Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- XR_001743948.1
- Aligned Length:
- 3833
- Identities:
- 63
- Gaps:
- 3761
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCCTAATATGCTTTTAATTTTTTTTTAAATGTCTCCAGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTCAGCGGGTGTCAACTGCATACGAGCTTCCCAAAGACTCAAAACTCAGTTTAAAAAAAAAATCAACTCCTTAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAAAGACGTGGCAACTGCGGGTGAAGTATCTCTGGGCAGGAAATCAATGCAGAAATGCAACTGGGGAGAGGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTTGGGGGCCAGTTCCAGGGAGATTGGAACTGCTGTGTTCTCATCAGCAGAAGTGGCCCCTGCCCACCCCCAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTAATCCCTTCTCATGTGGGAGAAGGTCTGTGAGCCCTCTCCCTACCAGGCAGGTTCTATGGCAATGTGGGCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CATACCCTGGGGCAGGGGCCGAGGGACTTAACTCACTTCATGAGCGCCAATGGAGGAGCGAAGGGAATGCCTGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGAAAACAACATTCTACCAGTATGCACTGTTTTCTAACCTACAGAGTGCCTCTGTGTTCACTGTCCCATTTGAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AATTCTAAGTAGAATTCTGAACAGGCTGGAGCAGATTGCCCACCCCAAGGGACAGATGTTGGCTGGTACTGTTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTATTCATGGAAGATTCCTTCTGACACTCCCTCCTTCTTTGTAATTGCCATGAACTGGAGCACTGGGCCAATAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAATCATCCAAGGGTGAACACGCTGCACATGGACGGCTCCTCTTTGTTTTTGAAGGGATTCCATCTCTATTTTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCATGTGCTCCTTCACCCCACTCCCCACCCCCGTCTTTCATTTCTTTCTCTGGAAAAGATACTTCAACTCACAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GACTGCGATGTTGAAACGGACACCCAAGAGCATCACAGATGGGCCAGGCCTGGACCTCTCGGGACAACATTCCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CACGACTTTTAGATAGAAGAGATTAGAGATTTGGGACTGGTGGCAACTGGTAACGTTTTCAGTGTTTGGTAAAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGCCAGGGTCCGGAGCTCTGGGAACAGCCTGATTTAGCTCTTTGTTTAAGTTTTGTGTTAGAGGCTCCCAAGAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCTGATGCAGGGGAAAGAAATTAACAACCATGGCTCATTCACAGCCAGGCAGCCAAATGGACAGCTCTATAAGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTCAAGCCGACAGCGGAGAGAGTGCAACCAAACAGCCTTGGCCCAGCTTTCAGAGGAGAACGTTATTCACCCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACTGCTCTGCATCTGCCTGGATGTCTGCCAAGATCTGTGAGCATTACAGCGTTGGTATGCTTTGGGTGAGGCCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTGGCTATGGCAACAAGTTGGGAGCAACCCGGTCCCTGGGAATGAGAACAGTGTCTAAAATCAGGCAGGCGAGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGCAGGGAGGAGAGGTAAAGGTTGGACTTGCCTGAAGATGGAGCCGTTTTATTGTTGTGGGTAAAGCTGCTACC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATTAGGGGCTGTTTACAGAGTGGGTGCAGCTCAAGCTGGGAGCATGTTAGACTCAGCGACTACGATCAACCTAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGACTTGTTCCCATGAGACAGAGTAAATTAACTGTTGCAGTACTGGTCATGTACCACCAACCTCCTGTGAACCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GCCCTCAGTGAAACATTTATGTGAAAGGCCATGGTGTTCCCATAAGAGGGTGCATGTTCTCTCCCTTGACTAAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCTTCAGTATGCCTCATTCTCACGCGCTGGTGTGCAGGAAGGAGTCCAACATGCCCCATTGACAGTCATGCCCT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTATGTGGAAAGTCTTCAGGTAGAGCACTGGGCTCAGGTTTGAAGATGTGAGTTCTAATCCTAGCAAGGCCATT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACCTCCCAGTGACCTCATGTCTCGATTTCCTCAACCACAAAACAAAGGCATTGGTGAGCTGACCTCTAAGGCCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTCCAGTTCTCACCTTCTGTGTCTCTACAGACTGGAGACTAGAAGATTATGGGCACTTTTATTGAGTCTTCATT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTGTTTCCATTTCTTTGTAGTCATCAGCTGGAGTTGAGGACAAGTTTTAACAATAGATAGGTTTCTTTTTGTCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTTTTTAAAAAATTTTATTTAAAATAAATGCCAAGTGTAGTGGCTCATACCTGTAATCCCAGCACTTTGGGGAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCCAAGGTGGGAGGATTGCTTTTGAGTTTGAGACCAGCCTGGGCAACGTGGTGAGACCCTGTTTGTACAAAAAA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTTTAAATTAGCCAGGCATGGTGGCGTGTGCCTATAGTCCTAGCTACTCTGGAGGTAGAGGCAGGAGGATCCCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGAACCTGGGAGGTTGAGGCCACAGTGAGCTGTGATTGTGCTATTGAACTCTAGCCTGGGCAACAGAGCAAGAC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCTGTCTCTTAAAAAAGACTATTTTTTAAGAACACTTTTAGGTTCACAGCGAAATTTGGAGGAAACTTGGCATA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGTCATATGCCCCCTGCTCCCATGCATGCACAGCCTCTACCATTAGCAATGTCCCCACTCAAATGGTACCTTTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTGTAATCAACAACCCTGTACTGACACATCATCATCACCCAAACTCCATAGTTCACATTAGGTTTCACTCTTGG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGTGGTGTACATTCCATGGGCTTGAACAACTGTATAATGACATTATCCACCACTGCAGGATCATACAGAGTAGT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CTCACTGCCCTAAAACTACTCTGTGCTCCACCTGTTTGTCCCTTCTTTCACTCTAAACTCCTGGCAACAACTGA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CCTTTTTACTGCCTCGATAGCTTTGCCTTCTTCGGAATGTCATGTAGTTGAAATCATACATCATGAAGCCTTTT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CAGATTGGCTTCATATAGGTTTCCTTCCTTCCTTCCTCCCACCACCTTCCTTTCTTTCTGTATTCCTAACTCTT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GGATGTATTTTCCCCAGCATCATGACTTGATGGGACTTTTGCTAAGATAGGCAATCATAGAAAGTCATAAATCT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CTTGTCAGCCTTATTGGCTCACCTCCGAGATGGTTCCAACACTCTTTAAGGCCCACTTTTCCAATCCACAGATT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CCCCAGCAGAAGTCCAAGCTGCTGAGCCTCACATCATCTTTTGCACTAGTAATCTTTACCACTACTTCACTGTA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GCATTTGAAAATTTTCATATGAAGCCATAGTTCTGTGTCTTTTTTTTTTTTTTTTTTTTTTTGGAGACGGAGTC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TTAACCTGTTGCCCAGGCTGGAGTGCAGTGGCACAGTCTTAGCTCACTGCAAGCTCCGCCTCACGGGTTCAAGT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GATTCTTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCGCCACCATGCCCAGCTAAATTTGTTGGCATTT 3256
Query 1 ---------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTC 65
||||||||||.||||||.||.|||||||||||..|||||||.|||||||||||||.|||..||||
Sbjct 3257 TTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTTACCTCAGGTGATCTGCCTGCCTC 3330
Query 66 AGCCTCC------------------------------------------------------------------- 72
|||||||
Sbjct 3331 AGCCTCCCAAAGTGCTGGGATTAAAGGTGTGAGCCACCGCACCTGGCCTGAAGCCATAGTTCTTAACCTCAGTT 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 GTGCAATAGAATTATCTGGGGAATTTAAAAATTAGAAAAAACCCATGCCCTGAAGATTGTGATCTAACTGGTCT 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 TGCGTAGCGCCTGGGCATTGGTATTTTTTAAATGTTTCCCAACTGATACTAATGTGGCCATTCTGCAAGCCACA 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 GTTGAAAGGCTTATTCAAGCATCCTGTTGCTGAATGCATGTCGTCCTTACCACATGACTCTGGAGGTTTTCTTG 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 TATTCTGATGTGGCTGCCCTGTTGAGGCCTGCCCCTTAGAGTGGAGATTATCCCCTGCAGTAGGCTGCCTGGAA 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 TATGATCCCCAGTGATCCCTGCTTCCTGGTATTCAGGCCCTGGTGTGATCCCTTTCCCTTGAAGCCTGGGCTGG 3774
Query 73 ----------------------------------------------------------- 72
Sbjct 3775 ATTAGTGACTTGCTTCTAACCAACAGCATATGGCAAAAATAAATGTTTATTGTTTTAAA 3833
