Nucleotide Global Alignment

Description

Query:
TRCN0000492083
Subject:
XR_002958640.1
Aligned Length:
5167
Identities:
63
Gaps:
5095

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TACACAAGTGCCTTTCAACAAGTTACATACAAAATCAACCTGTGACATCAGGTAGATATTAAAAACTGATCAGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAAAAGCCTCTGCAGCAACTGAACTCCACACTTATGTGAGGCGGGAGGCTGAGTGGGCCCTGTGAAGACGCGGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGTCACGGCTGCTAAAGCGTCCATGCAACACACAGAACAGCAACAAAAATAAACAGCAGATGCCATCGCGGGTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAGGGTGGGGGTGGGAGAAGAAAGGTGCCAATCTTCTGGAAGAACACAGAAAACCGCCAGGAGTCACAGCGCGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CGAGTGTGCGGGGAAGGCGGCGGGGCCGGGAGTCACAGCGCGACGAGTGTGCGGGGAAGGCGGTGGGGCTGGGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCTGGCAATGTCTTCTGTCTACAGACTCCCTCGCCACATCCAGCCCTCCCCACCCCTCCCACTGGCAGCGAGAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GAAATCCCGTCCGGGGAGCAGCAGGCAGCTGCGGTGGGAATTTCATGACACTAGAAAAGACTGGACTCCTCCCT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CATCCTACACCTGCAGAGCCCCACGCAGTCATTTAGGCACAAACATTCACTGTATTCGCCTGCATTCCATGAAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GCTCCGTTCTTTCCATGCTGAATTTGAGCCACTTCGCAGACAGAAGTGGCCCTGGGTTCTCAGCCCCACCTAAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTGCCTAAGACTACAGCCACGCGACACATTCTCTGCAGCAGGCTACAAGAATTCTCCAAAGCATTATCTAAGTC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CTGGAAGAGCAATTACAGTTTTGGTACCAAAAGTAGGAGCGACCAGCCAGGCTCTCCCCCACAGACAACAGCAC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTGCCCACGGCCAGCCTCCTGCGATGAGTCACAGGTGCCACGTGAAATGCATTATACACACTCAGGGACAGACA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CGCAAATGCTCCACTCATGAAGGATACAGAAATAGATGGAGGAGCTTCTTGGTCATTGTTTACTTCTCAAAAAT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGAATCATTCTATACATCCTTATGCACATGTTAACTTCTTACTCAAAGTACCTCCTGGAAATGTTTCTGAGTCA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ACTGGTTTGCCTGTGATGAATTCTTTTAGGGACCTGCACATTTCATAATACGGACTTGTGATAATTTATTCAAA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CTTTTACCTACTTATTAGGTTCCCTTGATATCCAGCATTGTTTTTTTTTCCTTTTTGCTTTTTTTGGTCACTAC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AAAGCTGCCATAAAGATGCTTATGAAGATATTCCTAAGTAAGGTGCTTTTATTTTTAGGGTGAAATTCCCAGAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GTATGTCTGAAGGCTGTAGTGTTTTTTATTTCACTGGGTGTCACCAAAAGGCGCTAACGCTTGACATCCCATCA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AGAACGCATGAAAACTCCTCTCCCCTCACGACCAGTGAATAGCGCTTACTGCCCTGGGCAATGCTGTGCCAGCC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ACTGAGCACAGTGTTGCCTTAATTTGCATATGGAATACCGGCAGACTCGAACACCATTCACATATTTCCTGGCG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  ATCTGAATTCCGTGTCTGTAAACTGCTTGTTCATCCCCCTTGCCCGTTGTTTCTTTGGGTTTCCTAACTTCACA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CTCACTCCTACGATAAACATAATTTTCTTCTTGGATTTGTACTTTTTGTATTTTACATTCATGTCTTTAATCCA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TTTATTTTATTTTACTTTTTTGAGATGGAGTCTCACTCATGTCACCCAGGCTGGAGTGCGGTGGTGTGGTCTCG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GCTCACTGCAACATTCGCCTCCCAGGTTCAAGCGATTCTCATGCGTCAGTCTCCCAAGTAGCTGGGATTACAGG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TGCCCGCCACCATGCCCAGCTCACTTTTGTACATTTAGTAGAGATGGTCAGGCTGGTCTCGAACTGCTGACCTC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  AGGTAATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACAGTGCCCGGGCCATTTGTT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TTTATAAAATAGGGATTCAACATTTATTTCTTCCTGACGAATAACCAGTTGTGCCGACACCATTTATTAAATTT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ATTAAATAAGCTCTGTCAAATATTCCATATTTTCTAATCTATTCTACTGACTTTTTTGTCTATTCTCATGTAAT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  ATCATAATTTGATTATGGTATTAAAATATGTTAATCTTTTGCATATTTTCATATCATAAAATGTTATCTTTACA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CTTTTCTTGATAATTCCTGGACATTCTTTCATACAAACTTTAAGATTATTTTATTCAATTAAAAAAAACCCTGC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TAAGATTTTCACTGGAGTTGCATTTTATTTAAATATTAACACTGGGAGAATTGGAACTTTCCAAATAACAAGTT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TCCCACCCATAGTACATACTTCCAGCTTTTCAGACTTTGTTTTCTGTCTGCCACTGAGGATTATTTTATTTCAT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TTTTTTTTAGATGGAGTTTCACTTTGTCGCCCAGGCTGGAGGGCAATGGTGCGCTCTCGGCTCACTGCAAACTT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CGCCTCCCGGATTCAAGCTATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGATTACAGGCGCCTGTCACCATGC  2516

Query    1  -------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGA  43
                                           ||.|||||||.|.||||.||.|||..||||||.||||||||||
Sbjct 2517  CTGGTTAATTTTTTTTGTATTTTTAGTATAGATAGGGTTTCACTATGTTGGCCAGTTTGGTCTTGAACTCCTGA  2590

Query   44  CCTCAGGTGATCCGCCCACCTCAGCCTCC---------------------------------------------  72
            ||||||||||||||||||||||.||||||                                             
Sbjct 2591  CCTCAGGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCTAGCCAGTT  2664

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2665  TTCTCCTTTTAAGTCCTGTGTGTCCAGAGAGGGGTGGGCACACTCACATTCAAATCAATGCTGCCATCCCCCTG  2738

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2739  GCTCCAGGGACCCCTGCAGTTTAAGCTTCTCCGGGAAGCCTCTGCTTTCAGGTTTCTTTTCTGGCCCAGTCCAG  2812

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2813  GTGAAAAGAGCTCGCACTAAGATCTCTGCTGGGAGTCAGACTCACCTGTCTACCAGCTTGGGCAGACGCTTGCC  2886

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2887  TTGAGTCCTGAGGCTAGGCCACAGCTGGAGCAGCAGATAGAAGGGACAGGGTTGCACTTATAACACCACTATCC  2960

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2961  TCCCAGCCCTGGTTTTATCATCATCATCGAGAAAAATACAATTAATCAGCAGTGATCAAAGGTAAGTCTAAACA  3034

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3035  TTCCATTTAACTAACTTAAATGTGACCTGGTGTGCCGTGTCATTCTATAAATGACATAACAGAATAAGACTCAC  3108

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3109  TTTCTAATTCACAGCCTCTGGTTCAATTTCAAGTAAGCAAATACATTTTGCTTTGGTTTTGCTTACAATATTCT  3182

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3183  GGGAAATGCAGGCTATAAATAATCACTCAACTGTTTTGTGGGTCAACAGAATCACTACTACTTTCAGTTTCGTT  3256

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3257  GATGCCATTTATATCATGAGCTCAAGCACACGGGCGCTTCAGAAGGCACTATAAAGTTTAGTTTTGATGTGGTG  3330

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3331  TGATGTTCTGATCTATCTTGAAAGGTAAAGAAACCCACAGGATTCAGCGTCAAGCCAATCCATGCCCAGGCACA  3404

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3405  TCGCAGCTGCTAGGTCAGGAAATCTGTGCGTTTAGGAGGCTCTGAGGGTGATGCTGGGACTGTACTCAGGTAAT  3478

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3479  TAAACCCGGACAAACCCTGAGGCACAGAGAGGATGAGTAGGGGCCCTGGAGGCAGCCTGACCCACAGGGAATTC  3552

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3553  TCGAGTGTGTGGCAGCCCTGCCTGGGGAACGAAGACCCGAGCCTCAATTTCCTCACAGGGGCACTCGCAGGGTT  3626

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3627  GCTGTGAGGATCACAGGGGTAATGTATGTGGCAGTTTGTCATACCCCAGGGCTCTGTAAGCGGCAGTTATTTAT  3700

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3701  ATTGTTACTTATGACACTGAACTAAGAGCTGACCCTGACGCCGCCTCCTCAGAAGCCCTAAGTCTTGAGTGGCC  3774

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3775  TGGACACCACTACACACGAGAGTCAGGGGCGGGGGCTTTGAGATGGACCACCAGGAAAGCCGGGAGAGGGACCG  3848

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3849  GGACAGGGCTCCCACTTGCTCCTGGCTCACAGGGGCCCTCATAGTCATCAGGTGGACCCCAACAGCTGTGGCCT  3922

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3923  GACAAAGATTCCCCCAAAGGCCAGCCCACCTTACACGCTACATCTGCCCCAACAGCCCCCCAGCCCAACAGGTG  3996

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3997  GTGCCTTCATGGAGATGCCCATCCCTGCACGTAGCACTCAAGGCAGTTCTCCCACCTGTAAAGCTGTTTTTCTT  4070

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4071  CCCCTACAATCCACACCCAACCTTTCTAGGTCAATCCTGAAACCCCACACAAGCTCCCCAACTACACCAGATCC  4144

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4145  TTCAACTCCAACACGCTCACCAAGTCTCTTCAATAGTCACTTCCATCTTTATAATTTACCATTTTCTTGAGCTG  4218

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4219  TTTGTATATTTCTCTAACCAGAAAGACAAGAAGTAGTAGTATTCAGATTTATAATGACTGGTTACTGGTACTGA  4292

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4293  TTTGAGAGTTTCTTGTCAAGCGGATGAGTGTTTAAGGCCCACCACCTCTTTTCATATTCTTCTCTCTTAAAAAC  4366

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4367  CACATTTTCAAAGGTCTGCAAACGTTTTCCACAGTCAACAACTTGAGAGGCATGGAAGTTTCTTGCTTATCAGG  4440

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4441  GGCCAAGGGGGAATTTTAGAATCTTTTGGGTAAATGAATGTTTAACATCCCCTGAAAGCTGCTGGAGAGTGGGG  4514

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4515  AACCTAGGACCGTCACAAAACAGCCAGCCTCTGCATTGCCTCTGCCGACCAGGGCTGCAGAGGGCAGCCACCCA  4588

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4589  GGGCTCAGCCACCGGCAGGAGTGGAGGAAGCACAGCTCCAAAGGTCACAGAATTGCAGTCCTGGAGCTGGGTCC  4662

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4663  CTGCCAACTCCCGGAGAGTGAGCGAGGGGCCACTGGGCTGTGAATGCACTGTCTCTGGCAGTGGATGATTTCCT  4736

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4737  CGTTCTTCTACGATAGAGACTCTAATGCCTCTCAGGCCCCTGATGGTCTACAGGCCGGGTGACGTAATCCCAAT  4810

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4811  GAGGGTAAGAAAATTATTCCTGCTTTTCTCCAGGTTATAACTGGTGATTATGTAGGCTTGTCTGCTTTAATCTT  4884

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4885  CTTTTCTCAAAGTCTAGTAGAACACCTGCTTAACAACTTCCTGCCCACCCATCACTCAGACAAAAATGCAGCGT  4958

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4959  TCCAAGAACAATGGAGAGCCACCTCCGCAGCCAGACCTAGGGTTGGATCGCACGAAGAGCTGGAATTTGGGGAA  5032

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5033  CCACTTAAGACTGGATACATTTGGAAGGAACAGTCACACAAGATAAAATAAATATTTAGCTAAGCTTTCAAATT  5106

Query   73  -------------------------------------------------------------  72
                                                                         
Sbjct 5107  CTGGAAATGTCAACTAATAAAACTAAAAGTCTACTACCTCTGAAAGTATAAATCCAAAAAA  5167

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