Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- XR_001747389.2
- Aligned Length:
- 6428
- Identities:
- 64
- Gaps:
- 6356
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TACCAAAGTACAACTTCCAATTTTTATTTCAGAAGGAAACCATCCTTGAGAGATGAGAAAATAACTTACTTTAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTTTATTCATTTTTGTATTTGGCTGCCATAAAATATCTTTTACTAAGTAGCTTTAGGGTTTTTTTTTTAATCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AATCCTGATTAAATTAAAAGAAAAACCTGGTAAGTTAATTGTAAGCTTTCCCATAAAAGAGAGAAGCACAAAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCATGGAATATATCCAAGAAACATAACATAAACATGAGACTTACAATGCACAATTTAAAATTTCATATGTTGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAAATGATAAATGTCTGTTCCAGCTATGAATACTTTAACTTCAAAAATCTTTCATAGCCTTAAAAAAGAACTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CACAGAAACAGAAGCTGGAATGTTATTTGTGAACTAGGCCTTGCACCTTGTCAATATTTTTAGTTCTTAAATTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGGAATGTTCTAAAGACATAAAACATCTACTTCATTTTGAAATTTTGATTTTAACATTTCACTAACAACACTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGAAAGGATCATCTTAACTAAAGGTGTCAAGACTAACGTTTGAGCTTAGCCGTTGAACTTTCTCTTAGGGGAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGTTTAATCCCCAAGTACTATGAGATAGGCGTTTTAAGGCAACTTTTTAAAAAGGAAAATAAATCTGCTTTTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCCGTCTAGGAAAGATACATTTTTCCTTGTGGAAATCTGCAGTCTGAAAAGACAGATATGAAAAGCATGAACTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTGAAAATAACCTAAATGTTCTTTGAAAATTTAAAGGCCAGCTTATCCTGCAATGGTGATAGAATAGTCGGCTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACAACACGCAAAGCCGAGCCGCGGGTGGGCAGGCGCCGCCCGTGGCTCGCGGAGTGGATGCACTCGAGGGCGCG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCCGCTGCGCTTGGGGAACTTTCAGGGCGCCAAGTACGGGTAGCGCTTCTGATGGATTCCCGGGTCTGGGAGGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCCGATTATCCCGGGGCCGGGTGACACGCACAAAGCTGAGGTTAGAGTTGGCCAGGAAGGGAGGACCTGGTGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCGGTGGAACAAAAGCGGGAAGGCCTTTCCTTCTAGGAGCAAAACCAGCGACGCGTCCCGGACGCCCGGGGACC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTGTGGGTCTCGGTTTCCTTCGCTGTGACCCTGACATGTTTCCCTCCACCGGCCCGAGGAAACCGTCGCTTCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGCCTCCAGGTACCGTCACCTCTGCGGGGCTGCGAGCGGAGGACCGGGACAGAGAAGGAGCCGGCGGTCCTGGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAGCCGCGCGGCTCAAAACCCGACGGCGCGGGGACTCCGGGCCTGGGGCCTCCATGGCTGTGGCCTCCTTATCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCCGGGCCGGCTGCTCCCTACGCTGCGGGGCTGAGGGCACTGGGGACCCAGGGGCTTCTCTGGCACTAGCGAGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACCTAACCTTGAGTGAAGAACGATGTCAAGTGAAAGTGAAGAATAACGGGGGTGGGCGCGAAGAGAATGGTCTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGGGCGCGCTTGCGCCTCTACCCGAGGACCGAGGTGGGGATTCGACAGACGCCAGCGGTGGGGATCCGGGGCGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAAGCCCCGACTTTCTGAGTCGTGAGCCGCCTCCAGTCGCCCCAGGACGTAACCCCGAGGAGCTTTCAGACACT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGCCGCGCCTAATATCGCTGAGAACCGCGAAAACCGGAGTTCCGGCCGCCTCCCGGACTGGCGTCCCGAGGCCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGGGACCCGCTTGGGGCTCCCGGCCGAGCCCCGACCTCGGACGTTTTTCCGGGAGCCGCGAGAGGCCTGGGGGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTGGGCCAGGCGCCGCGGCGGGCATCGATCGCCGGCTCCCAGAGAGTGGCCCCGCGCAGGTGGAGGTGACCCCG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCACCTCCAGGAGCGCCCCCAAGCCCCGGTACCCGCAGCGTGCGCCCTCTCCTCCTCCCCGAAGGTGTTATCTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGGAGCCAAGCATCTCCTTTGGTCCTGCGCTCCTTCGCCTAGCGCCTGGTGCCCCCCACCCGGCTGCATCCGAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCTTGCGCGGCCCGGTCCCATCAGCCGAGCGTCGCCCGCCCAGGAGGAGGCTCGGGTTCTCCGCAGAAGCGAAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ACTTTCTCTTTTTGTTTTAAGTTAGAACCTTGCTTTTGCAGTGATTCGTTGCTGTGGCGTGATTTTAAACAGGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GAGAAATCGGAGTCTCATTTTCCCAGGGGGGCTTCCAATGAGGATTTTAAGAGAAGCGTGCAAAGAAGACAGCA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ATGTCCATCTTTTTTTTTTCTTGTTTTCTTTTGAACAGAGGGAACCCCCACGCGCTGAGATAGTTATGTTTTTA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGGCTAAACTTTTTTAAAATTAGTTTTTCTTTTACACTTATGGCTGACTTTTGATCCTTTTAAAGAAAGGATGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGTCAAAACAGATTAATGCTTTTGAATACACAACGTCCCCACGTCCCCAAATTGTGGTGCTGGGATAGTTCCTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TAAGATGCATTCTGATTTTGAAGTTCAAGGTCTCTAAGCGCTGTTAAGCGGAACCATGAAAAATACGTTGCTAC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ATTAAAGATAAAACAGACGGTGATACTGACTGCAGAATCGTAGTAGAAACTTTTTTTTTTTTTTTGAGGCTGTG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CAGGATTTGCCTTGGTTTTATTAGGGAACCTGCTAATAGAAGCAATTTCAAGTGACGGGCTTCCCTCAGTAAAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGCTGGAAGCAATGACATCTTTTCTATCTGAGTGACTCTCCTTAGTCGTGGTAAATAAATAAATAAATAAATAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ATAGATAGATAGATAGATAAATAAATAAATAAATAAAAATTAGTTTACATGCAGTGTTTGAAAAGAAAATGATT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TTGCTTCCCAAGTTTTTATGTGTTTTCTTTTTTACCAACTATATTTCACTTTATTTACAATTGTCAGTTTATTC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TCACACCTTCTGGTTAGTTTTATCTTCTCACCATGGTCTGTTAGAACCCCATCCTCGAGCAAAAAAACAAAAAC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AAAAACCACCCCCCCAAAACAAACAAACAAACAAACAAAACAGGTGTTCATCCCTGTGAGATGCTAATGCCCCT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GGAACTGTTTGAAAAGAGCAAAATTTTGTAAGGAGATTCTTTTCAAAAAGTGTTAGAGAAGTATTCTTCAAAAA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CATCTTAGAATGTTTCCTTAAAAAATTTCCTTTCTTGGTTTTCATTAATTGCCTTTGATTAAAATTAGGTTACA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AACATATCTTAATTTCAGACTGTTTCTTTATAAAAGAAAGGAGAAAGTAAATAGGTGTTGGCAAGGACTAAACC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AATGCAACTAGGCCCTGTTGAGAGCCTAAATCTGTAAACTGGTACCCTTAAAAAACATCAATCAACTTGAGGTT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CGTACAGGTAGTTCTTTGACTCAAACAGTTGATTTTTAAAAGTCTTATAAAATAGGTTAAAATGTGTTTTTAGT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CCAGGTTCCTACTTCTTTGTTATGCATTTCTCCTCGTAGATAAATAAATGAATCTAACTTGATGAGTAGGTAGA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TTTTTCTCCAGAAGAACTTTCTAAAAATGGGCAAAGTTAGGGAAGTGATTAATACCCTTCAGTTTAATTGGAAT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TATTCAGTGCTTATACCAAGTTAATCCTATTAAGATGCTATTTCCTGCTCAGGGGGATAAATTAAGCACAACTT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 AGATTATTTTAGGTGGACAACTGGTATATAGTCTAAGCAATGGGGGCTGGAAAAAAGTATCTCTTCTCCAAAAA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 ATATAGATTATGTACCAGTAATGTTCAAAGTACTTTGAGGAAGTGTATTGATGGGATGAATATAAATCATAGTG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 ACTGTTGTTAAGGGGTTTACGGATTATAAAGAGCAATTGAGCTTCCTTTATTTTCTCTTATTTAGAAAACAAAC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 ATTCATAAGAAAAAAATAAAATTAGATCCCTTCTTTTGCCCACATACAAATTCAGTTTCAGATCAATTAAAAAG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TTAAATAAGAAAAATAGAATTAAAAAAATATTGGAAGGCTGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACT 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TTGGGAGGCCAAGGCGGGCAGATCACGAGGTCAGGAGATTGAGACCATCTTGGCCAACATGGGGAAACCCTATC 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 TCTAGTAAAAATACAAAAATTAGCTGGTTGTGGTGGCACATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGC 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 AGGAGAATCGCTTGAACCTGGGAGGCAGCGATTGCAGTGAGCCGAGATCGCGCCACTGCACTCTAGCCTGGCAG 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 CAGAGTTATCTCTGTAACTCTCCATCTCAAAAAAAAACAAAAAAAATTGAAAGGAAATATAGAATTTGTAGTAT 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 GAAAGGATTTCTTAAACAAAACATTAAAATACACAATCCATTAAGGAAATGATCAATTGGATGACAGTCATGCT 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 CCAAATAATGATATGTTAGTCAATACATGATAATAGTCCCATAAGGTTATAATATTGTATATTTACTGTACCTT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 TTCTATGTGTAGATGTGTCTAATTATACAAATACCATTGTGTTACAATTGCCTACAGTATTCAATACAGTCACA 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 TGCTGTACAGGTTTGCAGCCTAGGAGCAATAGGCTTGTACCATATACAAACCATCTAGGTTTGTGTAATTACAC 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 TCTATGATGTTAGCATGACAAAACTGCCTATGGACCTATTTCTCAGAATATGTCCCTGTAGTTGAGTGCCATGT 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 GACTGTATATAAAAATTTTTAAAAATACTTTTTACATGACAAAAGATATCATAAAATGTTACAAGATAAACTGA 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 GAAGATATTTTCAAGGCATGTACTTGGTGAAGGATTCATATTCAAAATGTATAAATAACTTATATAGAAAGAAT 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 TTACTAATTTATGTATAATGAATTTCATAAATAAAAGATGTGGGCCAGGATATATACATATGAAGTGAAAGTAT 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 AGTACTATCAATAGGATGAATACATATCAACTTCAAAAAATGTAATTTCCTTTGGGATAGAAAGAAAGAAGGAA 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 GGAGGGGGAATAGGAAGAGGGCAACAACTTCCTGCCCAGGGGGCAACAACTCTTTTTTTTTTTTTTTTTGAGAC 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 AGAGTCTTGCTTTTGTCCCCCAGGCTTGAGTACAATGACTCGATCTCGGCTCACTGCAACCTCCGCCTCTCGGG 5106
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5107 TTCAAATGATTCTCCTGCCTCTGCCTCCCAAGTAGCCAGTTAAGGCACCTGCCACCATGCCCGTCTAATTTTTG 5180
Query 1 ---------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCC 59
|.||.|||||.||||.|.||.|||||||||||.||||||||||||||||.|||||||||
Sbjct 5181 TGTTTTTTAGTAGAGACGGAGTTTCACCATTTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGTTGATCCGCC 5254
Query 60 CACCTCAGCCTCC------------------------------------------------------------- 72
|||||||||||||
Sbjct 5255 CACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCGCCCAGCCCACAGCAATTCTTTATAAAA 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 AGATCAGAGGCAACTATGGGAAGACATTAACACTTTTTGTTCTTTGTAGATTGTTAAAAGCTTGTTATAATTTA 5402
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5403 TTTAAAAATCTCTAACATCAATTCCTAGTCTAAAGAATGAACAAATGACACATTTCTTTTCCTTAGTCAATAAT 5476
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5477 AATCTTGTAAGATGGTGTTCACGTGCTTTTCTTTGAGGGCAAAGAAAACACCATTCCCCAGTGTTTTTCCTGGG 5550
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5551 CAGTGTTTGAATATTATATGATACTCACAGCAGAGATTTTCCTAGTTTGGCTTCTGTTGTAAGCTTGTTTTCTG 5624
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5625 AGTAGATTTAAATGAGAAGAACAGAAACATATTTGAAACTATGACTATGTATAAGAGCATTTATTCTCCTATAA 5698
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5699 TGAAATCGTGGAAAATGTTTTTAAAAAGTGAGCAAACAAAAACCTCCACACCATTATAGAAACACGGTTAAAAA 5772
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5773 ACTATTGAATAATCTCAAGCCTAGTGTGTAATAATTATTAAGTGTGTCTAATTTGTTGTGCTAAGTGTCAGGAA 5846
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5847 TTGGTATTGTGGAAGGATATGTGAGATCTCATTTTCTCCTTTTATATGGCAGGAGTTTATACAGTATTTACATC 5920
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5921 TGTCATTGATACTTTTTATGAACAGAAGTTTTGTTTACTTATAACTTCCACAGGGATTATTCATATGGAGCACT 5994
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5995 GGAAAGATGTAACATTTCATTTGCTTTGATACCTTGTGTTTATTTTAGGTCGAAAAGCATCATGAAGCCAAGTG 6068
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6069 GTTATTGTTTTGCTTATTCAGTGTGAACTGAGTGAGCCAGGTTTGTATACCAAGTGATTCTCGTGGTGGACAAT 6142
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6143 ACCAATATGATTATGCCAAATGCATTGCTTCTGAGGCATCACTCTTTGGGCACATATAGACCCTGCTGATTTCT 6216
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6217 GCCAAAGCACTCTTCTTAAAGTTCCAAAACATTACCCCAAAACCTCTATAGCCCCCTATTGCCAACAAAATTAA 6290
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6291 AGCCTTTCTCTTCATTGGCATTAGAAGCCCCTGTAACCCATTGCTTTTCCATTTCCAGCCTCTTTCCAAAATTA 6364
Query 73 ---------------------------------------------------------------- 72
Sbjct 6365 CCAAACAAACTCTGTATCCTGCAGCCACCAAACTGTACTAGTTGTAATATATTCACTAAGAACA 6428
