Nucleotide Global Alignment

Description

Query:
TRCN0000492083
Subject:
XR_002957208.1
Aligned Length:
5259
Identities:
65
Gaps:
5187

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGCTGAGAGGGCCCGCGGGTAGGCATGGCGGCGCACCTTAAGAAGCGGGTTTATGAGGAATTCACGAAAGTGGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCAGCCACAGGAGGAAATTGCTACTAAGAAACTCCGACTAACAAAACCAAGTAAATCTGCAGCACTCCACATAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ATCTGTGTAAAGCTACCTCCCCAGCAGATGCTTTGCAATACTTGCTCCAGTTTGCCAGGAAGCCTGTCGAGGCG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAAAGCGTAGAGGGAGTAGTCAGGATTCTCTTGGAACATTATTACAAGGAGAATGATCCATCTGTGAGACTGAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AATTGCATCATTGTTGGGTTTATTATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGATGATGCCATCA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ACATCCTGCAGAATGAAAAGTCTCATCAAGTCCTAGCTCAACTGCTGGATACTTTGCTTGCAATTGGCACTAAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTACCAGAGAATCAAGCTATCCAAATGCGATTAGTTGATGTGGCCTGCAAGCATCTGACAGATACGTCTCATGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TGTAAGAAATAAGTGCCTGCAGTTACTTGGCAATCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATGCAGAAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GCCTAGCTGCCAGAGATGTCCAGAAGATTATAGGGGATTACTTCAGTGACCAAGACCCACGTGTCAGAACAGCA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCTATAAAAGCCATGTTGCAGCTCCATGAAAGAGGACTGAAATTACACCAAACAATTTATAATCAGGCCTGTAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ATTACTCTCTGATGACTATGAACAAGTGCGCAGTGCTGCAGTCCAGCTTATCTGGGTCGTCAGTCAGCTCTATC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTGAAAGCATTGTCCCAATTCCTTCTTCTAATGAAGAAATACGCTTAGTTGATGATGCGTTTGGCAAAATTTGT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CACATGGTCAGTGATGGCTCTTGGGTGGTTCGTGTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TTCTCATTTCTTGGAGCAGACCCTTGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GTGCCAAGGAACTTTACAGTTCGGGGGAGTTTTCCAGTGGCAGAAAGTGGGGAGATGATGCTCCCAAGGAAGAA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GTAGATACCGGGGCTGTGAACTTGATTGAGTCAGGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGAT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTATGAGGTTCGTATTGCTGCTGTGGAGGCCCTCTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GCCTTGATTTCCTAGTTGACATGTTCAACGATGAAATTGAGGAAGTACGTCTGCAGTCTATACATACCATGAGA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AAAATCTCTAACAACATCACCCTCCGAGAAGATCAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCATCCAG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGATATTCGAGAGGCTCTTCATGAACTCTTATGCTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCAT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TGGTGGAGCTGCTGAAAAATTTAACCAAGTACCCTACTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTCTG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GGAAGTCGGCATCCAACCCTGGTGCTTCCCTTGGTGCCAGAGCTTCTGAGCACCCACCCATTTTTTGACACAGC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TGAACCAGACATGGATGATCCAGCTTATATTGCAGTTTTGGTACTTATTTTCAATGCTGCTAAAACCTGTCCAA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CAATGCCAGCATTGTTCTCAGATCACACCTTCAGGCACTATGCCTACCTCCGAGACAGTCTTTCTCATCTTGTT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CCTGCCTTGAGGTTACCAGGTAGAAAACTGGTGTCATCAGCTGTTTCTCCCAGCATCATACCTCAAGAGGATCC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TTCCCAGCAGTTCCTGCAGCAGAGCCTTGAAAGAGTGTATAGTCTTCAGCACTTGGACCCTCAGGGAGCCCAGG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AGCTGCTGGAATTCACCATCAGGGATCTGCAAAGACTTGGAGAACTTCAATCTGAATTGGCAGGAGTAGCTGAT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TTCTCTGCCACCTATCTTCGCTGTCAACTACTTCTCATCAAGGCCTTGCAGGAAAAGTTGTGGAATGTAGCTGC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CCCTTTGTATTTGAAGCAGAGTGATTTGGCCTCAGCAGCAGCGAAACAGATTATGGAAGAGACCTACAAAATGG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AATTCATGTACAGTGGTGTGGAGAATAAGCAGGTGGTGATTATACATCACATGAGGCTGCAGGCCAAAGCTTTG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CAACTTATAGTAACAGCACGAACTACACGAGGGACAGCTTTGTGGACAAACTCCTTGACCTTATGCCCCGACTC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  ATGACATCCAAACCTGCAGAAGTGGTCAAAATTCTACAGACCATGCTGCGACAGAGTGCCTTTCTGCATCTCCC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GCTTCCAGAGCAGATCCACAAAGCCTCAGCCACCATCATCGAGCCAGCGGGCGAGTCAGACAACCCTTTGCGGT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  TTACCTCTGGGTTGGTGGTTGCCCTGGATGTTGATGCAACCCTGGAGCATGTGCAGGATCCTCAGAACACTGTT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  AAGGTCCAGGTCTTATATCCAGATGGCCAGGCTCAGATGATTCACCCCAAGCCTGCAGACTTCCGGAATCCTGG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CCCAGGGCGGCACCGGCTCATCACTCAGGTTTATCTCTCCCACACCGCTTGGACAGGATGTGCCATGAAGCTGT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  AGCCAGGTGGAATTGTACCACAGCCCTGACATGAACACCTGATGGCAGCTGCTGGGTTGGAGCCTAGACAAAAA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CATGAAGAACCATGGCTGCTGCCTGAGCCCATCGTGCTGTAATTATAGAAAACCTTCTAAGGGAAGAATATGCT  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  GATATTTTTCAGATAAGTACCCCTTTTATAAAAATCCTCCAAGTTAGCCCTCATTTTCCATGTAAGGAAACAGA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GGCTTTGAGATAATGTCTGTCTCCTAAGGGACAAAGCCAGGACTTGATCCTGTCTTAAAAATGCAAAATGTAGT  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  ACTTCTTCCATCAAAGGTAGACATGCACTAAGGGACAGGTTTTGGCTTGGTATCAGAATACATTTTTAAAAGCT  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  GTGTAAGAATTGAACGGGCTGTACTAGGGGGTATAGAATTCTCCAGGCTAGATGAGTTTGGGCAGAGGTTGAAC  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  AAGCTCCTGACAAATTTGTTGCTAAGCAATTCAAGTATCGTATCGGGGTTGGGCTCAACTTTTTAAATTGCTTT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TACCCTGAATTTTCACGTTCTGGGGAACATGAGAATTTTAGTTTTTCTCTATCTGATTCTGTACTTTTTCACTG  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  AAGTGAAAAAAAAAAAAAGACCTTTTTATAAAGGTTTCGAAGGGGGCATAAAGAGCACTCCAGTGTGGCACCTT  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  CATTTACAAATGAATACGCAGGCCCAGAGAGACTGAGTTAGTGGTGAAGCTAAGCCTGGAACCCAGGCCTCTGG  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  TTTCTTCCCCAGGTGACTTTCATCACAGGGGTCTGTTCTTAGTGAGTGGTCTAGCATGCACCCAGCAGTCAGAG  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  CCAGAAACCTGTTTGGCACGTTGGATTCCTTCCTCATCCCTCATACAAAAGTAGCCATCAAGTCCTTTAGATTC  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  CTCTTCCTTCATGTTTCTTAGTCCTCTTCTTATACTGTTTGTATACTGATGGAACCACCATCAGCCCTCCTTAA  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  GTGATGAGCTGATCTGACCACACCATTCCCCTGCTCAGTCCCTTTCAGTGGATCACTGCTCATCCCAGGAAAAA  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  GTCTGAACTCCTGTCTTGAAGGCTCTTCATGGCTCTGCTTCGTTTCCAGCCTCATACTCCCTGTCCCAAACTGT  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  CTCTGTACTCCACTTGAACAGAATTACCTGTAGTCTTTTTCTGTCACCTCTAGGCCTTTGGACCTGCTGAGCCT  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  GGGAATGTGCTCCTCAGACTGTCTCCTGTGGTTCTTTCCTTCCATTCTTCAGGACTGGGCCTTGTTCTAGGACA  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  TATCTGTGTCTCTTATGGGCTTGGAACATTTCCTCTATGTTCCCACAGCCTCCTATACTATATTCTTCACACAT  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  AGTATAGTATTTATTAATATGGCATTGCAGGTTCACAAATGCAAACCCCTTAAGAAAGGTAGGCAGGAAAAGTA  4070

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4071  AAGGAATAAAGTGGCCTAGAAGATAACAGCAATTGGAAGAATCAGAGAGCACATTCTCTGTTGGAGAAGGCGGT  4144

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4145  GCTATTCCATTCCACTCAGTTATTTTCATTTATAAGTGTGGACCTAGTGGTGTCAGTTCTTCCCATTCTTCCAA  4218

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4219  AACAGCCAGAAATCTTCATTTTCATGAAAGTTAAAAAACCTTGGTAACTACAGTAAATATTAAAATTACTGAGA  4292

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4293  CAAACAAAACATGTCTCCAGGCAGATTTGTGCCAATTTGCAACTTCTACATCCTCACTGTAATGTTTACACGCC  4366

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4367  TTATTTCTTCCAACTGATCTGTACCTGGACTGTAAGAATGTCTGTGCTGTATGCCCAGCACAACTCCTGGCACA  4440

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4441  TAACCGGGCAAGGAAAGAATGATTCTATGTCTCCAGAGCAAAGGTAGCAGTACCATGGCATGCTGCAAAAAAAG  4514

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4515  ATTCAGGTTTCTGAAAGGACTTTATATTTGCTTTGAGATGATTGAACTCAGCAAACACAATCATGGAGAAGAAA  4588

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4589  GGTACACACCTAGCTGTGGCCAGCTTCATGTCTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCACCCAG  4662

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4663  GCTGGAGTGCAGTGGCACGATCTCACCTCACAGCAGGCTCTGCCGCCCTGGTTCCAGCGATTCTCCTGCCTCAG  4736

Query    1  -------------------------------------------------------------------------A  1
                                                                                     |
Sbjct 4737  CCTCCCAAGTAGACTAGCTGGGATTACAGGCACGTGCCACCACGCCTGGCTAATTTTTGTATTTTTAGTAGAGA  4810

Query    2  TGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC---  72
            |||||||||.||||||.||.|||||||||||.|||||.||||||||||||||||.|||||||||.||||||   
Sbjct 4811  TGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTGCTGACCTCAGGTGATCTGCCCACCTCGGCCTCCCAA  4884

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4885  AGCGCTGGGATTACAGGCGTGAGCCACCGCACCCGGCCAACTTCTTGTCTTAACCACTCAGGCTAGAAGAAATG  4958

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4959  ACCTGTGGGCAGCTTGAGGGCTGTTCTACCTACAAACTAACTCAGAGGCTTTAATGATTTAAGACAGAGGACTA  5032

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5033  AGTATAGTTATGTGGAGAAACAGCTTCCCTTCAAGCTCTACATATTTCCATCGTTAACCATGTGCACCAGGTTC  5106

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5107  CAAAGTAGGGGCTATGTATTAGCAGGTTTTCTTAAAAGTTTAATAATGTCACTGACAGATACTTCTGTCTCTAA  5180

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5181  GAAGTTTACACTAAGTTCTCTTTAATTGGAGACAACTCACTTAGGAAGAATGATTACACCCACACTGAATTCAA  5254

Query   73  -----  72
                 
Sbjct 5255  CACCC  5259

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