Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- XR_002958353.1
- Aligned Length:
- 5348
- Identities:
- 64
- Gaps:
- 5276
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTATATTGAAACATTACAACCATCTTTTGATGGCAACACCCTGAGGACCTCCCTTTTCCAGATGGGGAAACTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGCCCAGAATTGCTAAGTGGCTTGCTTGAGTTGACACAGGGAGCTCCAGGACTCACCCTCAGCTGAGCCACCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCGGGAGCATGCCTCTGCGCCACTGGGGGATGGCCAGGGGCAGTAAGCCCGTTGGGGATGGAGCCCAGCCCAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCTGCCATGGGAGGCCTGAAGGTGCTTCTGCACTGGGCTGGTCCAGGCGGCGGGGAGCCCTGGGTCACTTTCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTGAGTCATCGCTGACAGCTGAGGAAGTCTGCATCCACATTGCACATAAAGTTGGTATCACTCCTCCTTGCTTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AATCTCTTTGCCCTCTTCGATGCTCAGGCCCAAGTCTGGTTGCCCCCAAACCACATCCTAGAGATCCCCAGAGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGCAAGCCTGATGCTATATTTCCGCATAAGGTTTTATTTCCGGAACTGGCATGGCATGAATCCTCGGGAACCGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTGTGTACCGTTGTGGGCCCCCAGGAACCGAGGCATCCTCAGATCAGACAGCACAGGGGATGCAACTCCTGGAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCAGCCTCATTTGAGTACCTCTTTGAGCAGGGCAAGCATGAGTTTGTGAATGACGTGGCATCACTGTGGGAGCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTCGACCGAGGAGGAGATCCACCACTTTAAGAATGAGAGCCTGGGCATGGCCTTTCTGCACCTCTGTCACCTCG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTCTCCGCCATGGCATCCCCCTGGAGGAGGTGGCCAAGAAGACCAGCTTCAAGGACTGCATCCCGCGCTCCTTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGCCGGCATATCCGGCAGCACAGCGCCCTGACCCGGCTGCGCCTTCGGAACGTCTTCCGCAGGTTCCTGCGGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTTCCAGCCGGGCCGACTCTCCCAGCAGATGGTCATGGTCAAATACCTAGCCACACTCGAGCGGCTGGCACCCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCTTCGGCACAGAGCGTGTGCCCGTGTGCCACCTGAGGCTGCTGGCCCAGGCCGAGGGGGAGCCCTGCTACATC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CGGGACAGTGGGGTGGCCCCTACAGACCCTGGCCCTGAGTCTGCTGCTGGGCCCCCAACCCACGAGGTGCTGGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACAGGCACTGGTGGCATCCAGTGGTGGCCAGTAGAGGAGGAGGTGAACAAGGAGGAGGGTTCTAGTGGCAGCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTGGCAGGAACCCCCAAGCCAGCCTGTTTGGGAAGAAGGCCAAGGCTCACAAGGCAGTCGGCCAGCCGGCAGAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGGCCGCGGGAGCCACTGTGGGCCTACTTCTGTGACTTCCGGGACATCACCCACGTGGTGCTGAAAGAGCACTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGTCAGCATCCACCGGCAGGACAACAAGTGCCTGGAGCTGAGCTTGCCTTCCCGGGCTGCGGCGCTGTCCTTCG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGTCGCTGGTGGACGGCTATTTCCGCCTGACGGCCGACTCCAGCCACTACCTGTGCCACGAGGTGGCTCCCCCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CGGCTGGTGATGAGCATCCGGGATGGGATCCACGGACCCCTGCTGGAGCCATTTGTGCAGGCCAAGCTGCGGCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CGAGGACGGCCTGTACCTCATTCACTGGAGCACCAGCCACCCCTACCGCCTGATCCTCACAGTGGCCCAGCGTA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCCAGGCACCAGACGGCATGCAGAGCTTGCGGCTCCGAAAGTTCCCCATTGAGCAGCAGGACGGGGCCTTCGTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTGGAGGGCTGGGGCCGGTCCTTCCCCAGCGTTCGGGAACTTGGGGCTGCCTTGCAGGGCTGCTTGCTGAGGGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CGGGGATGACTGCTTCTCTCTGCGTCGCTGTTGCCTGCCCCAACCAGGAGAAACCTCCAATCTCATCATCATGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGGGGGCTCGGGCCAGCCCCAGGACACTCAACCTCAGCCAGCTCAGCTTCCACCGGGTTGACCAGAAGGAGATC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACCCAGGGACCGTGGGCAGGAGCTACGAGTGGTGCTCAAAGTGCTGGACCCTAGTCACCATGACATCGCCCTGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCTTCTACGAGACAGCCAGCCTCATGAGCCAGGTCTCCCACACGCACCTGGCCTTCGTGCATGGCGTCTGTGTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CGCGGCCCTGAAAATATCATGGTGACAGAGTACGTGGAGCACGGACCCCTGGATGTGTGGCTGCGGAGGGAGCG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GGGCCATGTGCCCATGGCTTGGAAGATGGTGGTGGCCCAGCAGCTGGCCAGCGCCCTCAGCTACCTGGAGAACA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGAACCTGGTTCATGGTAATGTGTGTGGCCGGAACATCCTGCTGGCCCGGCTGGGGTTGGCAGAGGGCACCAGC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCCTTCATCAAGCTGAGTGATCCTGGCGTGGGCCTGGGCGCCCTCTCCAGGGAGGAGCGGGTGGAGAGGATCCC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CTGGCTGGCCCCCGAATGCCTACCAGGTGGGGCCAACAGCCTAAGCACCGCCATGGACAAGTGGGGGTTTGGCG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCACCCTCCTGGAGATCTGCTTTGACGGAGAGGCCCCTCTGCAGAGCCGCAGTCCCTCCGAGGTATGTCTAGGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GACCCTTGGGCCCTCCCCGCAGTGGGGGCCCCTCCAAGAAATCCAGAGGACAGAATCAGAGCTCAAAGCTGCAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCCTTCTGGCCTCGTGACTTCAAGTCTCTCTGGGCTACCAGCAGGTGGGCCACTCGCTGGGGCTCAATGTAGTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CCAGCCTTTTTAGGTCCTTGTGGAAGTCACTTGTGCCTGGCACACAGAAGGCAAGTAAGAGACTTGATTTCAGT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTTAGGCAGAGTGACCAGGGCAGCGATGGGAGACGCCCAGGCTGCAGAGTGGGGAAGAAGGGCTGAGGATGCGC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTCACCCAGCAGTGGGGTCAGACAAGGCTTCCCAAAGGAGGTTCATGAGTGTGGTGGTTTTATTTTGAGACGAA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GTTCCACTCTAATTGCCCAGGCTGGAATGCAATGGCGTGATCTCAGCTCACTGCAACCTCTGCCTCCTGGGTTC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AAGCGATTCTCCTGTCTCAGCCTCCCGAGTAGGGGGGATTACAGGCACATGCCACCACACCCGGCTAATTTTTG 3034
Query 1 --------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCC 60
||||||||||...||.|.||||||||||||||..||||||||||||||||||||||||||
Sbjct 3035 TATTTTTTGTAGAGATGGGGTTTCATTATATTGGTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCGCCC 3108
Query 61 ACCTCAGCCTCC-------------------------------------------------------------- 72
|||||.||||||
Sbjct 3109 ACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACAGTGCCCGGCCCCAGAAGAGGTTTTATCTAAG 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 TGTAGAATTATGCCAACAAGCCTGGCTAGGAAGGGCAGCCTAGGCAGAGTGCATGGCCTGTGCAAAGGCTGAGG 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 CTTCAGTGTATTAAGGAGCTGTGGTCTACAGGAGGGGCAGGAGGGAAGCTTGGGGCAGGAGGCTGACTGTGACA 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 CTCCAGCTCTGCATAATCACTGGACCTGGGTCCCAGTCCTGGTTCTACGGCTGTGAGCACGTCCTCCCACTTTG 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 TGGAGCCTCAGTTGCCTCATCTGTATAATGGAACTGATAAGAGCGGGCACCTGGCGGTCCACTCTGGGGACTTG 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 ACTCTGCCTCTTGGGGAACGGGTTGGGGGCGAGGGGAGGATGTTGACTCCTCTGGGTCCCTTTCCCAACAGAAG 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 GAGCATTTCTACCAGAGGCAGCACCGGCTGCCCGAGCCCTCCTGCCCACAGCTGGCCACACTCACCAGCCAGTG 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 TCTGACCTATGAGCCAACCCAGAGGCCATCATTCCGCACCATCCTGCGTGACCTCACCCGGCTGCAGCCCCACA 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 ATCTTGCTGACGTCTTGACTGTGAACCCGGACTCACCGGCGTCGGACCCTACGGTTTTCCACAAGCGCTATTTG 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 AAAAAGATCCGAGATCTGGGCGAGGGTCACTTCGGCAAGGTCAGCTTGTACTGCTACGATCCGACCAACGACGG 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 CACTGGCGAGATGGTGGCGGTGAAAGCCCTCAAGGCAGACTGCGGCCCCCAGCACCGCTCGGGCTGGAAGCAGG 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 AGATTGACATTCTGCGCACGCTCTACCACGAGCACATCATCAAGTACAAGGGCTGCTGCGAGGACCAAGGTGGG 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 CGGGACCCGGCGAGTCCTAGAGACTTGAGGGGGCGTGGTTAGAGCGTGGGTGTGGCCTTGTGGGCGGGGCCAGT 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 CTGGCCTAGCCAATTAGAGACTCTCAACCCCAGGCTGCAGTACGCGGTTCTTGGCATCTGGGTGAGCGTGGCTG 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 GGCTGCCTCCTTCCCATCTGGGGGGTGCTACCTGCTGGGGCCAGGATGGACGGGAGCCACCAGCAGCTCCCTCA 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 AGTGAGAATGGGGTTCTGGATGGGTCCATCCCACCTGAGAACTGGGTCTAGTGTGCGCGGGTCTTGGCCTTCCC 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 TCCCGACCTTGGAGGGGCTCTGCTGGGCTCAAGGTAGGCGGTCCCCGGCCCGCCCTCTATCGTCCCCCACCGGG 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 GCCGCCCCTCTCCGCGGCAGGCGAGAAGTCGCTGCAGCTGGTCATGGAGTACGTGCCCCTGGGCAGCCTCCGAG 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 ACTACCTGCCCCGGCACAGCATCGGGCTGGCCCAGCTGCTGCTCTTCGCCCAGCAGATCTGCGAGGGCATGGCC 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 TATCTGCACGCGCAGCACTACATCCACCGAGACCTAGCCGCGCGCAACGTGCTGCTGGACAACGACAGGCTGGT 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 CAAGATCGGGGACTTTGGCCTAGCCAAGGCCGTGCCCGAAGGCCACGAGTACTACCGCGTGCGCGAGGATGGGG 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 ACAGCCCCGTGTTCTGGTATGCCCCAGAGTGCCTGAAGGAGTATAAGTTCTACTATGCGTCAGATGTCTGGTCC 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 TTCGGGGTGACCCTGTATGAGCTGCTGACGCACTGTGACTCCAGCCAGAGCCCCCCCACGAAATTCCTTGAGCT 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 CATAGGCATTGCTCAGGGTCAGATGACAGTTCTGAGACTCACTGAGTTGCTGGAACGAGGGGAGAGGCTGCCAC 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 GGCCCGACAAATGTCCCTGTGAGGTCTATCATCTCATGAAGAACTGCTGGGAGACAGAGGCGTCCTTTCGCCCA 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 ACCTTCGAGAACCTCATACCCATTCTGAAGACAGTCCATGAGAAGTACCAAGGCCAGGCCCCTTCAGTGTTCAG 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 CGTGTGCTGAGGCACAATGGCAGCCCTGCCTGGGAGGACTGGACCAGGCAGTGGCTGCAGAGGGAGCCTCCTGC 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 TCCCTGCTCCAGGATGAAACCAAGAGGGGGATGTCAGCCTCACCCACACCGTGTGCCTTACTCCTGTCTAGAGA 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 CCCCACCTCTGTGAACTTATTTTTCTTTCTTGGCCGTGAGCCTAACCATGATCTTGAGGGACCCAACATTTGTA 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 GGGGCACTAATCCAGCCCTTAAATCCCCCAGCTTCCAAACTTGAGGCCCACCATCTCCACCATCTGGTAATAAA 5328
Query 73 -------------------- 72
Sbjct 5329 CTCATGTTTTCTCTGCTGGA 5348
