Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- XR_001750406.2
- Aligned Length:
- 7314
- Identities:
- 64
- Gaps:
- 7242
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGTTTTGTGTGTTAGAGAACGTCGCGGAGGAGGTAAGCGTCGCTTGGCGCCTGGCCGCCGCGGGCAGGATACA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGTGGGCCTGAGGCGCGAGCCCGGCGGCGTGCGGCCCTCTCTCCGCGCGGAGCCGAGCCGGAACTGCGGCAGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCTCCCTGCCAGGCTCTTCATCCAAGGTTTCTGTGGATCCCTTCTGAAGTTCTATCTGAAAATTGCGCTTAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGAATTTTCTGTTAGAAGAACTTGGTTGCTACTTTCTTGTCAAGATGATTGCAACACCTTTGAAACATTCAAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATTTACTTACCTCCAGAGGCATCTTCTCAAAGGAGAAATCTACCCATGGATGCAATCTTTTTTGACAGCATTCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTCAGGCACACTTACTCCTGTAAAAGATTTGGTGAAATATCAGAACTCCTCCTTAAAATTGAATGACCATAAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGAATCAGTTCCTAAAAATGACAACTTTTAACAATAAAAATATATTTCAATCAACTATGCTAACAGAGGCTACT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACCTCTAACAGTTCTCTTGATATCAGTGCTATAAAGCCCAACAAGGATGGATTAAAAAATAAAGCAAACTATGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATCACCAGGAAAAATATTTCTAAGAATGAAAGAAAAAGTACTGCGTGACAAGCAAGAACAGCCATCAAGAAACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTAGTTTGTTGGAACCACAGAAAAGTGGAAATAATGAAACCTTCACTCCTAACAGAGTTGAAAAAAAAAAATTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAGCATACCTACCTATGTGAAGAAAAGGAAAACAACAAATCATTCCAGTCAGATGACAGTTCACTAAGAGCCTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGTCCAAGGAGTTCCTCTAGAATCATCAAATAATGATATTTTCCTCCCGGTCAAACAAAAGATTCAGTGCCAGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGGAAAAGAAAGCACCACTGCACAATTTAACTTACGAACTTCCAACTCTGAACCAAGAACAGGAAAATTTTTTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCTGTAGAAGCCCGAAACAAGACATTAACTAGAGCTCAGTTGGCTAAACAAATTTTTCACTCAAAGGAGAGTAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGTTGCAACCACTAAATCCAAAAAGGACACGTTTGTTTTAGAAAGCGTTGATTCTGCTGATGAACAATTTCAAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATACTAATGCTGAGACTCTCAGTACTAATTGTATTCCTATTAAAAATGGCAGCCTGTTAATGGTTTCTGATAGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAGAGGACAACAGAAGGGACTTCGCAACAGAAAGTTAAGGAAGGAAATGGAAAAACAGTGCCTGGAGAGACAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCTTCCAGGTTCCATGAAAGATACATGTAAAATTGTACTTGCAACACCAAGACTTCATATAACAATACCTCGGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGTCAAAAAGAAATATTTCAAAGCTTTCTCCTCCAAGAATATTTCAAACTGTTACAAATGGACTTAAAAAAAAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CAGGTAGTTCAGCTACAGGAATGGATGATTAAAAGCATCAATAATAATACTGCTATATGTGTAGAAGGAAAATT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GATAGACGTCACTAACATATATTGGCACAGTAATGTAATTATAGAGCGGATTGAGCACAACAAACTTAGGACTA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TATCAGGCAACGTTTATATATTAAAAGGCATGATAGACCAAATTTCCATGAAAGAAGCAGGATATCCAAATTAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTCATAAGGAAATTTATGTTTGGATTTCCAGAAAATTGGAAAGAGCACATTGATAATTTTCTGGAACAATTAAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGCTGGTGAAAAGAACAGGGAAAAGACCAAACAAAAACAGAAAACTGGAAGATCTGTCCGTGACATAAGGAAAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAATGAAAAATGATGCACGAGAAAACCAAACAGATACTGCTCAAAGAGCCACCACCACTTACGATTTTGATTGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GATAATTTGGAACTGAAGAGTAATAAGCACAGTGAGTCACCAGGAGCTACAGAATTAAACATGTGCCACAGTAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTGCCAAAATAAACCAACATTAAGGTTCCCAGATGACCAAGTAAATAATACTATTCAAAATGGAGGAGGAGATG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ACTTATCTAATCAGGAATTAATTGGAAAAAAAGAATATAAAATGTCTTCAAAGAAACTAAAAATTGGTGAAAGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ACAAATGAAAGGATAATAAAAAGTCAGAAGCAAGAGACAACTGAAGAATTGGATGTATCCATTGATATTCTAAC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTCAAGGGAACAGTTTTTCTCAGATGAAGAAAGAAAATACATGGCCATCAATCAGAAGAAAGCTTATATTTTAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TAACACCACTTAAATCTAGAAAAGTGATAGAGCAAAGATGCATGAGGTATAATCTGTCCGCTGGCACCATCAAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCAGTAACAGATTTTGTAATACCAGAGTGTCAAAAAAAAAGTCCCATCAGCAAGTCCATGGGGACTTTAGAAAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TACATTTGAAGGTCATAAAAGTAAAAACAAGGAAGATTGCGATGAACGTGACTTACTTACTGTCAACCGGAAAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TAAAAATATCTAACCTTGAAAAGGAACAAATGCTCACCTCTGACTTTAAGAAAAATACCAGACTATTACCAAAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTGAAGAAAATAGAAAATCAGGTAGCTATGTCATTTTATAAGCATCAGTCCTCACCAGATTTGTCAAGTGAAGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AAGTGAAACAGAAAAGGAAATTAAAAGGAAAGCTGAAGTTAAGAAAACCAAAGCAGGAAACACCAAAGAAGCAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGGTTCACCTGAGAAAGAGCACAAGAAACACAAGTAATATTCCAGTGATTTTGGAACCTGAAACTGAAGAAAGT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GAAAATGAATTTTATATCAAACAAAAGAAAGCTAGACCTTCCGTCAAAGAAACTCTTCAGAAGTCTGGTGTTAG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GAAAGAGTTTCCAATTACTGAGGCAGTAGGATCTGATAAGACAAATAGGCATCCCTTAGAATGCTTACCTGGTT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TAATTCAGGATAAGGAATGGAATGAGAAGGAGTTACAGAAACTTCATTGCACAAACCTGGTTTCTGGTCAGAGG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TAGCTGCGGCTGTAGGTTCTCGATCTCCTGAAGAATGCCAGAGGAAATACATGGAAAATCCCAGAGGAAAAGGA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TCCCAGAAACATGTCACTAAGAAGAAGCCAGCCAATTCCAAAGGCCAAAATGGCAAGAGAGGTGATGCTGATCA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GAAACAAACTATTAAGATAACTGCCAAAGTGGGAACTCTTAAAAGGAAGCAACAGATGAGGGAATTTCTGGAAC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AGTTGCCAAAAGATGACCATGATGATTTTTTCAGTACAACACCTTTACAGCATCAAAGAATACTGTTGCCAAGT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TTCCAGGACAGTGAAGATGATGATGATATTCTGCCAAATATGGACAAAAATCCAACAACTCCATCATCAGTTAT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CTTTCCATTGGTAAAAACTCCTCAATGTCAGCATGTCAGTCCTGGCATGCTAGGTTCTATAAATAGGTAAATAT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TCATGCATATGATATGTTAATTCTCTGCATCAGAGTAGTGAGGAACATTTAAACATTTCATGAGGACCATAGAT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 GCCAGTAATGGGAAGAGGCATTATTTAAAAAATCAAGAATGTGTAGTTTCTAGAAGTTAAGGATGGACAAGTTC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 ATCAAATCGGGGTGCTATTCAATAAACAGCATTGTGATATAACCCACATTTACTTCTGGATCAATTCGAAATGG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 ATCAAGGTTTTACTTGTAAAAAACTTTAAAAAAAAAAAACTAAAGAAACCTTGGAGAATTATTTTATAATACCA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 GATTAGTGATGGTCTTTCTAACTATACTATAAAACCTACAAGCCATTAATGAAAAGATGAATAAAGTCAACTGT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GTAAAAATGTTTAACAAATTTTACCTGGTACCAACCACTACAAACAAAAGACAACCTGAGAAAAGAATATATGC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 AACTTGTCACAGGCAAAAGGCTAATTTCCGTAATATATACAGCATTCCTACAAACTAACAAGGAATGCATTGTT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 AATTTTTGTGCATTGCTAGTGAGAAGGTAAAGTAGTGCGATCTTTGCAGCAACAATTTGTAAGTATCAAAATTA 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TAAATGCACATGCCCTTTGACTTAGGAATTTTACTTATAGAATTGTGAATGTACAGCTTATTCATTGTAGCATT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GTTTAAATGGCAGTACCTCAAAAATCTATCAGTAGGGACTAATTAAATGAACTCTGGTCCATTATATAGTCATA 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 GAAATTAATGAAGAGCCAGGCACAGTGGCTGAAGCCTGTAATCCCAGCACTTTGGGAGGATCACTTGAGCCCAG 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 GAGTTCAAGACCAGCATGGGCAACATAGGAAGACCCCATTTCTACAAAAAAAACCCAAAAATGTTAGCAGGATG 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 CAGTGGGGCAAGCCTGTGGCCCTAGCTACTAGGGAGGCTGATGTAGAAGGATTGCTTGAGTCCCAGAGGTGTAG 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 GCTGCAGTGAGCTGTGATTGCAACAATTGCACTCCATCCTGGGCAACAGAGTGAGATCCTGTCTCAAAAAAAAA 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 AGAAATTAATGAAGATATTTTTTATTGCTATTATGATAAAATGCCTAAGATATATTAAATGAAACAAAGGTAGA 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 TGCAGTGAATAATATACTACTGTTTGTGTAAATAGAAGCTATATGTATGTATGCATATATGTATATACTTGTGT 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 GTGTGTGTGTGTGTATAATTGCTTTTATTAGATTAAGTCTTTATAAAAGGATGCATAAGAAACCAAAACATTGG 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 TGATCCTTAGGGAGAACTAAGGTAGCTGGAGGAAGGAGAGGGGGGCTTTTGAATTTTGAACCATGTGAATACAA 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 GAACAATTTGAAACATATAAATAAATAAAATTAAGAAAAAAGTAGGGGTGACTAACAATAAAATGTCACCAAAA 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 AAAGATGGAAAATAGTAAGAATGAGGCCTGAAAATAGGCTATTCCATTTGGCAAGTAAGAGGCCATTGCTGATC 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 TTAGAGCAATTTCCACAGAATGAGAGGCAGAAGCAAGATAATAGTGACTGAGAAAAAAACTATTCAGTACTCTC 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 AGGAAGCTTGCTAAATTGCTAAAATTTTAATTTGCACTTATTGGATAAAAATATAATTTTCCTAGGCATCTAAA 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 AATTATTTTTAGTATTTAGTGCAGGGGAAAGCATACTGAGAATACTATTTTGGACAAATTTTTTGATAAGCACT 5106
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5107 TTGACCAGTTCATCAAAAGCCTTAAAATATTCATCCGTGGCCGGGCGCGGTAGCTCACACCTGTAATCCCAGCA 5180
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5181 CTTTGGGAGGCTGAGGCCGACGGATCACAAGGTCAGAAGTTCGAGACCAGTCTGGCCAACATAGTGAAACCCCA 5254
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5255 TCTCTACTAAAAATACAAAAAATTAGCCGGATGTGGTGGTGTGTGTCTGTAATCCTAGCTACTCAGAAGGCTGA 5328
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5329 GGCAGGAGAATCACCTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATCACGCCATTGCACTCCAGCCTGG 5402
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5403 GTGACAGTGCGAGACTCCGTCTCCAAAAAAAAAAAAAAAAAAACAACTTCATCCTTTTGGCCGTTGAATTTTAT 5476
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5477 TAGACACTTTAAGGAAATATGAGATTTGGAACACAGATGTTCATCATAAAACATAATACTGAAAGTTTGAGAAT 5550
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5551 GACCAAAACATCCAAAAATAAGGAAAGTTATAAATTAAGATTTATCCATATAATGGAATATGAAACAAATCATG 5624
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5625 TCTTCAAGAATTTAATGACAGAAAAATGTCCAGTGGATAGTAGTTTTCAAAAGCTAGGAAAACTACATTCAGCA 5698
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5699 TGATCCCAATTTTATGTAACAAATTCGTAAGGAAGGAAATTTCTTAACTTACACATCACCAGCCATTCTTTCTA 5772
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5773 GGTTGTAGAATGACACCAGTGTGGGTTGTGGGTTTTTGTTTTTTGTTTTGGGGGATATTTTCTGTCCATTTATG 5846
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5847 TCACTTTTACAATTAAAGAAACACGATAGATTCACTTATGTTATGAATCTATATTGTCTGAAACTTTTTTCTTA 5920
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5921 AAAAAATGATTTTCTTAGGCTTCTTCACTCTCTCTGACTTTACTAGCTCTAGTAATTGACGTACTTTTCATAAC 5994
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5995 AGTTTTAAGTAATCAAACAGTTATATCACTTCAGAAGTGAAAAACTCTTTGTCTTCAAAGACATCTCTTTGATA 6068
Query 1 -------------------------------------------------------------------------- 0
Sbjct 6069 ATAGACTTACCAGTTGCTGATCCTGAACAACTGGCTAGGCCTGTTCATTTGTTTTTTGTTTGTTTGTGAGATGG 6142
Query 1 -------------------------------------------------------------------------- 0
Sbjct 6143 AGTTGCTCAGGTTGGAGAGCAGTGGCACAATCTCGGCTCACTACCGCCTCCATCTACCAGGTTCAAGCAATTCT 6216
Query 1 -------------------------------------------------------------------------- 0
Sbjct 6217 CATGCCTCAGCCTCCCAAGTAGCAGGGATTACAGGCGCATGCCACCGTGCCTGGCTAATTTTTGTATTTTTAGC 6290
Query 1 ----ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCT 70
||||||||||.||||||.||.|||||||||||.|||||||||||.||||||.|||||||..|||||||||
Sbjct 6291 AGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACTTCAGGTAATCCGCCAGCCTCAGCCT 6364
Query 71 CC------------------------------------------------------------------------ 72
||
Sbjct 6365 CCCAAAGTGCTGGGATCACACCTGTTCATTTGTTAAGCAATTTGCTAAAAACTGACGAGGTTTATTCATTGCTA 6438
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6439 TACAGCAGTGTTTGATTCAGATAAATATCTTAATAGAGTCACATTTCTTCATGTCATGCCTTTAAGGTTGTTCC 6512
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6513 CAAATAGTCATAAAGAACAGAGGATACTCAGGTATGTAAGATCTTAGAGCCAAGAGAGAGTATGGAAATGGATG 6586
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6587 TTCAGCTGGTATTTACTGTCATAAGTGGGATTAGGAATTGTGGGTTTAGGGAATTAAAAACAACCAACAATTCT 6660
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6661 ACTTGGCTTTTAATCTCTTCAGTTATGAGTGAAGCATATTTGCTTGTAAGGGAAGAGATAAGGTAAAGGAAATG 6734
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6735 AAATAAAGAAAAAAAATTTGGTGGTTGGTATGGGGAATTCAAGAAAGATAAAATTTTGTAGAAATAAAAGGCTT 6808
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6809 GATGAGCTGGATTAGAAACCCAGCACAGTTGGAAAAATTGACAGTTTTCAATCACCAGGCATATCTTTAAAGTG 6882
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6883 AATAAACTGAGATTCAATTAGGACAGGGAAGGAAGTGAACAGGAGAGATAATGGTATAGCAAAAGGGAGTCCAA 6956
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6957 GGAGAAGAAGTCTCAGTGGGAGTTTTGGAAAACCAAGAGAGGCAGCAAGATACCGGAAAGAGCGTAGACGGTAC 7030
Query 73 -------------------------------------------------------------------------- 72
Sbjct 7031 AATGAACGGTAAGCAAAGCATAATTTCCCAAAATAGTCTTGATCAGTATTTCCTGTAAAATGTTTGATTTAAGC 7104
Query 73 -------------------------------------------------------------------------- 72
Sbjct 7105 ATTTTGTCCATCTCCATAGGCACATTTTATTGTCCTCTTTAAAATACAGAATGTACTTTTTAAAGATGGAAATA 7178
Query 73 -------------------------------------------------------------------------- 72
Sbjct 7179 CGTTTGAGGTCAGGCGTGGTGGCTCACGACTGTCATCCCAACACTTTGGGAGGCCCAGGAGGGCAGATTGCTTG 7252
Query 73 -------------------------------------------------------------- 72
Sbjct 7253 ATGAGCTCAGTAGTTTGAAACCAGCCTGGGCAATGTGGTGAAACCCTGTCTCTTAAGAAAAA 7314
