTACTCTGGAGGTAGAGG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CAGGAGGATCCCTTGAACCTGGGAGGTTGAGGCCACAGTGAGCTGTGATTGTGCTATTGAACTCTAGCCTGGGC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AACAGAGCAAGACCCTGTCTCTTAAAAAAGACTATTTTTTAAGAACACTTTTAGGTTCACAGCGAAATTTGGAG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GAAACTTGGCATATGTCATATGCCCCCTGCTCCCATGCATGCACAGCCTCTACCATTAGCAATGTCCCCACTCA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AATGGTACCTTTGTTGTAATCAACAACCCTGTACTGACACATCATCATCACCCAAACTCCATAGTTCACATTAG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GTTTCACTCTTGGTGTGGTGTACATTCCATGGGCTTGAACAACTGTATAATGACATTATCCACCACTGCAGGAT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CATACAGAGTAGTCTCACTGCCCTAAAACTACTCTGTGCTCCACCTGTTTGTCCCTTCTTTCACTCTAAACTCC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TGGCAACAACTGACCTTTTTACTGCCTCGATAGCTTTGCCTTCTTCGGAATGTCATGTAGTTGAAATCATACAT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CATGAAGCCTTTTCAGATTGGCTTCATATAGGTTTCCTTCCTTCCTTCCTCCCACCACCTTCCTTTCTTTCTGT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ATTCCTAACTCTTGGATGTATTTTCCCCAGCATCATGACTTGATGGGACTTTTGCTAAGATAGGCAATCATAGA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AAGTCATAAATCTCTTGTCAGCCTTATTGGCTCACCTCCGAGATGGTTCCAACACTCTTTAAGGCCCACTTTTC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CAATCCACAGATTCCCCAGCAGAAGTCCAAGCTGCTGAGCCTCACATCATCTTTTGCACTAGTAATCTTTACCA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CTACTTCACTGTAGCATTTGAAAATTTTCATATGAAGCCATAGTTCTGTGTCTTTTTTTTTTTTTTTTTTTTTT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TGGAGACGGAGTCTTAACCTGTTGCCCAGGCTGGAGTGCAGTGGCACAGTCTTAGCTCACTGCAAGCTCCGCCT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CACGGGTTCAAGTGATTCTTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCGCCACCATGCCCAGCTAAA 3478
Query 1 ----------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTG 52
||||||||||.||||||.||.|||||||||||..|||||||.||||||||||
Sbjct 3479 TTTGTTGGCATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTTACCTCAGGTG 3552
Query 53 ATCCGCCCACCTCAGCCTCC------------------------------------------------------ 72
|||.|||..|||||||||||
Sbjct 3553 ATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTAAAGGTGTGAGCCACCGCACCTGGCCTGAAGCCATAGTT 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 CTTAACCTCAGTTGTGCAATAGAATTATCTGGGGAATTTAAAAATTAGAAAAAACCCATGCCCTGAAGATTGTG 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 ATCTAACTGGTCTTGCGTAGCGCCTGGGCATTGGTATTTTTTAAATGTTTCCCAACTGATACTAATGTGGCCAT 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 TCTGCAAGCCACAGTTGAAAGGCTTATTCAAGCATCCTGTTGCTGAATGCATGTCGTCCTTACCACATGACTCT 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 GGAGGTTTTCTTGTATTCTGATGTGGCTGCCCTGTTGAGGCCTGCCCCTTAGAGTGGAGATTATCCCCTGCAGT 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 AGGCTGCCTGGAATATGATCCCCAGTGATCCCTGCTTCCTGGTATTCAGGCCCTGGTGTGATCCCTTTCCCTTG 3996
Query 73 ------------------------------------------------------------------------ 72
Sbjct 3997 AAGCCTGGGCTGGATTAGTGACTTGCTTCTAACCAACAGCATATGGCAAAAATAAATGTTTATTGTTTTAAA 4068
