Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- XR_001749938.2
- Aligned Length:
- 5412
- Identities:
- 64
- Gaps:
- 5340
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGTTTTGCTCTTGTTGCCCAGGCAAGAGTACAATGGTGCAATCTCTGCTCACTGCAACCTCCGCCTCCCAGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCAAGCGATTTTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGTGCCACCATGCCTGGCTAATTTT 148
Query 1 ---------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCC 59
||.||||||||||||||.|||||||||||||..|||||||.||||||||||||||||||
Sbjct 149 GTATTTTTAGTAGAGATTGGGTTTCTCCATGTTGGTCAGGCTGGTCCTGAACTCCCGACCTCAGGTGATCCGCC 222
Query 60 CACCTCAGCCTCC------------------------------------------------------------- 72
|.||||.||.|||
Sbjct 223 CGCCTCTGCTTCCCAAAGTGCTGGGATTACAAGTGTGAGCCACCGCGCCCAGCCGGAATTACATTTTTTTTTTA 296
Query 73 -------------------------------------------------------------------------- 72
Sbjct 297 AAAGCGTTTTGTATCATTCTGCTAATTCACAGTAGATTGCAAATATGCAACATTGTTATTTCAATTTTTTTCTA 370
Query 73 -------------------------------------------------------------------------- 72
Sbjct 371 TGAATCTGAACAAAATCATACGTAAAAAACTTCAATGTGAGTTTTAATTTCTTAATTTTAAAAAACCAAACCAC 444
Query 73 -------------------------------------------------------------------------- 72
Sbjct 445 AATTTTACTATTTTTGCAAGAAAGATAAATCACATAAGACTTACCTATACAAATAATTCAACTATAAATTTACC 518
Query 73 -------------------------------------------------------------------------- 72
Sbjct 519 TTTTTACAAATTTTCTTCTTTGGAAGCAGCAGATATGTAAAATCATTACATATTATGTTCATGCTGTATGTACA 592
Query 73 -------------------------------------------------------------------------- 72
Sbjct 593 TAAAATGGACTACAGACCCCAAAAGTAAATTCTTTGGAGATTTGGTTCCAAAGAGGGAAAACAAACCCTCTTTG 666
Query 73 -------------------------------------------------------------------------- 72
Sbjct 667 TCTGAGTATGTGAAAGGTACCAAAAAAGAGTGAAAACCAGTTTTCCTCTTTTTTTTTTTTCTTTACTCTTTTGT 740
Query 73 -------------------------------------------------------------------------- 72
Sbjct 741 TTTTGTAGGAGAACCAGCAGTGGAAGAAAAGATCACTTCCTTTGTAGACACTTTATGGGTTTCGGATTCTGTAA 814
Query 73 -------------------------------------------------------------------------- 72
Sbjct 815 ACTCTGGCACATAACTTGACCCCAAAGTTAATGAAATCCTGTTAGACTTTCCCTGCCCTCCTTCCTGCTTCCAT 888
Query 73 -------------------------------------------------------------------------- 72
Sbjct 889 CCTTCAGATTATCTCACGTTTTAAAAATTCAATTTCTATTTGTATACACGTGATCTTCATGTCATTGGCTTTTT 962
Query 73 -------------------------------------------------------------------------- 72
Sbjct 963 ATGCAGACACATTTCACCTACATCCTTTCCTTCCCTCATCTGGCAGCCAGTTGAGCTTCTTCCTGCCTTGAATA 1036
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1037 CCACATTCCCTAGTTCTTCAAGCTCAGTCATTAGCACCCTGTCCCCCTACTAAAATTATGAATGAAAAGCCTTG 1110
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1111 TTGTTCTTTACAAATAACTCAGGCTGCCTCAGTCAGTCAAATTCGAATGGAAGTGACTGCCAGACAAAGGGGCG 1184
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1185 GGATGATGGACAGTGCTCACAGCAAGTCATCAATGCCCACAGGAAGTTTTTTAAGCCACAGTATAGGTAGAGAG 1258
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1259 GCTTGGGCGTTCCCAGAGGACAAGCTTACAGAAGGAGGCTGGGAGGTGGGGGGAGGGGGACTTTCTGTGTCTGT 1332
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1333 TTGGAACTTAGAAAAAACTTCCATGAAGCTCAGAGATAACAATGTACAGAGTCAGTTTTGCCCTACCAAGAACT 1406
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1407 TAAAAATCCAGCCGTGGAGACATCTACACCTTGCAGTAATTCTGGTTTGCACCGACACACACAGACAAAAGTGA 1480
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1481 AGGCACCAACCATTTACTTGGTTTTGAATGCTGAACGGTGCAAGGGTGGCTTACATACTTGGAGCTGCACAACT 1554
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1555 CCCTGCTGAGAAGTTGCATTGTCTTGGGCCCCTCTTTCACAACAGGGGAAAAGGTAATTGACAGCCCGATTGTT 1628
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1629 TGGCTGGGACCCCTGCTGTTTTAAAATCCTAGAAGGCCCCAGTCACACGTTGTCAATAATAGCCGTCGGAGGTG 1702
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1703 AGGAGTGAAGAAGGGCTGTTCAGGAAACAGTTTGAGCCCTTCAAGTGGACAGGCCTCAGTGACTTCTGCACTCT 1776
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1777 GGCTCCCACAAGCAGCTCATTCAAAAATAACCTTAAAGTAATAAATCAAACTTGTTTCCTGAACTATACAAGGA 1850
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1851 ACAGCTGGTTATTTTTCCTCACTTTTTTTTTCCAAAAGCCAAAAAAAAAAAAAAAAAAAAGAATGAGATTTTAC 1924
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1925 TACAGGAAACCAAGCATGTCAAAATTTGGCAAAGCAATTTGGATGATTTAACAGTTAAACACTTCTCTTTTTAA 1998
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1999 TGTTATGCTTTCATCAGTCTTTTTTATTTAAGCTTTTCAGTTTTGCATTCTGTTTGCTGCAATTAGTGTCCCTT 2072
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2073 ATCTGTTCACTCCCTACTTTTGAAAGGAAAATGAGTTTAGGATCCTGTCTTTAGAGTATTTTGCTGTGTAATTT 2146
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2147 CTAATGTACTGGTCAAGTAGCTCAACTTATTTTACAGGTAAAATTTGTTTTCTTCCACAGAGTTGAGTTTGGAT 2220
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2221 TTAGATCTACAGCTCCACATATTTGTTTCTCCTGAGACCCATATATTTTGGAGTTCTGATGACAAGGCAGTTTT 2294
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2295 TCTTTAGTCTATTGATTTAGGAACCCTGACCTAGGAGTGCATATGCTGTAACTGAAGTAGTCTGGTGCTTTAAC 2368
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2369 ATTTTCAGCTTCAAACATGTGCTACCTGACTAGATGGAATTCCTTGAGAACTGTATTAACATGTTTCAAAGAGT 2442
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2443 TGAATTAACAGATGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGCTGCGATCTCGACTCACCGTAACC 2516
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2517 TCCGCTTCTGGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTAGAATTACAGGTATGAGCCACCAC 2590
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2591 ACGCCCGGCCAGTATTGTGAGTTTTAAAGAATGCATTTTAATATGTTTCACTTTTTAAAGCTCCTAAGTGGTTT 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 TGTTGCTAATTTTTTTAAATTTTGTTTTGTGAAGAGATTGGTAACATAAATTGTAAAGCAGAAATTAATTCACC 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 TAGCTTTCCTCATCACAGTTTAAGACGGATATTTGTGTTCTGGTTTGCTTATTTGTTTTTCCGGGTCCACACAT 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 TCACTCATATGTGTTTAGATTTTTCATGTGGAAGGCAGTGATATAATTTCAGGCCTATATGTTTTGACCCTCTG 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 TTCACACATGGTTGTTATATGCCCTGACATTGTGTTTACTTCACATTTCCTATTTTTCCACTGTATATCTGAGG 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 ATATTTCATGCTATTTTGTTACCTAAAGAGAGGCTACTGCTACATGGGGAGACATATATACATATATGTAGGAG 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 TACACCTATGTGTGCATGTGTGTGTATTTATAAATCTCTCTCCATGTAGCAGTACACATATATATATGTATATA 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 TAATTTGTTTTTATGAGAAGGATGTGAAAAGATACACAAGTCTGTTTATAATACAGATCTGAAGGAGAGATAGG 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 CAAATATTGATTTAAAAAAAATTTCCCCTGATTTGTTTCACTTTGTACAACAAACAGGTATTACTTTCTTAATT 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 AAAAACATCAATAAAAAATGTTTCAATACTGATTAAAAACAGTTAAAGAGGAAATTTAACAGTGGCAAATAATA 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 TCTGTATTTTATAAGGGTTTTGCCAGTCTTGACAAAGTATCTAGAAATTCGCTAAAAGACAGTTTCTTTTGTTT 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 TTCAGAGCACACATTAAAAAAAAAAAAAAATCGCAATGATTAGTGCTCCCTCTGCTGGTTTCCCTGCAACAGTT 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 TGTTGCGGTGATTTGGGAGGATGAAAAGACAGCAAGGAAAATTCTGTTACTTTTGGTCTTTAAACATTATTTCT 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 ATATACAAGTGTTATCCTTGATTGGTAGCAAATGCCAATGTAGTTTCTGAAAATTTATTCTTTCTTAAAATTCA 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 ATAGTGATTCTGAAGTTGGGCTAGATAATTATAATCCTTTTAAAATTAATTCCTCCTTTCTTATATCATGAAGC 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 AGGACATAAAGCATAACAATTCTTATTTATTGGGATTTTTCTTGGGTAGGAGTTAACCTTATATAGCTAACTCT 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 CAGTAACTTGACCTAGCAGTAGTAAAGTTGGCTATTTGAACATCAAGCTGACACTCTAGTAAGCAAAATAGAGG 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 TTTGGAGTGACATTATCACTGGAGAATTACATTCTGTAATTGAACACTTTGCTGTATCATTATTTTAGTCTACA 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 TCATCCTATGTGAAAGATATTTGGAAATTGCATAGTTGATTTAATTTATCTTGATATCCATACTATAATTAAAG 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 ATTCTTAGAATTCATTGGATTCATCAATTTGCTCTCTGTGAATTTGTACTTTCATGAATCAGAGTATGTTGATC 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 CATATACAGTGTTCATTTAACTAATACTTGTATTAAATCACTTCTAAATGCTTATTATACCCTGTATTATAGTA 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 TTATATTCTGAGTCTTAAAGGTGCTTAATGTGAAGATTCTCTCTCTACATATTCAACTCTTACTAACTTTTGGC 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 TTTAGGTAGAAATCAGTTAGTGTATTATATGATAAAATAGGAAACTATTTCCCTAGGGGTATAGGTATTCAGTA 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 GGGAGCTTTGGAGTCTCAATGAGCTTCTTAAAGAAGCATTTTTAATGGTAGGTTTTAGGGAGAGTTTTTGTAGT 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 AAGATAAAGTAGATGAGAAAGTGTTGCCTCTAAACAATCAACAAGCTGGGAATGGGGTGCAGAATGAGGAGAAC 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 CCTAAGCAATAGGCAATAAGGAGTGAAAGGAAGGAGGTGTCACTCATTGGGAAAGAAAAGGAACTGTATGTCCT 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 CTACTGAGAGCTGCTGTCTTCTTAAAAGTCATTTTTGTGAGGTGTGCTTGCGGAATGGTAAAACAGAAAGGAAA 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 TAACAGAGTAGAAGGTCAGATCTCCCAAATCAACCTTACTCATCACTGGTGTGCAAGATACCATCATCAGATCA 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 TTTTAACACTCTGGAAAATACCACGGAGAGGTTTAGCAAGTGACAATTAACATCAGGGAGAAGCAGTTTCTAAT 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 AAGGAGATCCAGCCATTGCTGCTGGAGTTTAGATGTGGAATTTCTAGGCTCTGGAAAGTGTAGAGGCAGAAATG 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 AGGTGATTACTTTCCTCTCCATCATAAGCATTATGGCTAACACCCCTATAACAAAGGCAGGTTATCAAGAAAAA 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 AGAATAATACATTTATTTAAGCACAGTTTGATATGATATGGGAGGCTTCAGAATGAAGACCCAAAGATGCAGGG 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 AAAATTGTTGCGTTTTATGCTGATGTTCAATGAAGTATGGATAGCCATATAAAATATGATTGGACAAAAAGGAT 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 AAAATCTAATGCTTTGATGCTAATAGACAGAGTCAGGAAACTCGGCAAAGCCTGTCCAGATTTTTCTTGGTCTT 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 TCTGTACAGCATTATTTTGTTGACAAAAAAAGCCAAACTCTGTAAGATATTTGAAGAGGTTTATTCTGAGCCAA 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 ATATGAGTGGCAGGGCCTTTGACACAGCCTCAGGAGGCCCTAAGAACATGCACCTAAGAGGATTGTGTTACAGC 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 TTGGTTTAATACATTTTAGGGAGACAGAAGTTATAGGCATGTAAGGTATACATTGGTTTGGCCCAGAAAGGTGG 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 GACATCTCAAAGTGAGGGGGGAAGGTGGGGAAGGGGAGCTTCTTCGTCATAGATGGATTCAAAGATTTTCTGAT 5402
Query 73 ---------- 72
Sbjct 5403 TGACAATTGG 5412
