Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- XR_001749585.2
- Aligned Length:
- 4419
- Identities:
- 67
- Gaps:
- 4347
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTACGCCGCTGATGTGGAGTAGGGCCGAGCGCGGAACGCGAGGGGCTGCTGGGGTGTTTGTCGCAGCGGGTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCTCGGCGGTTTGCGGAGCTGCTAGGATGGAGCAGGTTGCGGAGGGAGCAAGGGTGACCGCAGTCCCTGTGTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCTGCCGACAGCACTGAGGAGTTGGCCGAAGTCGAAGAAGGAGTTGGAGTAGTGGGCGAAGATAATGACGCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCGCGAGAGGAGCGGAGGCCTTTGGCGACAGTGAGGAGGACGGAGAGGATGTGTTCGAGGTGGAGAAGATCCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GACATGAAGACCGAGGGGGGTAAAGTTCTTTACAAAGTTCGCTGGAAAGGCTATACATCGGATGATGATACCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGAGCCCGAGATTCACCTGGAGGACTGTAAAGAAGTGCTTCTTGAATTTAGGAAGAAAATTGCAGAGAACAAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCAAAGCAGTCAGGAAGGATATTCAGAGACTATCCTTAAATAACGACATATTTGAGGCGAACTCTGATAGCGAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGCAAAGTGAGACAAAAGAAGATACTTCCCCAAAGAAGAAAAAGAAAAAATTGAGGCAGAGAGAAGAGAAAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCCAGATGATCTGAAAAAGAAAAAAGCAAAGGCCGGGAAGCTAAAAGACAAGTCCAAACCAGACCTGGAGAGCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTTGGAAAGTTTAGTTTTTGATTTAAGGACAAAGAAAAGAATTTCTGAAGCCAAAGAAGAACTAAAGGAGTCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAAAAGCCCAAAAAAGATGAAGTAAAAGAAACAAAAGAATTAAAGAAAGTTAAAAAGGGTGAAATAAGAGATTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAAGACGAAAACAAGAGAAGATCCCAAAGAAAATAGAAAAACAAAAAAAGAAAAATTTGTCGAATCCCAGGTGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATCTGAATCAAGTGTACTTAATGATTCTCCCTTTCCAGAGGATGACAGTGAAGGGCTACATTCCGACAGCAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAAGAGAAACAAAACACTAAAAGTGCAAGAGAGAGAGCAGGGCAGGACATGGGGCTGGAGCATGGCTTTGAGAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCCCCTAGACAGTGCCATGAGTGCTGAGGAGGATACCGATGTCAGAGGCAGGAGGAAAAAGAAGACCCCGAGAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGGCTGAGGACACTAGAGAGAACAGGAAGCTAGAGAACAAGAACGCTTTCTTAGAGAAGAAAACTGTGCCTAAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAGCAGAGGAATCAAGACAGAAGCAAAAGTGCTGCAGAGTTAGAGAAGCTGATGCCTGTATCTGCCCAAACGCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAAGGGCCGGAGGTTGAGCGGGGAAGAGAGAGGCCTCTGGTCCACGGACTCAGCCGAGGAGGACAAAGAAACCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAAGAAATGAATCCAAAGAAAAATATCAGAAAAGGCATGATTCTGACAAGGAAGAAAAAGGCAGAAAAGAGCCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAAGGATTAAAGACACTTAAGGAAATCAGAAATGCATTTGATTTATTTAAATTAACTCCAGAAGAAAAAAATGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGTTTCTGAGAATAATCGGAAAAGGGAAGAAATACCACTGGATTTTAAAACCATAGACGATCACAAAACCAAGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AAAACAAACAGTCACTTAAAGAAAGGAGAAACACCAGAGACGAAACGGATACTTGGGCATACATTGCTGCAGAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGTGATCAGGAGGTTTTAGACAGCGTGTGCCAAGCAGATGAGAATTCAGATGGCAGGCAGCAGATTCTGAGTTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGGCATGGACCTGCAGTTGGAATGGATGAAGTTGGAAGATTTCCAAAAGCACCTTGATGGGAAAGATGAGAATT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTGCTGCAACAGATGCAATTCCAAGTAATGTGTTAAGGGATGCTGTGAAAAATGGGGATTATATTACTGTAAAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTTGCACTTAATTCAAATGAAGAATATAACCTGGACCAAGAGTAGAGACGGGGTTTCACCATGTTAGCCAGGAT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GGTCTCGATCTCCTGACCTTGTGATCTGCCTGCCTCCGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCGCCTGGCCACGTATGGATTTTTTTAATGGAAGCATATTGACCCTTTCTCCCTAGATTTTAGGATTCCAGTGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AATGACACTGGTGATGCTTGCCGCCGCCGGAGGGCAGGACGACCTCCTGCGACTCCTCATCACAAAAGGCGCGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AAGTGAACGGTCGGCAGAAGAACGGGACCACCGCCCTCATTCATGCTGCAGAGAAGAACTTTTTAACAACAGTG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCTATTCTTTTGGAAGCAGGAGCTTTTGTAAATGTCCAGCAAAGCAATGGTGAGACTGCACTGATGAAGGCCTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TAAAAGAGGAAATTCAGACATCGTACGACTCGTAATTGAATGTGGAGCTGACTGCAATATTTTGTCAAAGCACC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGAATAGTGCCCTGCACTTTGCGAAGCAGTCTAACAATGTGCTTGTGTACGACTTGCTGAAGAACCATTTAGAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACACTTTCAAGAGTAGCAGAAGAGACAATAAAGGATTACTTTGAAGCTCGCCTTGCTCTGCTAGAACCAGTTTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TCCAATCGCATGTCATCGACTCTGTGAGGGTCCAGATTTTTCAACAGATTTCAATTACAAACCCCCACAGAACA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TACCAGAAGGCTCTGGCATCCTGCTGTTTATCTTCCATGCAAACTTTTTGGGTAAAGAAGTTATTGCTCGGCTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGTGGACCGTGTAGTGTACAAGCTGTAGTTCTGAATGATAAATTTCAGCTTCCTGTTTTTCTGGACAGTCATTT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGTTTACTCATTCAGCCCTGTTGCAGGTCCCAATAAACTCTTCATAAGGTTGACAGAAGCACCCTCTGCCAAGG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TTAAGTTGCTAATAGGTGCATACAGAGTGCAGCTGCAGTGACCAAACAGAAGGGACTGGGCGGAGTTCTCTTCA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GACCGATTCCTATACTCTCTTTGACAGCAGTTTGGAATTCTTCTAGCACATCTATGTAAAGTTTTGTCTGTAAA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CCTCTTGCAGTTAAGCCTGTTGTCTGTTGTAGTCTGTAAGATGCGACATAGCTGTGTCTGTGCCAGTATGCCGG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AATCTCAGTGCAGTGTCCAGACTGCGTATTTCAGTTTTTCCACAATGTGGATAGTACATATGAGGATTATTTAA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GAAAATTAAAGACTTCACTTTCTTTTTTCTGGAGACGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TGCGATCTCGGCTCACTGCAAGCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTG 3256
Query 1 ----------------------------------------------------ATGGGGTTTCTCCATGTCGGTC 22
|||||||||.|||||||.||||
Sbjct 3257 GGATTACAGACACCCGCCATGGCACCCAGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTATCCATGTTGGTC 3330
Query 23 AGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------------ 72
||||||||||.|||||||||||||||||||||||||||.||||.||||||
Sbjct 3331 AGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTTGGATTACAGGCATG 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 AGCCACCGCACCCAGCAAGAGTTATTTTCTTAACTTGAAATTTTCTACTAGCCCTGGTGAACTTCTGTGCTTAA 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 AAAAAAAAAAAAAAAAAGGAAAAATTCAGCTCTAAAACATTTGCTTACAGCAAGGGAGCCATGTTATATTCAAG 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 TTACCCAAGCACCAAATAAAGTGTGGGTTTGCTGCCCTTGAAAGGGTTGGGAGGCCTGATCTTTTTCTAGTAGA 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 CAGTTGCCACACATTCCCCAAGCACAAAAGGTGGAGATGGCAGTCACTTTGTAAATATGCTGTAGTCACTTATC 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 ATCTTTTCAAAGGGTAACAAGAGAATCTAAGATGTAGTAAGAATGTAAACCAGTACACTATGAGACCTAAAAGA 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 GAGTATTAAATGTGAACTTTTAGCAGAGCGTGGTGGCTCACACCTATAATCCCAGCGCTTTGGAGGCTGAGGTT 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 GGAGGATTGCTTAAGTCCAGGAGTTCAAGACCAGCCTGGGTAACATGGGGTGGAACAAGCCTGTAGTCCCAGAT 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 ACTCAGGAGGCTGAGGTGAAAGGATTGCTTGAGCCAGGGAGGTCAAGGCTGCAGTGAGCCGTGAAAGGCCACTG 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 CACTCCAGCCTGAGTGACAGAATGAGACCTTGTCTCAAAAAAAAAAAAAAGTTTCTTGGAACCTATACGGTTTT 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 TTTTTGTTTTTTTTTTTTGAAAAGCCAGACCTTGTGCCCTTGTTTTGAACACCGACTGGGAAGATGGGGCTTAG 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 GTAACAGCCAAACCTGGCTGTCAGCTGTGTGGGAGCCACCACCCTCTCTGGGAAGAGTTCCTGCTTCTGTATGG 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 CAAGCATAAATCAAGCTCAGTCTGGGTTATGGAGAAGTTGAAAATTGTTTTGTTCCTCATTAGTTTATAATTGT 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 ATGAAATACGATTTTAATGAAAACTTTTCAGAATTCACGTTTGTGTAGATATTTCAGAGAACCATTTTTACTTT 4366
Query 73 ----------------------------------------------------- 72
Sbjct 4367 ACATCCTAAAACTGCCTTTTCCTATGGTTTTGTCAATAAAACACTATGATGTT 4419
