Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- XR_001755068.2
- Aligned Length:
- 5783
- Identities:
- 63
- Gaps:
- 5711
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAATTTGAAAACCAGCAGGACAAGCTCAGTATTGTTTAGTTTATGTTCTAGAGCACGGCTATAAAACACAAAGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATCTGTTCCCGAAATCGGGGTGTACTTAGTGAAACGCGTGGTTTTCCACATAGAAAACAAGGCGGTGCATTTTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTTCAGTTTCTTGCAAAGGAAAATGAAGTCACCGCAGTTTCAAATAATCACTAAATATAATACAGGCGTCATT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGATGAGATAAAATCCCCATTGTGCATGGTGGCTGCACATTTGATTGATGCCTTTTCTTTTACGTGTCCACTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTTTTCTGCAGCACACCTGCCTAGGCCAGCACCCACACCAGCGCCTCGTGTCTCTCTCTTCTTCTCACCCACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAACTATGCCCTGCAAGTCCAAAATACAAAATGCAAATGATCTTCAGCACATTTCCCCATAAAGAGAACCTTCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCAGGAGGAACAGCTCTGCGCACAGGCACTGTGGACACCGTGGCGGTGAAGTCATGTGCTTTTTGGTAGGAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGCTGTCATGGAAATGCAGTTACATCTGGGAACAGCATTACTGCTGCTAAAGTGATTAATAGCAAGGCTGGAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGACAGCCGCTTCGGCTCCTGGACGGACCGATAATCGACTTACCAAACGGTGCCCAGCCACAGTCGGTCTCATT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTCAGGGAGCTGGTGGGGGGCAGCGGACCCAGACTTCCTGTTCTGGCTGCTGAACCTGACGTCAGCTTCATCCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGCAGTGCAGTACTTGTGGAGCTCACCCTGGGACGTGATGGGAGGGCAGAAGCAGGGAGAGGAAGTGCCCTCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTGAGGCTCAGCATGGGGCACAGAGAGGAACAGTCACCCCTCCTCTCCCAGCAGCCTGCCCAGGGCACCTGCAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTGCATTCTAAGAGGGACACAAGGCGCTGCTGGCGGTGTGTCTGCAGGACCCACAAGAATGCCTGCTGGTGAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTTTCAGCAGGACTCTCCAGCAACCCCACTCCTGAGCACGTGACGAACATAAGCCATCTTCATATGCCACCAGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGACGAGCCTCGGGAGCAGTTTTAGTTCTAAGAGCTCCAAGCTGAAAGCCGACTGCCTGTCATCCTTGACCACC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGTCCACAAGGAAGAAGGGGTACATTTTCCTAGATTCACACAACTGAATGCTACACACCCGTGAAAAAGAACAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTTACAGGTCCAGGCAACAATGAGGATGAACCTCACAAACATAACATGAAGCAGAAGGAGGCAGACATGAAAGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTACAGACTGCAGCATTCCACTCATAGGAAGTCCAAGCATGGGCAACGAATCCATGCGGCTAGAGGCTACAAGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATTCTCCAAAGCATTATCTAAGTCCTGGAAGAGCAATTACAGTTTTGGTACCAAAAGTAGGAGCGACCAGCCAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCTCTCCCCCACAGACAACAGCACCTGCCCACGGCCAGCCTCCTGCGATGAGTCACAGGTGCCACGTGAAATGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATTATACACACTCAGGGACAGACACGCAAATGCTCCACTCATGAAGGATACAGAAATAGATGGAGGAGCTTCTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGTCATTGTTTACTTCTCAAAAATGGAATCATTCTATACATCCTTATGCACATGTTAACTTCTTACTCAAAGTA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCTCCTGGAAATGTTTCTGAGTCAACTGGTTTGCCTGTGATGAATTCTTTTAGGGACCTGCACATTTCATAATA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CGGACTTGTGATAATTTATTCAAACTTTTACCTACTTATTAGGTTCCCTTGATATCCAGCATTGTTTTTTTTTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTTTTTGCTTTTTTTGGTCACTACAAAGCTGCCATAAAGATGCTTATGAAGATATTCCTAAGTAAGGTGCTTTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ATTTTTAGGGTGAAATTCCCAGAAGTATGTCTGAAGGCTGTAGTGTTTTTTATTTCACTGGGTGTCACCAAAAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GCGCTAACGCTTGACATCCCATCAAGAACGCATGAAAACTCCTCTCCCCTCACGACCAGTGAATAGCGCTTACT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCCCTGGGCAATGCTGTGCCAGCCACTGAGCACAGTGTTGCCTTAATTTGCATATGGAATACCGGCAGACTCGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ACACCATTCACATATTTCCTGGCGATCTGAATTCCGTGTCTGTAAACTGCTTGTTCATCCCCCTTGCCCGTTGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTCTTTGGGTTTCCTAACTTCACACTCACTCCTACGATAAACATAATTTTCTTCTTGGATTTGTACTTTTTGTA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TTTTACATTCATGTCTTTAATCCATTTATTTTATTTTACTTTTTTGAGATGGAGTCTCACTCATGTCACCCAGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CTGGAGTGCGGTGGTGTGGTCTCGGCTCACTGCAACATTCGCCTCCCAGGTTCAAGCGATTCTCATGCGTCAGT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CTCCCAAGTAGCTGGGATTACAGGTGCCCGCCACCATGCCCAGCTCACTTTTGTACATTTAGTAGAGATGGTCA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGCTGGTCTCGAACTGCTGACCTCAGGTAATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCCACAGTGCCCGGGCCATTTGTTTTTATAAAATAGGGATTCAACATTTATTTCTTCCTGACGAATAACCAGTT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GTGCCGACACCATTTATTAAATTTATTAAATAAGCTCTGTCAAATATTCCATATTTTCTAATCTATTCTACTGA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CTTTTTTGTCTATTCTCATGTAATATCATAATTTGATTATGGTATTAAAATATGTTAATCTTTTGCATATTTTC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ATATCATAAAATGTTATCTTTACACTTTTCTTGATAATTCCTGGACATTCTTTCATACAAACTTTAAGATTATT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TTATTCAATTAAAAAAAACCCTGCTAAGATTTTCACTGGAGTTGCATTTTATTTAAATATTAACACTGGGAGAA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TTGGAACTTTCCAAATAACAAGTTTCCCACCCATAGTACATACTTCCAGCTTTTCAGACTTTGTTTTCTGTCTG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CCACTGAGGATTATTTTATTTCATTTTTTTTTAGATGGAGTTTCACTTTGTCGCCCAGGCTGGAGGGCAATGGT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GCGCTCTCGGCTCACTGCAAACTTCGCCTCCCGGATTCAAGCTATTCTCCTGCCTCAGCCTCCCCAGTAGCTGG 3108
Query 1 -------------------------------------------------------ATGGGGTTTCTCCATGTCG 19
||.|||||||.|.||||.|
Sbjct 3109 GATTACAGGCGCCTGTCACCATGCCTGGTTAATTTTTTTTGTATTTTTAGTATAGATAGGGTTTCACTATGTTG 3182
Query 20 GTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC--------------------- 72
|.|||..||||||.||||||||||||||||||||||||||||||||.||||||
Sbjct 3183 GCCAGTTTGGTCTTGAACTCCTGACCTCAGGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGC 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 GTGAGCCACTGCGCCTAGCCAGTTTTCTCCTTTTAAGTCCTGTGTGTCCAGAGAGGGGTGGGCACACTCACATT 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 CAAATCAATGCTGCCATCCCCCTGGCTCCAGGGACCCCTGCAGTTTAAGCTTCTCCGGGAAGCCTCTGCTTTCA 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 GGTTTCTTTTCTGGCCCAGTCCAGGTGAAAAGAGCTCGCACTAAGATCTCTGCTGGGAGTCAGACTCACCTGTC 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 TACCAGCTTGGGCAGACGCTTGCCTTGAGTCCTGAGGCTAGGCCACAGCTGGAGCAGCAGATAGAAGGGACAGG 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 GTTGCACTTATAACACCACTATCCTCCCAGCCCTGGTTTTATCATCATCATCGAGAAAAATACAATTAATCAGC 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 AGTGATCAAAGGTAAGTCTAAACATTCCATTTAACTAACTTAAATGTGACCTGGTGTGCCGTGTCATTCTATAA 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 ATGACATAACAGAATAAGACTCACTTTCTAATTCACAGCCTCTGGTTCAATTTCAAGTAAGCAAATACATTTTG 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 CTTTGGTTTTGCTTACAATATTCTGGGAAATGCAGGCTATAAATAATCACTCAACTGTTTTGTGGGTCAACAGA 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 ATCACTACTACTTTCAGTTTCGTTGATGCCATTTATATCATGAGCTCAAGCACACGGGCGCTTCAGAAGGCACT 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 ATAAAGTTTAGTTTTGATGTGGTGTGATGTTCTGATCTATCTTGAAAGGTAAAGAAACCCACAGGATTCAGCGT 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 CAAGCCAATCCATGCCCAGGCACATCGCAGCTGCTAGGTCAGGAAATCTGTGCGTTTAGGAGGCTCTGAGGGTG 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 ATGCTGGGACTGTACTCAGGTAATTAAACCCGGACAAACCCTGAGGCACAGAGAGGATGAGTAGGGGCCCTGGA 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 GGCAGCCTGACCCACAGGGAATTCTCGAGTGTGTGGCAGCCCTGCCTGGGGAACGAAGACCCGAGCCTCAATTT 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 CCTCACAGGGGCACTCGCAGGGTTGCTGTGAGGATCACAGGGGTAATGTATGTGGCAGTTTGTCATACCCCAGG 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 GCTCTGTAAGCGGCAGTTATTTATATTGTTACTTATGACACTGAACTAAGAGCTGACCCTGACGCCGCCTCCTC 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 AGAAGCCCTAAGTCTTGAGTGGCCTGGACACCACTACACACGAGAGTCAGGGGCGGGGGCTTTGAGATGGACCA 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 CCAGGAAAGCCGGGAGAGGGACCGGGACAGGGCTCCCACTTGCTCCTGGCTCACAGGGGCCCTCATAGTCATCA 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 GGTGGACCCCAACAGCTGTGGCCTGACAAAGATTCCCCCAAAGGCCAGCCCACCTTACACGCTACATCTGCCCC 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 AACAGCCCCCCAGCCCAACAGGTGGTGCCTTCATGGAGATGCCCATCCCTGCACGTAGCACTCAAGGCAGTTCT 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 CCCACCTGTAAAGCTGTTTTTCTTCCCCTACAATCCACACCCAACCTTTCTAGGTCAATCCTGAAACCCCACAC 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 AAGCTCCCCAACTACACCAGATCCTTCAACTCCAACACGCTCACCAAGTCTCTTCAATAGTCACTTCCATCTTT 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 ATAATTTACCATTTTCTTGAGCTGTTTGTATATTTCTCTAACCAGAAAGACAAGAAGTAGTAGTATTCAGATTT 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 ATAATGACTGGTTACTGGTACTGATTTGAGAGTTTCTTGTCAAGCGGATGAGTGTTTAAGGCCCACCACCTCTT 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 TTCATATTCTTCTCTCTTAAAAACCACATTTTCAAAGGTCTGCAAACGTTTTCCACAGTCAACAACTTGAGAGG 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 CATGGAAGTTTCTTGCTTATCAGGGGCCAAGGGGGAATTTTAGAATCTTTTGGGTAAATGAATGTTTAACATCC 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 CCTGAAAGCTGCTGGAGAGTGGGGAACCTAGGACCGTCACAAAACAGCCAGCCTCTGCATTGCCTCTGCCGACC 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 AGGGCTGCAGAGGGCAGCCACCCAGGGCTCAGCCACCGGCAGGAGTGGAGGAAGCACAGCTCCAAAGGTCACAG 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 AATTGCAGTCCTGGAGCTGGGTCCCTGCCAACTCCCGGAGAGTGAGCGAGGGGCCACTGGGCTGTGAATGCACT 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 GTCTCTGGCAGTGGATGATTTCCTCGTTCTTCTACGATAGAGACTCTAATGCCTCTCAGGCCCCTGATGGTCTA 5402
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5403 CAGGCCGGGTGACGTAATCCCAATGAGGGTAAGAAAATTATTCCTGCTTTTCTCCAGGTTATAACTGGTGATTA 5476
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5477 TGTAGGCTTGTCTGCTTTAATCTTCTTTTCTCAAAGTCTAGTAGAACACCTGCTTAACAACTTCCTGCCCACCC 5550
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5551 ATCACTCAGACAAAAATGCAGCGTTCCAAGAACAATGGAGAGCCACCTCCGCAGCCAGACCTAGGGTTGGATCG 5624
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5625 CACGAAGAGCTGGAATTTGGGGAACCACTTAAGACTGGATACATTTGGAAGGAACAGTCACACAAGATAAAATA 5698
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5699 AATATTTAGCTAAGCTTTCAAATTCTGGAAATGTCAACTAATAAAACTAAAAGTCTACTACCTCTGAAAGTATA 5772
Query 73 ----------- 72
Sbjct 5773 AATCCAAAAAA 5783
