Nucleotide Global Alignment

Description

Query:
TRCN0000492083
Subject:
XR_001748856.1
Aligned Length:
4271
Identities:
65
Gaps:
4199

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAAGTTGTAGGCGGGGCGCGAGGTTCTAGTACCCGAGCTCATACTAGGGACGGGAAGTCGCGACCAGAGCCATT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGGGCGCGGGGACTGCAACCCTAATCAGAGCCCAAATGGCGCAGTGGGAAATGCTGCAGAATCTTGACAGCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCTTTCAGGATCAGCTGCACCAGCTTTACTCGCACAGCCTCCTGCCTGTGGACATTCGACAGTACTTGGCTGTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGGATTGAAGACCAGAACTGGCAGGAAGCTGCACTTGGGAGTGATGATTCCAAGGCTACCATGCTATTCTTCCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTTCTTGGATCAGCTGAACTATGAGTGTGGCCGTTGCAGCCAGGACCCAGAGTCCTTGTTGCTGCAGCACAATT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGCGGAAATTCTGCCGGGACATTCAGCCCTTTTCCCAGGATCCTACCCAGTTGGCTGAGATGATCTTTAACCTC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTTCTGGAAGAAAAAAGAATTTTGATCCAGGCTCAGAGGGCCCAATTGGAACAAGGAGAGCCAGTTCTCGAAAC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACCTGTGGAGAGCCAGCAACATGAGATTGAATCCCGGATCCTGGATTTAAGGGCTATGATGGAGAAGCTGGTAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AATCCATCAGCCAACTGAAAGACCAGCAGGATGTCTTCTGCTTCCGATATAAGATCCAGGCCAAAGGGAAGACA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CCCTCTCTGGACCCCCATCAGACCAAAGAGCAGAAGATTCTGCAGGAAACTCTCAATGAACTGGACAAAAGGAG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AAAGGAGGTGCTGGATGCCTCCAAAGCACTGCTAGGCCGATTAACTACCCTAATCGAGCTACTGCTGCCAAAGT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGGAGGAGTGGAAGGCCCAGCAGCAAAAAGCCTGCATCAGAGCTCCCATTGACCACGGGTTGGAACAGCTGGAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ACATGGTTCACAGCTGGAGCAAAGCTGTTGTTTCACCTGAGGCAGCTGCTGAAGGAGCTGAAGGGACTGAGTTG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CCTGGTTAGCTATCAGGATGACCCTCTGACCAAAGGGGTGGACCTACGCAACGCCCAGGTCACAGAGTTGCTAC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGCGTCTGCTCCACAGAGCCTTTGTGGTAGAAACCCAGCCCTGCATGCCCCAAACTCCCCATCGACCCCTCATC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CTCAAGACTGGCAGCAAGTTCACCGTCCGAACAAGGCTGCTGGTGAGACTCCAGGAAGGCAATGAGTCACTGAC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TGTGGAAGTCTCCATTGACAGGAATCCTCCTCAATTACAAGGCTTCCGGAAGTTCAACATTCTGACTTCAAACC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AGAAAACTTTGACCCCCGAGAAGGGGCAGAGTCAGGGTTTGATTTGGGACTTTGGTTACCTGACTCTGGTGGAG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CAACGTTCAGGTGGTTCAGGAAAGGGCAGCAATAAGGGGCCACTAGGTGTGACAGAGGAACTGCACATCATCAG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CTTCACGGTCAAATATACCTACCAGGGTCTGAAGCAGGAGCTGAAAGACCCCTGGCTTCCCTCATCATCTGTCT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTGGCTATCTGTCCCACAGGGCAGAACTGTAGGACTGAGGATCCATTATTGTCCTGGGCTGACTTCACTAAGCG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGAGAGCCCTCCTGGCAAGTTACCATTCTGGACATGGCTGGACAAAATTCTGGAGTTGGTACATGACCACCTGA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AGGATCTCTGGAATGATGGACGCATCATGGGCTTTGTGAGTCGGAGCCAGGAGCGCCGGCTGCTGAAGAAGACC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ATGTCTGGCACCTTTCTACTGCGCTTCAGTGAATCGTCAGAAGGGGGCATTACCTGCTCCTGGGTGGAGCACCA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GGATGATGACAAGGTGCTCATCTACTCTGTGCAACCGTACACGAAGGAGGTGCTGCAGTCACTCCCGCTGACTG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  AAATCATCCGCCATTACCAGTTGCTCACTGAGGAGAATATACCTGAAAACCCACTGCGCTTCCTCTATCCCCGA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ATCCCCCGGGATGAAGCTTTTGGGTGCTACTACCAGGAGAAAGTTAATCTCCAGGAACGGAGGAAATACCTGAA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ACACAGGCTCATTGTGGTCTCTAATAGACAGGTGGATGAACTGCAACAACCGCTGGAGCTTAAGCCAGAGCCAG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  AGCTGGAGTCATTAGAGCTGGAACTAGGGCTGGTGCCAGAGCCAGAGCTCAGCCTGGACTTAGAGCCACTGCTG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AAGGCAGGGCTGGATCTGGGGCCAGAGCTAGAGTCTGTGCTGGAGTCCACTCTGGAGCCTGTGATAGAGCCCAC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  ACTATGCATGGTATCACAAACAGTGCCAGAGCCAGACCAAGGACCTGTATCACAGCCAGTGCCAGAGCCAGATT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TGCCCTGTGATCTGAGACATTTGAACACTGAGCCAATGGAAATCTTCAGAAACTGTGTAAAGATTGAAGAAATC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  ATGCCGAATGGTGACCCACTGTTGGCTGGCCAGAACACCGTGGATGAGGTTTACGTCTCCCGCCCCAGCCACTT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CTACACTGATGGACCCTTGATGCCTTCTGACTTCTAGGAACCACATTTCCTCTGTTCTTTTCATATCTCTTGCC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CTTCCTACTCCTCATAGCATGATATTGTTCTCCAAGGATGGGAATCAGGCATGTGTCCCTTCCAAGCTGTGTTA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  ACTGTTCAAACTCAGGCCTGTGTGACTCCATTGGGGTGAGAGGTGAAAGCATAACATGGGTACAGAGGGGACAA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CAATGAATCAGAACAGATGCTGAGCCATAGGTCTAAATAGGATCCTGGAGGCTGCCTGCTGTGCTGGGAGGTAT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  AGGGGTCCTGGGGGCAGGCCAGGGCAGTTGACAGGTACTTGGAGGGCTCAGGGCAGTGGCTTCTTTCCAGTATG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  GAAGGATTTCAACATTTTAATAGTTGGTTAGGCTAAACTGGTGCATACTGGCATTGGCCCTTGGTGGGGAGCAC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  AGACACAGGATAGGACTCCATTTCTTTCTTCCATTCCTTCATGTCTAGGATAACTTGCTTTCTTCTTTCCTTTA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CTCCTGGCTCAAGCCCTGAATTTCTTCTTTTCCTGCAGGGGTTGAGAGCTTTCTGCCTTAGCCTACCATGTGAA  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  ACTCTACCCTGAAGAAAGGGATGGATAGGAAGTAGACCTCTTTTTCTTACCAGTCTCCTCCCCTACTCTGCCCC  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  TAAGCTGGCTGTACCTGTTCCTCCCCCATAAAATGATCCTGCCAATCTAATGTGAGTGTGAAGCTTTGCACACT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  AGTTTATGCTACCTAGTCTCCACTTTCTCAATGCTTAGGAGACAGATCACTCCTGGAGGCTGGGGATGGTAGGA  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  TTGCTGGGGATTTTTTTTTTTTTAAACAGGGTCTCACTCTGTTGCCCAGGCTAGAGTGCAATGGTGCAATCACA  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  GCTCACTGCAGCCTCAACCTCCTGGGTTCAAGCAATCCTCCTACCTCAGCCTCCTGGGTAGCTAGCACCATGGC  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  ATGCGCCACCATGCCCTATTTTTTTTTTTTAAAGACAGGGTCTTGCTATATTGCCCAGGCTGGTCTTGAACTGG  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  GCTCAAGTGATCCTCACGCCTTGGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACTGTGCTTGGCCAGGA  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  TTTTTTTTTTTTTTTTTTTGAGATGGAGTTTCTCTCTTGTTGTCCAGGCTGGAGTGCAATGGTGTGATCTCGGC  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  TCACTGCAACCTCCGCCTTCCGGGTTCAAGTGACTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGATTACAGATC  3700

Query    1  ----------------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGG  34
                                                    |.|||||||||||||||.||||||||||||||.|
Sbjct 3701  TGCACCACCATGCCCAGCTAATTTTGTATTTTTAGTAGAGACGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCG  3774

Query   35  AACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------------------------  72
            ||||||||||||||.||||||.|.|||||||.||||||                                    
Sbjct 3775  AACTCCTGACCTCAAGTGATCTGTCCACCTCGGCCTCCCAGAGTGCTGGGATTACAGGCGTGAGCCACTGTTCC  3848

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3849  CAGCAGGAATTTCTTTTTTATAGTATTGGATAAAGTTTGGTGTTTTTACAGAGGAGAAGCAATGGGTCTTAGCT  3922

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3923  CTTTCTCTATTATGTTATCATCCTCCCTTTTTTGTACAATATGTTGTTTACCTGAAAGGAAGGTTTCTATTCGT  3996

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3997  TGGTTGTGGACCTGGACAAAGTCCAAGTCTGTGGAACTTAAAACCTTGAAGGTCTGTCATAGGACTCTGGACAA  4070

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4071  TCTCACACCTTAGCTATTCCCAGGGAACCCCAGGGGGCAACTGACATTGCTCCAAGATGTTCTCCTGATGTAGC  4144

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4145  TTGAGATATAAAGGAAAGGCCCTGCACAGGTGGCTGTTTCTTGTCTGTTATGTCAGAGGAACAGTCCTGTTCAG  4218

Query   73  -----------------------------------------------------  72
                                                                 
Sbjct 4219  AAAGGGGCTCTTCTGAGCAGAAATGGCTAATAAACTTTGTGCTGATCTGGAAA  4271