Nucleotide Global Alignment

Description

Query:
TRCN0000492083
Subject:
XR_001755387.1
Aligned Length:
5086
Identities:
64
Gaps:
5014

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CAGGGTGTCCAGGAGTCTCTCTGCTGCCAGCCCCGCCCAGACTCCAGGCAGGTTCTCGTTGCTATGGTGATCGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGGTGCAAGCTGGATGCTTGGACGCGCCGCTGCCAGTCCAACGCAGACCCCGCCCACGACGTCGACGATTCGTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TAGCCCGCAGGTCCCGCGTGGCTCTCGTTGCCATGGTGATCGCCGCCGCTGGCTCAGGCGGACCAGGCCGCGCG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAGCCCCAGCTTTCACAGCCATCGCTGGACTGTGGAAGAATGAGGTCCTCCCTGACACCTTTGGGGCCCCCTGT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAGCCGCGACCGTGTCATCGCCAGCTTCCCTAAGTGGTACACGCCGGAAGCCTGTTTGCAGCTCAGGGAGCACT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCCACGGGCAGGTCAGCGCTGCCTGCCAACGCAGGAACACGGGGACTGTCGGGCTCAAACTCTCCAAGGTGGTG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTGGTTGGCGATCTCTACGTGGGGAAGACCAGCCTCATCCACAGGTTTTGCAAGAATGTTTTTGATCGAGACTA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CAAGGCCACCATTGGGGTGGACTTTGAAATTGAGCGCTTTGAGATTGCTGGGATTCCCTATAGCCTCCAGATTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ATCATCACGGCCTTTGACCTCACTGACGTGCAGACCCTGGAGCATACCAGGCAGTGGTTGGAGGATGCTCTGAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGAGAACGAGGCAGGCTCCTGCTTCATCTTCCTCGTGGGAACCAAGAAGGACCTTCTGTCAGGGGCCGCATGTG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGCAGGCCGAAGCAGACGCTGTGCACCTGGCCAGGGAGATGCAGGCCGAGTACTGGTCAGTGTCGGCCAAGACT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GGCGAGAACGTGAAGGCATTCTTCAGCCGCGTAGCCGCCCTGGCATTCGAGCAGTCGGTGCTGCAGGACCTGGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GAGGCAGAGCAGTGCCCGGCTCCAGGTCGGCAATGGAGACCTAATCCAAATGGAAGGGAGTCCGCCCGAGACCC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGGAGAGCAAGAGGCCCTCCAGCCTGGGCTGCTGCTAACTGGGGCCTGCGTGGAAGGCCTCCGCTCCCTGCACA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CACACGGACAGGAATTTCCGTGACTGTGGTGTGGAGACTGGAGCCCAAGCTCTGCAGCGTGTCGCCCTCAAGCT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GTAGGCCCATGTTCCAGTCCCTCCACCCACCCACCGGGCTCAGCTCCAGGGCACAGTCACTTGTCCGTTGCAGG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TTGGGCACTAGAAAAGGCCCCCACTGGCTGCCTGGGAGCCCCACACCACCGGGCCAGTGCAGGCACTGTGGTGA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TCCCATAAAAGGCCAGTCCATTTGCAGGGTCATCAGACAGTCACCTTTGGCCTCAAGAGGCCTCAGAACTGCAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ACTCCTGCGTCGGTCTATACTACTCGGCCATGGCCCACATCAGCAGTCAACCCTGCACTCTTTCCCAGCGATCT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TGGATGTGTCCCCAGGATCCGTCACAGTGTTCCAGGCAACCTGGACTTGTCAAAGTCAGCACCTGAAGGAGAGG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CCACCTGCCATTCCCCCTGGGAGTTTTCTGTTGTCAGCAGGACTTATGGTTCTGGGTCTCAGAGCTTCAGGCCT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CACTGTCCTTCTGCCACGGATGCTCAAGGTTCCTGGGCAGACCAGCACCTCTGGAGGACAATGGACAAAATGTC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TCTTAGACCTGTTCTGGCTGAAGGGCTATCTCTGGCACCTCTGAGATCCCTAGGTCCTGCCCTCCTGGTCCGTG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GGCCAGGATGTGCAGAACAACCACTCAGGCCTTTCTGGCCCACCTGGACAGTGCATTTACCTGTGTGCTGCGGG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  AGGCAGACTGCACAGCTGTCCTAGGGTAACTCACTCTGCAGCCCTTGAACATGGCACTGCCCTCCTCTGGCACT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CATGCTGGGCCTGTGCCCACTGCTGCCTCTCCATCCCTCTCTCATTGGCCTATACATCTCTTAGGACCTTTGTA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ATGGTGTCCATGCACCTTTAGAGGACTTCAGAGGCCCTGCCAAGTCTAGCATGTTCCTGTCTCCAACACCGCCT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CCTGCACATGCAGAGCAGACAGAAATACCCCACACATTCCCCAGCCTCTCTGCCCAGTATGCTCATCCACAGGG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TTTTCTCACTGCTATGAACCAGCCCCACAGCCCCAGGCCCCTGTCACCTGGCTATGCCCACTCATCCCACCCGT  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CTCGTGCTGTTGCTTCCCGTAGATGGCGAGCACCTTGCAGGCAGCCTTCTGATCAGTACTGCTCTCCTAGGGCC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TGGCACACTGCAGCTGCCCTGTAAATGTTCAGCTCAGCGATTGCCAAATACCAGTTAGGGAAGAACACTGGCAT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CTTTTTCTATTCATTCCCCCTTCAACATATTTTTTGTAGTTTTTTATATAAATGACTTTTTTTTTTTTTTGAGA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TGGAGTTTCACCCTTGTTGCCCAGGCTGGAGTGCAATGGCGTAATCTCGGCTCAGTGCAACCTCTGCCTCCCAG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GTTGAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCACCACCATGCCTGGCTAATT  2516

Query    1  -----------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCG  57
                             |||||||||||||||||.||||||||||.|||.|.||||||||.|||||||||.|.|
Sbjct 2517  TTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGCTCTCGGACTCCTGATCTCAGGTGACCTG  2590

Query   58  CCCACCTCAGCCTCC-----------------------------------------------------------  72
            ||||||||.||||||                                                           
Sbjct 2591  CCCACCTCGGCCTCCCGAAGTGCTGGGATTACAAGGGTGAGCCACCATGCCCGGCCATAAATGATTTTATTCAT  2664

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2665  TTTTATGTTTTCTTTTGGGCGGCGGGATGGAGTCTCTGTCACCCAGGCTGGCGTGCAATGGCACGATCTTGGCT  2738

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2739  CACTGCAAGCTTCCCCTTCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCAC  2812

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2813  GTGTGACCATGCCGGGCTAATTTTTTATATTTTTAGTAGAGAGAGGTTTCACCGTGTTAGCCAGGATGGTCTCG  2886

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2887  ATGATCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCCTGAGCCACCGCGTCCG  2960

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2961  GCCTCCATAAATGACTTTTAAAGGGGTTGTATGTTTAGTGTGAACAAAGACAGTACAAAGCATATAAAATACAA  3034

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3035  GGTGAAAGCCCCCCCCCCGCCACATTAGCTGCGCCCCTGAAGTGTCTCCAGCAGAAGAGATGGATGAATGGAAG  3108

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3109  GACACACAGATGGACAGAGAGCAGGAAAGACTGTTAGCTCTGCTAACAGTCAGGACTATTCCTTCTGGACTCTG  3182

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3183  TGCCTTTGCCTGCACAGCTAGTGTTGATGGCTTGTTTGTTGTTTTCACCAGAGTGAGCTCCTTCTGGACATACT  3256

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3257  GCCTGGCAGCCTGCCTTCCTAGGGAGCTGGCGCCAAGGCCTCTCCCTGATGGCACACAAGGAGCCTCCTTCCTG  3330

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3331  TAGCAGCGCCCAGTTTTCATGTGGATGGATTGTAGTTCATTTGACCCTCCCCATCCGCGGGCCATCCGGCTTGT  3404

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3405  GTCCAGCTTTTAGCTCTTGCCAATGGTGCTGCAGTGGCCATTCTTGTAGTTATAGCTTTGCGTACTCAGGAAGG  3478

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3479  CCCTTCTCCCGACTGCGGCCCCCAGCCTGGTCCACTAAATGCAGCCTGTGGTCGGGCAGACAGCATTGGGGTCC  3552

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3553  ATTAGGAAGACCAGGTTTGCTGGGCATAAGCTTCACAGGACGGGAGAACCTGCCCATGGTGGACTGTCGTTCTC  3626

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3627  CACAGCTCCCTTCCCTTGCCCCTTCGGGCCTCCAGGATATGTTTGCGGGGGTGGGTGTGGTGTCCAGCTGTTAC  3700

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3701  CAGCTTCTGAGCTAGAGCTGTACTGCCTCACGTACACCCCCACCTCTGTAAATGGTCCTTGATTAAATCGTCCT  3774

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3775  CATATTACCTCCTGCAATGTGCCAGCTGATTCCCACACACCCTGACTGACATAGTTGTGGCCTCTCGAACTTTG  3848

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3849  ATATTTGGCCTGGGAGGACAGAAGAGTAAGGTCGCCACGGAAACGCAAGGGGCTCAGTTGTCCCCCCACCCCAA  3922

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3923  GTTGATGCAGCATCTTCTCGGTCAGAATTGCTTCAGGGTGGTTTGCGCACCCTCACTTTGATGATTTAATGAAG  3996

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3997  ACATTTCCTTCTTTCCCAGCATCGGGCAGTAAGTTTCCTGGGCAGAGGCACTTTCTGTTGGTCTGGTCTTGTGG  4070

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4071  GCCCAGGCAAGCAGCCCCCTGCAGCCAAGGTGCGGCAATGACCACAGTGACCGCGTCCAAGTGCTGCCGAAACG  4144

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4145  CCTTTTTCCTCTTCCCTGTTTCCCTGGACCCTTTCCTGCTCTCTGTCCATCTGTGTGTCCTTCCGTTCACCTGT  4218

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4219  CTCTTCTGCTGGAGACACGTACCTGAAGCAGGTCCTCTCCTGTCACTTCCTGGCTCCCCAGGGCTAGGTCCCAG  4292

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4293  GGTGCTCTCGCTCTGGCTTTCGAGGCTCCTCACCACCCAGCCCACCCCACCCCCACAGGCCCCTGTGCTCCAGT  4366

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4367  TTCATCCCTGGTCACAATGCAGTCTGCAGATGCCAGACCCCTCTTCTGTGCCCAACGGCTGGGACACCCCTACT  4440

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4441  CCCAGAGAGGCCTCTGTGGACACCCCCACAGCTCTCGCAGCACTTGATACCTTGAGTGTGATTGGTCACATCTG  4514

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4515  GGCTTTCTCCCCCACCCATCTGTGGAACCCCAAGAGCCAGGACAGTGACCTCATCACCTCTACTGTCTCCCCTA  4588

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4589  GCACCTCTGGGAGGAAGGGCCCACAGTAGGTGCTCAATAGATGTGTAAAGAAGGCAGGGAAGCAAGAAGGTTGC  4662

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4663  TCAAACAAGACCATGTTCCCAGCAGACAGATTGCACTCTGACCCAGATGCCACCACACGAAACTTACACCTGCC  4736

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4737  TGGGGAACAATCCTGTGCTTGGCTCTCCTTGGTGGCCAGGGACAGTTGTGCCTCATCCCTCACTTGCAAACCCC  4810

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4811  AGTCCTGTCTGACCCAGAGACCCTCACAGGGCATCAGCCAGTGAAGGCGGTTTGGGGCTGGAGGATATGTTCTG  4884

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4885  ATCTTGGGAAGAGCTTGGTAGGAGCCAGCCACAGAAAGTTTCAGGGCAGAACTGAACAGGTCTCGGGAAGGACA  4958

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4959  CTTCATGCCAGCTAGAGAGGCTCTGGGCACAGGAAAGAATTGGACTTCGGGCAGAAAAATGTTTGTGCTATTTA  5032

Query   73  ------------------------------------------------------  72
                                                                  
Sbjct 5033  GTACTATGTAACAAATCACTCCAAAACTTCATTGCTTAAAGCAACAAGCATGTA  5086

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