Nucleotide Global Alignment

Description

Query:
TRCN0000492083
Subject:
XR_001743948.1
Aligned Length:
3833
Identities:
63
Gaps:
3761

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCCTAATATGCTTTTAATTTTTTTTTAAATGTCTCCAGAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTCAGCGGGTGTCAACTGCATACGAGCTTCCCAAAGACTCAAAACTCAGTTTAAAAAAAAAATCAACTCCTTAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCAAAGACGTGGCAACTGCGGGTGAAGTATCTCTGGGCAGGAAATCAATGCAGAAATGCAACTGGGGAGAGGGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCTTGGGGGCCAGTTCCAGGGAGATTGGAACTGCTGTGTTCTCATCAGCAGAAGTGGCCCCTGCCCACCCCCAT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCTAATCCCTTCTCATGTGGGAGAAGGTCTGTGAGCCCTCTCCCTACCAGGCAGGTTCTATGGCAATGTGGGCA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CATACCCTGGGGCAGGGGCCGAGGGACTTAACTCACTTCATGAGCGCCAATGGAGGAGCGAAGGGAATGCCTGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGAAAACAACATTCTACCAGTATGCACTGTTTTCTAACCTACAGAGTGCCTCTGTGTTCACTGTCCCATTTGAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AATTCTAAGTAGAATTCTGAACAGGCTGGAGCAGATTGCCCACCCCAAGGGACAGATGTTGGCTGGTACTGTTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GTATTCATGGAAGATTCCTTCTGACACTCCCTCCTTCTTTGTAATTGCCATGAACTGGAGCACTGGGCCAATAT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AAATCATCCAAGGGTGAACACGCTGCACATGGACGGCTCCTCTTTGTTTTTGAAGGGATTCCATCTCTATTTTG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCATGTGCTCCTTCACCCCACTCCCCACCCCCGTCTTTCATTTCTTTCTCTGGAAAAGATACTTCAACTCACAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GACTGCGATGTTGAAACGGACACCCAAGAGCATCACAGATGGGCCAGGCCTGGACCTCTCGGGACAACATTCCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CACGACTTTTAGATAGAAGAGATTAGAGATTTGGGACTGGTGGCAACTGGTAACGTTTTCAGTGTTTGGTAAAC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGCCAGGGTCCGGAGCTCTGGGAACAGCCTGATTTAGCTCTTTGTTTAAGTTTTGTGTTAGAGGCTCCCAAGAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GCTGATGCAGGGGAAAGAAATTAACAACCATGGCTCATTCACAGCCAGGCAGCCAAATGGACAGCTCTATAAGA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CTCAAGCCGACAGCGGAGAGAGTGCAACCAAACAGCCTTGGCCCAGCTTTCAGAGGAGAACGTTATTCACCCCA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ACTGCTCTGCATCTGCCTGGATGTCTGCCAAGATCTGTGAGCATTACAGCGTTGGTATGCTTTGGGTGAGGCCT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GTGGCTATGGCAACAAGTTGGGAGCAACCCGGTCCCTGGGAATGAGAACAGTGTCTAAAATCAGGCAGGCGAGG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GGCAGGGAGGAGAGGTAAAGGTTGGACTTGCCTGAAGATGGAGCCGTTTTATTGTTGTGGGTAAAGCTGCTACC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ATTAGGGGCTGTTTACAGAGTGGGTGCAGCTCAAGCTGGGAGCATGTTAGACTCAGCGACTACGATCAACCTAT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TGACTTGTTCCCATGAGACAGAGTAAATTAACTGTTGCAGTACTGGTCATGTACCACCAACCTCCTGTGAACCA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GCCCTCAGTGAAACATTTATGTGAAAGGCCATGGTGTTCCCATAAGAGGGTGCATGTTCTCTCCCTTGACTAAC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TCTTCAGTATGCCTCATTCTCACGCGCTGGTGTGCAGGAAGGAGTCCAACATGCCCCATTGACAGTCATGCCCT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GTATGTGGAAAGTCTTCAGGTAGAGCACTGGGCTCAGGTTTGAAGATGTGAGTTCTAATCCTAGCAAGGCCATT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  ACCTCCCAGTGACCTCATGTCTCGATTTCCTCAACCACAAAACAAAGGCATTGGTGAGCTGACCTCTAAGGCCT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CTCCAGTTCTCACCTTCTGTGTCTCTACAGACTGGAGACTAGAAGATTATGGGCACTTTTATTGAGTCTTCATT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TTGTTTCCATTTCTTTGTAGTCATCAGCTGGAGTTGAGGACAAGTTTTAACAATAGATAGGTTTCTTTTTGTCT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CTTTTTAAAAAATTTTATTTAAAATAAATGCCAAGTGTAGTGGCTCATACCTGTAATCCCAGCACTTTGGGGAG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GCCAAGGTGGGAGGATTGCTTTTGAGTTTGAGACCAGCCTGGGCAACGTGGTGAGACCCTGTTTGTACAAAAAA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TTTTAAATTAGCCAGGCATGGTGGCGTGTGCCTATAGTCCTAGCTACTCTGGAGGTAGAGGCAGGAGGATCCCT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TGAACCTGGGAGGTTGAGGCCACAGTGAGCTGTGATTGTGCTATTGAACTCTAGCCTGGGCAACAGAGCAAGAC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CCTGTCTCTTAAAAAAGACTATTTTTTAAGAACACTTTTAGGTTCACAGCGAAATTTGGAGGAAACTTGGCATA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TGTCATATGCCCCCTGCTCCCATGCATGCACAGCCTCTACCATTAGCAATGTCCCCACTCAAATGGTACCTTTG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  TTGTAATCAACAACCCTGTACTGACACATCATCATCACCCAAACTCCATAGTTCACATTAGGTTTCACTCTTGG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TGTGGTGTACATTCCATGGGCTTGAACAACTGTATAATGACATTATCCACCACTGCAGGATCATACAGAGTAGT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CTCACTGCCCTAAAACTACTCTGTGCTCCACCTGTTTGTCCCTTCTTTCACTCTAAACTCCTGGCAACAACTGA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CCTTTTTACTGCCTCGATAGCTTTGCCTTCTTCGGAATGTCATGTAGTTGAAATCATACATCATGAAGCCTTTT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CAGATTGGCTTCATATAGGTTTCCTTCCTTCCTTCCTCCCACCACCTTCCTTTCTTTCTGTATTCCTAACTCTT  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  GGATGTATTTTCCCCAGCATCATGACTTGATGGGACTTTTGCTAAGATAGGCAATCATAGAAAGTCATAAATCT  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  CTTGTCAGCCTTATTGGCTCACCTCCGAGATGGTTCCAACACTCTTTAAGGCCCACTTTTCCAATCCACAGATT  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CCCCAGCAGAAGTCCAAGCTGCTGAGCCTCACATCATCTTTTGCACTAGTAATCTTTACCACTACTTCACTGTA  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  GCATTTGAAAATTTTCATATGAAGCCATAGTTCTGTGTCTTTTTTTTTTTTTTTTTTTTTTTGGAGACGGAGTC  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  TTAACCTGTTGCCCAGGCTGGAGTGCAGTGGCACAGTCTTAGCTCACTGCAAGCTCCGCCTCACGGGTTCAAGT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  GATTCTTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCGCCACCATGCCCAGCTAAATTTGTTGGCATTT  3256

Query    1  ---------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTC  65
                     ||||||||||.||||||.||.|||||||||||..|||||||.|||||||||||||.|||..||||
Sbjct 3257  TTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTTACCTCAGGTGATCTGCCTGCCTC  3330

Query   66  AGCCTCC-------------------------------------------------------------------  72
            |||||||                                                                   
Sbjct 3331  AGCCTCCCAAAGTGCTGGGATTAAAGGTGTGAGCCACCGCACCTGGCCTGAAGCCATAGTTCTTAACCTCAGTT  3404

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3405  GTGCAATAGAATTATCTGGGGAATTTAAAAATTAGAAAAAACCCATGCCCTGAAGATTGTGATCTAACTGGTCT  3478

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3479  TGCGTAGCGCCTGGGCATTGGTATTTTTTAAATGTTTCCCAACTGATACTAATGTGGCCATTCTGCAAGCCACA  3552

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3553  GTTGAAAGGCTTATTCAAGCATCCTGTTGCTGAATGCATGTCGTCCTTACCACATGACTCTGGAGGTTTTCTTG  3626

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3627  TATTCTGATGTGGCTGCCCTGTTGAGGCCTGCCCCTTAGAGTGGAGATTATCCCCTGCAGTAGGCTGCCTGGAA  3700

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3701  TATGATCCCCAGTGATCCCTGCTTCCTGGTATTCAGGCCCTGGTGTGATCCCTTTCCCTTGAAGCCTGGGCTGG  3774

Query   73  -----------------------------------------------------------  72
                                                                       
Sbjct 3775  ATTAGTGACTTGCTTCTAACCAACAGCATATGGCAAAAATAAATGTTTATTGTTTTAAA  3833

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