Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- XR_001747991.1
- Aligned Length:
- 6852
- Identities:
- 64
- Gaps:
- 6780
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CACACGTACACACACACACACACACACACACACACACACACTACATATTTTTGATGTTATCTCAAATGTCTCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AACCTTTGTTCATTTTTCTCCATTCTTTTTTCCTTTCTATCCCTTAGACTGTATAATATCAATTTACATATCTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TAATTCACAGATTCTTTCTTCTGCCTGCTCAGATCTGCTGTTGAGCCCTTCTAGTAAATTTTTCATTTCAGCTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCATACTACTCAACTCCAGAATTTATATTTGGTTCTTGAAAAAAATATATAATTTCTATCTCCTTGTTGATATT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CATTACCTGATAAGATATTATTCTCATACCTTTTTCTAGTTCTTTGGATATGGTTTTCTTTACTTCTTTGAATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TATATAGAATAGCTGATTTAAAGTTTTCATCTTATAAGTTCAATATATGGGCTTCAGGGACAGTTTTTATCAAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TATTTTTTCCCCCGGTGTATGTGCCTTACTTTCTTGTTTCTTTGTGTGCCTCATAATTTCTTATTGAAAACTGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATTTTAAATAACATAATATAATACAGCAACTTTGGAAATAACCTTCTCTCCCTTCCTCAGGGTTTGTTGTTGTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATGTTGCTTCTTTGTGTGTTTAGTGACTTTTCTGAGCTAATTCTGCAAAGTCTGTGTTTTTTGTCATGTGTGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCACTGAAATCTCTCTCTGCTTAGTGTTCAGCTAGTAATTAGACAGAGAGTTTCTTGATGCTTGAGACCAATAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTCACCTTGTTTTTGCAGAGTGGCTCTGTGTGTATGTTGGGACATGCCTTCAACTCTCAGACAGGACATTGACA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACTCCACCTTAGCCTTCCTGCTTGTGCAGAGCCTTAAGCTTAGCCCAGGGTGAGAGCTCAGGACCTTCCTTAGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTTTCCTGCACATGTGCACAGCCCTGGGCATGTGCACCCTCCTGTGCGTACATATGGCTTTCTATATTCCTTGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GATATTTCAGAGCCTTTCAAGGCCCTTTATAGATATTTTATTCCCCCACATTTTCTTTTTAAGCTTTTTGTTTA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCCCTTTTTTTTTTTTTGCCTCAACTGTTATCCATTGTTTTAGGCAGCCACAAAGTCCAACAATTGTCTCTAGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGTTTTCAACAAATACCCTTAAGGAAAAAGCTGTTCACTCCAGGCAAGCTTTGAGACAGGTGAAATAAAGACAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCTTGCAAATGGTATCTTCCAGGGAACCACTAGACAGGTCAAATAATTACAACTCTCTGGGAATGAGGCTTTGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGGAACTCCAAGGCTGTTCTACCCCTTCTTGTAGCTGCCAGGCTGCTGGTTTCCATGATGATTGTGGTTTGTTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTTTTCAAAGCTACTGCAGAGTTGGGGTGAGGGGGATGGAATTGGAGCAAGTTAAAATGCCACAAGGCTCACTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTCTTTCTATAATTATGTCATTTTTTTTCTTGAACGAAGACTTCCCAGATTGCTATAAACTTTTGATTAATTTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGAGTTCTGAAAAAATTGATTCTCACCATTTTTTGCCATTTTTCTCATTGCTTTTAGGGGGGAGGAAATTTTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGAGGATTTTACTCCTACCATTTTCATTGACATTACGTGCAATATATTTTAATTACCCTTCTTTGTGATTGCTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGTCACTTCTCAAAACTCAGTTCAAATGTCTCCTCCATTGCAAAGCCCTCTTCTTTGTATCCTCAGGGCAGCTA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTCCTCTATTCTCCTATACCTCTGGGTTTATGTCTTTGTTATTTCACTTTTCATAATAACAGTTACTTACATCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTTTCTATCCCTTTTTCCAGTCTGTAAGCACCCAGTCTGTGACTTGTTCATCCTCCATGCCCAGGCTAGTTTCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GACACACGGTAGATATTCAGGTTTGTAGTCTGAAGAGTATTGTCCTAGGAGACCTCAGAGCCTAGCCAAGGGCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCTGAGTTCCAGCCACCATTTCTCTCCTTCTTCTATAATTCACAGCTGACCTCTATCTCTTCATTGTCTTATGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GTGCTCTGGTGTGATGAGAGTAAGTTCAGAATTGACACACTGAGTGTATGATATGGTTTGGATCTGTGTCCCAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCCAAATCTCATGTCAAATTATAATCCTCAATGTTAAAAGTGGACTCTGATGGGAGGTGATTTGATCATGGGAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGGATCCTTCATGATCAAGAAACCTTCATGATTCATCATCCACTTGGTGCTATTCTCGTGATAGAGTTCTCATG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGATCTGGTTGTTTAAAAGTGTGTGGCACCTCCCCCTTCTCTCTCTTGCTCTTGCTCCTGCCATGTTAGAGGCC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTGCTCCCCCTTTTTCTTTCACCATGATTGGAAGCTTCCTGAGGCCTCCCCAGAAGCAGAAGTCACTGTGCTTC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CTGTACAGCCTGTGGAACAGTGAGAACTTCTTTTCTCTTGAAATTGTCCAGTCTTAGGTATTTATTTATAGCAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TGCAAGAATTGACTAATACAGTGTATGAGGAAAATAGGGAGCAAAAAGTTAAATCCTGTGTGGGTGACATTCAG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAACAACAACAACAACAACAACAACAATAATAATAGCAGCTACTGTTTGCTGAATACAGTCTGTGCTAGACACC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AGGCTATGGGCTTTATAGGCAATATCTCAATGAATTCTGACATCAACCCTATGAGGCATGTACTATTATCCTCA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTTTACAGGTGAGGCTGAGTAAGGGAAGTGGGAGAACTGAGGTTGGATGAAGGCCTGACTCTAAAGCCTATATT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CTTAACTGTCCCTTCTGAGGGGTTTTTGAGCAGCCAGTTGGAGGAAAGGAAGCCCCACCTGTGTTTGCCTTCCC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CAGGACCTATTCTGCCTCCTTGTCTAAAGAGATGTGCCTGCTCCCAGGTGTGTTTAGCCCCGTGTGGGCTCACT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TGGGTCACCTTGTGCTTTGAAACAAGATAGCACTGAGGGCTCCTGCTGCAACTGGCTCCCAGGGCAGACAGGGG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TAGAGGCCCCACTTCCCTGGCATTGGGGAGACAGATGTGGCCCTCGGGCAAGAGGTGACAAAGATCTTCCATCA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TCACCCCAACAATTCCAACATGGTGACAGCCCCAGACTGCTAGAAAAGCCAACCCACATGGAGGCGAGATAAAA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TCCAGAGGGCTCAGAAACATTTCAACAAATGCTAATATCGGTCTCTCCAATACAGCTCTGTCAGCAGGAAGGGA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GAATTCTGCCAGCATGCATGCATGGGGCACACTTTTTGGCACAAGGGACCTTGTTGCTAAGCAACAGTAGTTGG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CCTCCCCTCCTCCCCATAACCTTTTCCTCTGTTTCTGAGTTTCCAGTTAGCAGATGGGAGGGGCTGGGGTTGCC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TAGCCCAGCCCAGCCCTTGTCCCCCTTTCCTGCAACAAGGGGCCTATTCATGGGTCCTCAGCAGAGTTCATTGT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CTCTGTGGCGCGTGTCTGTGTGAGTGTTGGAGTAGGGATACAGGGAGGGGCCATGTGCGAACCAGGGAGACCTC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 ATCTTCCAACCAAGCTTGCTGGGCTAGCTTTAATCAATGCTGGCCTGAGAACAGGAGCGGAACATTGCCTAGTA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GACCCTGAGGCTTTACAACAGTGCCACTGACCCCTATGAGCCTGATGCTGGATGACCAACCCCCTATGGAGGCC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CAGTATGCAGAGGAGGGCCCAGGACCTGGGATCTTCAGAGCAGAGCCTGGAGACCAGCAGCATCCCAGTAGGCC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 AGACTGGGCCATAGGGGAATGACAGGGTGGGGACAGTGGAGGGCAATCATCCTACATTCCCCGGATCCTCCTTG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GGGTCAGCCCCACATGATTGATGTTTCTCAGGCAGTGTGCTGGCGTTCCATGCGACGTGGCTGTGCAGTGCTGG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GAGCCCTGGGGCTGCTGGCCGGTGCAGGTGTTGGCTCATGGCTCCTAGTGCTGTATCTGTGTCCTGCTGCCTCT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CAGCCCATTTCCGGGACCTTGCAGGATGAGGAGATAACTTTGAGCTGCTCAGAGGCCAGCGCTGAGGAAGCTCT 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 GCTCCCTGCACTTCCCAAAACAGTATCTTTCAGAATAAACAGCGAAGACTTCTTGCTGGAAGCGCAAGTGAGGG 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 ATCAGCCACGCTGGCTCCTGGTCTGCCATGAGGGCTGGAGCCCCGCCCTGGGGCTGCAGATCTGCTGGAGCCTT 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 GGGCATCTCAGACTCACTCACCACAAGGGAGTAAACCTCACTGACATCAAACTCAACAGTTCCCAGGAGTTTGC 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 TCAGCTCTCTCCTAGACTGGGAGGCTTCCTGGAGGAGGCGTGGCAGCCCAGGAACAACTGCACTTCTGGTCAAG 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 TTGTTTCCCTCAGATGCTCTGAGTGTGGAGCGAGGCCCCTGGCTTCCCGGATAGTTGGTGGGCAGTCTGTGGCT 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 CCTGGGCGCTGGCCGTGGCAGGCCAGCGTGGCCCTGGGCTTCCGGCACACGTGTGGGGGCTCTGTGCTAGCGCC 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 ACGCTGGGTGGTGACTGCTGCACATTGTATGCACAGGCAAGTCTCTGTGGCTGCTGAGGACAGAGAGCCTCAGT 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 TGCCCTTTCTGTTCGGCTGTTGGTATGTCCTGTATCAAATGTTCGTGTCCAACTGTCTCCAGCTTTTTGCTCCA 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 AAAGGGTAAGACTGGTGTTTGTGAAGTTCTCTCATTCAGTATCAAGAACAGATCTGCACAAATAACAGTAATAA 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 TATGAAGATTTGTTCTTTATATTCATCAGTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTTTGTTGCCCAG 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 GCTGGAGTGCAGTGGCGCAATCTTGGCTCACTGCAACCTTCACCTCCTGGGTTCAAGCGATTCTTGTGCCTCAG 4810
Query 1 ---------------------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGG 29
||||||||||.||||||.||.|.||||||
Sbjct 4811 CTGGGCACCACTATGTTCAGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCGCCATGTTGGCCTGGCTGG 4884
Query 30 TCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------------------- 72
|||.||||||||||||||||||||||.|||..|||||||||||
Sbjct 4885 TCTCGAACTCCTGACCTCAGGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATAACAGGCGTGAGCCACC 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 GTGCCTGGCCTCATTAGCTTTTAAGTGTTAAAAATACTTTCACATTCACAGTATCCTGTGTTTCTTCAGGCTTA 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 TCTTTGGTTCAATCATTTTCCATGTAATTATTTGGTTAATATGTTTCTTCCCCTTTAGATGGGAAGCTCTGCAG 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 GAGCAGGGACTCTCAGTCTTATTTACCACTAAATCTCTTTGTAGATTTATCCACTGCTGTGTCCCCAGGGTCTA 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 GAACAGTCCCTGGAATATAGTAGGTGCTTAATAAATATGACTTGGAGGAATGAATGAATGATGAGTGAATGAGC 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 TCTTTGATCTTCTCTTGGTGCCGGACAGGGCAGAGAGTGTAATCCCCATTTTACCGAGGCTGAGAGGGAGAAGT 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 GCCTCTCCCATGATCACACACAGTAAGTTGAGAGATGGGACCAGGGGAAGTTTTTCCAACACAAGGCCCTCTAT 5402
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5403 GTGTTTGTTATAAAACTTGGAGGGAAGTTATGCAGGAAAGAGGGAGTGGTGGTTGCAGATGACCCATAGTCTTC 5476
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5477 TCTATCCATCAGTCCTGCAGCATTTATTAAGCACCTACTGCATGCCCAGTGTCTTGCCGGCTGCTGGGGTGATA 5550
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5551 CTAAGAGGCATAGTCTGTGGGGCCTGGGAGCTCACCGCCTGCTGACGGCCCCCCCACCAATGGCTGCTCTGGCC 5624
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5625 AGCTTCCTCCACCTGCTACCTTGCTTAGGAACACCTCTTCTGCCCCTTCCTTCCCCGCTCAGCATGGCCCCTGT 5698
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5699 GTGCAGTTTCAGGCTGGCCCGCCTGTCCAGCTGGCGGGTTCATGCGGGGCTGGTCAGCCACAGTGCCGTCAGGC 5772
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5773 CCCACCAAGGGGCTCTGGTGGAGAGGATTATCCCACACCCCCTCTACAGTGCCCAGAATCATGACTACGACGTC 5846
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5847 GCCCTCCTGAGGCTCCAGACCGCTCTCAACTTCTCAGACACTGTGGGCGCTGTGTGCCTGCCGGCCAAGGAACA 5920
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5921 GCATTTTCCGAAGGGCTCGCGGTGCTGGGTGTCTGGCTGGGGCCACACCCACCCTAGCCATACTTACAGCTCGG 5994
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5995 ATATGCTCCAGGACACGGTGGTGCCCTTGTTCAGCACTCAGCTCTGCAACAGCTCTTGCGTGTACAGCGGAGCC 6068
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6069 CTCACCCCCCGCATGCTTTGCGCTGGCTACCTGGACGGAAGGGCTGATGCATGCCAGGACTCCCTCCTCTGAGT 6142
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6143 CCTGCTGTTTCCTCCAGTCTCACTGCACACCACTGCCTCATGCTTCCTGGGGCCTCCAGCAGCTCCACTAATGG 6216
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6217 AGGAGAGGCAGTAGCCTCCGACACAGAACGCATGGACCTCCTACTACTGTGTGTGAGGAACAGTCACTACCCAC 6290
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6291 TGGCCAGCCACCCAGCCAACAGGTCTCTCCTCTTGGGCCCTGATTTCAGAGTCCTCTTTCTCACTAGAGACTCA 6364
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6365 ATGACAGAAGAGAGGCTGGGACTTGGTTGGGCATGCTGTGGTTGCTGAGGGATGAGGGGGAGGAGAGAGGTAGG 6438
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6439 AGCTGGAGATGAAGAGGCTGCTAGAAGCAGCAGGAAGCCTGCCCTTCTGCCCTCTCCCCTCCCTGCCCCTGTGT 6512
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6513 GAGTCTTTTGGGAGGGTGCTGGGAGGTGCCCCCCGTCCCACCTTTTTCCTGTGCTCTAGGTGGGCTAAGTGCCT 6586
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6587 CCCTAGAGGACTCCATGGCTGAGAGGCTCCTGGGCAGATGGGGTCAAGGCTGGGCCAGCCCAGATGAAGCCTAT 6660
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6661 GGGAGTCAGGACCCTCTCCACTCTCCCTCTCCACTCCCCTTCCTGTTCTCACCTGGCTGTGGCTGGCCCTGTGT 6734
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6735 GGGGTGGGTACACTGGAAAACAAGAAGGTTGGAGTTGGTCTAGGACATTGGTTTTAAATGACAGTTCTGTGAAC 6808
Query 73 -------------------------------------------- 72
Sbjct 6809 TGGTCCAAGGAGTTCTGTTATTAAAGTGATATATGGTCTTGGTC 6852
