Nucleotide Global Alignment

Description

Query:
TRCN0000492083
Subject:
XR_001743947.1
Aligned Length:
3990
Identities:
63
Gaps:
3918

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TGAAGTCACTAGGGTGGGCCCTAATCCAACCTGACAGGTGTCCTCATAAGTAGAGGAGATGAGGACACAGACAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ATGGAGGAAAGACCATGTGGGGACACAGGGAGAAGATGGCTGAGGGGAGAGGCCAGAGGAGAAACCAGCCCTGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCATGTGTTGACCTGGGACTTCCAGCCTCCAGCATGGGAGAGAGACCCCATGAGCTCGTCAAGCTCCTTCTGTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACTGATCAGAGATCCCACCGTGAGTCCAGCTCCTGGTCCCATGCTCTGGATATATCGGTCCCTGGCAGCGTGCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACTCCTTAGCCAAAGACGTGGCAACTGCGGGTGAAGTATCTCTGGGCAGGAAATCAATGCAGAAATGCAACTGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGAGAGGGGGCTTGGGGGCCAGTTCCAGGGAGATTGGAACTGCTGTGTTCTCATCAGCAGAAGTGGCCCCTGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CACCCCCATCCTAATCCCTTCTCATGTGGGAGAAGGTCTGTGAGCCCTCTCCCTACCAGGCAGGTTCTATGGCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ATGTGGGCACATACCCTGGGGCAGGGGCCGAGGGACTTAACTCACTTCATGAGCGCCAATGGAGGAGCGAAGGG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AATGCCTGATGAAAACAACATTCTACCAGTATGCACTGTTTTCTAACCTACAGAGTGCCTCTGTGTTCACTGTC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CCATTTGAGAATTCTAAGTAGAATTCTGAACAGGCTGGAGCAGATTGCCCACCCCAAGGGACAGATGTTGGCTG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GTACTGTTGGTATTCATGGAAGATTCCTTCTGACACTCCCTCCTTCTTTGTAATTGCCATGAACTGGAGCACTG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GGCCAATATAAATCATCCAAGGGTGAACACGCTGCACATGGACGGCTCCTCTTTGTTTTTGAAGGGATTCCATC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TCTATTTTGCCATGTGCTCCTTCACCCCACTCCCCACCCCCGTCTTTCATTTCTTTCTCTGGAAAAGATACTTC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AACTCACAGGACTGCGATGTTGAAACGGACACCCAAGAGCATCACAGATGGGCCAGGCCTGGACCTCTCGGGAC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AACATTCCTCACGACTTTTAGATAGAAGAGATTAGAGATTTGGGACTGGTGGCAACTGGTAACGTTTTCAGTGT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TTGGTAAACAGCCAGGGTCCGGAGCTCTGGGAACAGCCTGATTTAGCTCTTTGTTTAAGTTTTGTGTTAGAGGC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TCCCAAGAAGCTGATGCAGGGGAAAGAAATTAACAACCATGGCTCATTCACAGCCAGGCAGCCAAATGGACAGC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TCTATAAGACTCAAGCCGACAGCGGAGAGAGTGCAACCAAACAGCCTTGGCCCAGCTTTCAGAGGAGAACGTTA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTCACCCCAACTGCTCTGCATCTGCCTGGATGTCTGCCAAGATCTGTGAGCATTACAGCGTTGGTATGCTTTGG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GTGAGGCCTGTGGCTATGGCAACAAGTTGGGAGCAACCCGGTCCCTGGGAATGAGAACAGTGTCTAAAATCAGG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CAGGCGAGGGGCAGGGAGGAGAGGTAAAGGTTGGACTTGCCTGAAGATGGAGCCGTTTTATTGTTGTGGGTAAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GCTGCTACCATTAGGGGCTGTTTACAGAGTGGGTGCAGCTCAAGCTGGGAGCATGTTAGACTCAGCGACTACGA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TCAACCTATTGACTTGTTCCCATGAGACAGAGTAAATTAACTGTTGCAGTACTGGTCATGTACCACCAACCTCC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TGTGAACCAGCCCTCAGTGAAACATTTATGTGAAAGGCCATGGTGTTCCCATAAGAGGGTGCATGTTCTCTCCC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TTGACTAACTCTTCAGTATGCCTCATTCTCACGCGCTGGTGTGCAGGAAGGAGTCCAACATGCCCCATTGACAG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TCATGCCCTGTATGTGGAAAGTCTTCAGGTAGAGCACTGGGCTCAGGTTTGAAGATGTGAGTTCTAATCCTAGC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AAGGCCATTACCTCCCAGTGACCTCATGTCTCGATTTCCTCAACCACAAAACAAAGGCATTGGTGAGCTGACCT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CTAAGGCCTCTCCAGTTCTCACCTTCTGTGTCTCTACAGACTGGAGACTAGAAGATTATGGGCACTTTTATTGA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GTCTTCATTTTGTTTCCATTTCTTTGTAGTCATCAGCTGGAGTTGAGGACAAGTTTTAACAATAGATAGGTTTC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TTTTTGTCTCTTTTTAAAAAATTTTATTTAAAATAAATGCCAAGTGTAGTGGCTCATACCTGTAATCCCAGCAC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TTTGGGGAGGCCAAGGTGGGAGGATTGCTTTTGAGTTTGAGACCAGCCTGGGCAACGTGGTGAGACCCTGTTTG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TACAAAAAATTTTAAATTAGCCAGGCATGGTGGCGTGTGCCTATAGTCCTAGCTACTCTGGAGGTAGAGGCAGG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  AGGATCCCTTGAACCTGGGAGGTTGAGGCCACAGTGAGCTGTGATTGTGCTATTGAACTCTAGCCTGGGCAACA  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GAGCAAGACCCTGTCTCTTAAAAAAGACTATTTTTTAAGAACACTTTTAGGTTCACAGCGAAATTTGGAGGAAA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CTTGGCATATGTCATATGCCCCCTGCTCCCATGCATGCACAGCCTCTACCATTAGCAATGTCCCCACTCAAATG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  GTACCTTTGTTGTAATCAACAACCCTGTACTGACACATCATCATCACCCAAACTCCATAGTTCACATTAGGTTT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CACTCTTGGTGTGGTGTACATTCCATGGGCTTGAACAACTGTATAATGACATTATCCACCACTGCAGGATCATA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CAGAGTAGTCTCACTGCCCTAAAACTACTCTGTGCTCCACCTGTTTGTCCCTTCTTTCACTCTAAACTCCTGGC  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AACAACTGACCTTTTTACTGCCTCGATAGCTTTGCCTTCTTCGGAATGTCATGTAGTTGAAATCATACATCATG  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  AAGCCTTTTCAGATTGGCTTCATATAGGTTTCCTTCCTTCCTTCCTCCCACCACCTTCCTTTCTTTCTGTATTC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CTAACTCTTGGATGTATTTTCCCCAGCATCATGACTTGATGGGACTTTTGCTAAGATAGGCAATCATAGAAAGT  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  CATAAATCTCTTGTCAGCCTTATTGGCTCACCTCCGAGATGGTTCCAACACTCTTTAAGGCCCACTTTTCCAAT  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  CCACAGATTCCCCAGCAGAAGTCCAAGCTGCTGAGCCTCACATCATCTTTTGCACTAGTAATCTTTACCACTAC  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TTCACTGTAGCATTTGAAAATTTTCATATGAAGCCATAGTTCTGTGTCTTTTTTTTTTTTTTTTTTTTTTTGGA  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  GACGGAGTCTTAACCTGTTGCCCAGGCTGGAGTGCAGTGGCACAGTCTTAGCTCACTGCAAGCTCCGCCTCACG  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  GGTTCAAGTGATTCTTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCGCCACCATGCCCAGCTAAATTTG  3404

Query    1  ------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCC  56
                              ||||||||||.||||||.||.|||||||||||..|||||||.|||||||||||||.
Sbjct 3405  TTGGCATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTTACCTCAGGTGATCT  3478

Query   57  GCCCACCTCAGCCTCC----------------------------------------------------------  72
            |||..|||||||||||                                                          
Sbjct 3479  GCCTGCCTCAGCCTCCCAAAGTGCTGGGATTAAAGGTGTGAGCCACCGCACCTGGCCTGAAGCCATAGTTCTTA  3552

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3553  ACCTCAGTTGTGCAATAGAATTATCTGGGGAATTTAAAAATTAGAAAAAACCCATGCCCTGAAGATTGTGATCT  3626

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3627  AACTGGTCTTGCGTAGCGCCTGGGCATTGGTATTTTTTAAATGTTTCCCAACTGATACTAATGTGGCCATTCTG  3700

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3701  CAAGCCACAGTTGAAAGGCTTATTCAAGCATCCTGTTGCTGAATGCATGTCGTCCTTACCACATGACTCTGGAG  3774

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3775  GTTTTCTTGTATTCTGATGTGGCTGCCCTGTTGAGGCCTGCCCCTTAGAGTGGAGATTATCCCCTGCAGTAGGC  3848

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3849  TGCCTGGAATATGATCCCCAGTGATCCCTGCTTCCTGGTATTCAGGCCCTGGTGTGATCCCTTTCCCTTGAAGC  3922

Query   73  --------------------------------------------------------------------  72
                                                                                
Sbjct 3923  CTGGGCTGGATTAGTGACTTGCTTCTAACCAACAGCATATGGCAAAAATAAATGTTTATTGTTTTAAA  3990

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