Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- XR_002958640.1
- Aligned Length:
- 5167
- Identities:
- 63
- Gaps:
- 5095
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TACACAAGTGCCTTTCAACAAGTTACATACAAAATCAACCTGTGACATCAGGTAGATATTAAAAACTGATCAGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAAAAGCCTCTGCAGCAACTGAACTCCACACTTATGTGAGGCGGGAGGCTGAGTGGGCCCTGTGAAGACGCGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGTCACGGCTGCTAAAGCGTCCATGCAACACACAGAACAGCAACAAAAATAAACAGCAGATGCCATCGCGGGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGGGTGGGGGTGGGAGAAGAAAGGTGCCAATCTTCTGGAAGAACACAGAAAACCGCCAGGAGTCACAGCGCGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGAGTGTGCGGGGAAGGCGGCGGGGCCGGGAGTCACAGCGCGACGAGTGTGCGGGGAAGGCGGTGGGGCTGGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCTGGCAATGTCTTCTGTCTACAGACTCCCTCGCCACATCCAGCCCTCCCCACCCCTCCCACTGGCAGCGAGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAAATCCCGTCCGGGGAGCAGCAGGCAGCTGCGGTGGGAATTTCATGACACTAGAAAAGACTGGACTCCTCCCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATCCTACACCTGCAGAGCCCCACGCAGTCATTTAGGCACAAACATTCACTGTATTCGCCTGCATTCCATGAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCTCCGTTCTTTCCATGCTGAATTTGAGCCACTTCGCAGACAGAAGTGGCCCTGGGTTCTCAGCCCCACCTAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTGCCTAAGACTACAGCCACGCGACACATTCTCTGCAGCAGGCTACAAGAATTCTCCAAAGCATTATCTAAGTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTGGAAGAGCAATTACAGTTTTGGTACCAAAAGTAGGAGCGACCAGCCAGGCTCTCCCCCACAGACAACAGCAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGCCCACGGCCAGCCTCCTGCGATGAGTCACAGGTGCCACGTGAAATGCATTATACACACTCAGGGACAGACA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGCAAATGCTCCACTCATGAAGGATACAGAAATAGATGGAGGAGCTTCTTGGTCATTGTTTACTTCTCAAAAAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAATCATTCTATACATCCTTATGCACATGTTAACTTCTTACTCAAAGTACCTCCTGGAAATGTTTCTGAGTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACTGGTTTGCCTGTGATGAATTCTTTTAGGGACCTGCACATTTCATAATACGGACTTGTGATAATTTATTCAAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTTTTACCTACTTATTAGGTTCCCTTGATATCCAGCATTGTTTTTTTTTCCTTTTTGCTTTTTTTGGTCACTAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAAGCTGCCATAAAGATGCTTATGAAGATATTCCTAAGTAAGGTGCTTTTATTTTTAGGGTGAAATTCCCAGAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTATGTCTGAAGGCTGTAGTGTTTTTTATTTCACTGGGTGTCACCAAAAGGCGCTAACGCTTGACATCCCATCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGAACGCATGAAAACTCCTCTCCCCTCACGACCAGTGAATAGCGCTTACTGCCCTGGGCAATGCTGTGCCAGCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACTGAGCACAGTGTTGCCTTAATTTGCATATGGAATACCGGCAGACTCGAACACCATTCACATATTTCCTGGCG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATCTGAATTCCGTGTCTGTAAACTGCTTGTTCATCCCCCTTGCCCGTTGTTTCTTTGGGTTTCCTAACTTCACA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTCACTCCTACGATAAACATAATTTTCTTCTTGGATTTGTACTTTTTGTATTTTACATTCATGTCTTTAATCCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTTATTTTATTTTACTTTTTTGAGATGGAGTCTCACTCATGTCACCCAGGCTGGAGTGCGGTGGTGTGGTCTCG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCTCACTGCAACATTCGCCTCCCAGGTTCAAGCGATTCTCATGCGTCAGTCTCCCAAGTAGCTGGGATTACAGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGCCCGCCACCATGCCCAGCTCACTTTTGTACATTTAGTAGAGATGGTCAGGCTGGTCTCGAACTGCTGACCTC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGGTAATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACAGTGCCCGGGCCATTTGTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTTATAAAATAGGGATTCAACATTTATTTCTTCCTGACGAATAACCAGTTGTGCCGACACCATTTATTAAATTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATTAAATAAGCTCTGTCAAATATTCCATATTTTCTAATCTATTCTACTGACTTTTTTGTCTATTCTCATGTAAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATCATAATTTGATTATGGTATTAAAATATGTTAATCTTTTGCATATTTTCATATCATAAAATGTTATCTTTACA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTTTTCTTGATAATTCCTGGACATTCTTTCATACAAACTTTAAGATTATTTTATTCAATTAAAAAAAACCCTGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TAAGATTTTCACTGGAGTTGCATTTTATTTAAATATTAACACTGGGAGAATTGGAACTTTCCAAATAACAAGTT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TCCCACCCATAGTACATACTTCCAGCTTTTCAGACTTTGTTTTCTGTCTGCCACTGAGGATTATTTTATTTCAT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTTTTTTTAGATGGAGTTTCACTTTGTCGCCCAGGCTGGAGGGCAATGGTGCGCTCTCGGCTCACTGCAAACTT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CGCCTCCCGGATTCAAGCTATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGATTACAGGCGCCTGTCACCATGC 2516
Query 1 -------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGA 43
||.|||||||.|.||||.||.|||..||||||.||||||||||
Sbjct 2517 CTGGTTAATTTTTTTTGTATTTTTAGTATAGATAGGGTTTCACTATGTTGGCCAGTTTGGTCTTGAACTCCTGA 2590
Query 44 CCTCAGGTGATCCGCCCACCTCAGCCTCC--------------------------------------------- 72
||||||||||||||||||||||.||||||
Sbjct 2591 CCTCAGGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCTAGCCAGTT 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 TTCTCCTTTTAAGTCCTGTGTGTCCAGAGAGGGGTGGGCACACTCACATTCAAATCAATGCTGCCATCCCCCTG 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 GCTCCAGGGACCCCTGCAGTTTAAGCTTCTCCGGGAAGCCTCTGCTTTCAGGTTTCTTTTCTGGCCCAGTCCAG 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 GTGAAAAGAGCTCGCACTAAGATCTCTGCTGGGAGTCAGACTCACCTGTCTACCAGCTTGGGCAGACGCTTGCC 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 TTGAGTCCTGAGGCTAGGCCACAGCTGGAGCAGCAGATAGAAGGGACAGGGTTGCACTTATAACACCACTATCC 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 TCCCAGCCCTGGTTTTATCATCATCATCGAGAAAAATACAATTAATCAGCAGTGATCAAAGGTAAGTCTAAACA 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 TTCCATTTAACTAACTTAAATGTGACCTGGTGTGCCGTGTCATTCTATAAATGACATAACAGAATAAGACTCAC 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 TTTCTAATTCACAGCCTCTGGTTCAATTTCAAGTAAGCAAATACATTTTGCTTTGGTTTTGCTTACAATATTCT 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 GGGAAATGCAGGCTATAAATAATCACTCAACTGTTTTGTGGGTCAACAGAATCACTACTACTTTCAGTTTCGTT 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 GATGCCATTTATATCATGAGCTCAAGCACACGGGCGCTTCAGAAGGCACTATAAAGTTTAGTTTTGATGTGGTG 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 TGATGTTCTGATCTATCTTGAAAGGTAAAGAAACCCACAGGATTCAGCGTCAAGCCAATCCATGCCCAGGCACA 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 TCGCAGCTGCTAGGTCAGGAAATCTGTGCGTTTAGGAGGCTCTGAGGGTGATGCTGGGACTGTACTCAGGTAAT 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 TAAACCCGGACAAACCCTGAGGCACAGAGAGGATGAGTAGGGGCCCTGGAGGCAGCCTGACCCACAGGGAATTC 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 TCGAGTGTGTGGCAGCCCTGCCTGGGGAACGAAGACCCGAGCCTCAATTTCCTCACAGGGGCACTCGCAGGGTT 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 GCTGTGAGGATCACAGGGGTAATGTATGTGGCAGTTTGTCATACCCCAGGGCTCTGTAAGCGGCAGTTATTTAT 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 ATTGTTACTTATGACACTGAACTAAGAGCTGACCCTGACGCCGCCTCCTCAGAAGCCCTAAGTCTTGAGTGGCC 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 TGGACACCACTACACACGAGAGTCAGGGGCGGGGGCTTTGAGATGGACCACCAGGAAAGCCGGGAGAGGGACCG 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 GGACAGGGCTCCCACTTGCTCCTGGCTCACAGGGGCCCTCATAGTCATCAGGTGGACCCCAACAGCTGTGGCCT 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 GACAAAGATTCCCCCAAAGGCCAGCCCACCTTACACGCTACATCTGCCCCAACAGCCCCCCAGCCCAACAGGTG 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 GTGCCTTCATGGAGATGCCCATCCCTGCACGTAGCACTCAAGGCAGTTCTCCCACCTGTAAAGCTGTTTTTCTT 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 CCCCTACAATCCACACCCAACCTTTCTAGGTCAATCCTGAAACCCCACACAAGCTCCCCAACTACACCAGATCC 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 TTCAACTCCAACACGCTCACCAAGTCTCTTCAATAGTCACTTCCATCTTTATAATTTACCATTTTCTTGAGCTG 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 TTTGTATATTTCTCTAACCAGAAAGACAAGAAGTAGTAGTATTCAGATTTATAATGACTGGTTACTGGTACTGA 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 TTTGAGAGTTTCTTGTCAAGCGGATGAGTGTTTAAGGCCCACCACCTCTTTTCATATTCTTCTCTCTTAAAAAC 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 CACATTTTCAAAGGTCTGCAAACGTTTTCCACAGTCAACAACTTGAGAGGCATGGAAGTTTCTTGCTTATCAGG 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 GGCCAAGGGGGAATTTTAGAATCTTTTGGGTAAATGAATGTTTAACATCCCCTGAAAGCTGCTGGAGAGTGGGG 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 AACCTAGGACCGTCACAAAACAGCCAGCCTCTGCATTGCCTCTGCCGACCAGGGCTGCAGAGGGCAGCCACCCA 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 GGGCTCAGCCACCGGCAGGAGTGGAGGAAGCACAGCTCCAAAGGTCACAGAATTGCAGTCCTGGAGCTGGGTCC 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 CTGCCAACTCCCGGAGAGTGAGCGAGGGGCCACTGGGCTGTGAATGCACTGTCTCTGGCAGTGGATGATTTCCT 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 CGTTCTTCTACGATAGAGACTCTAATGCCTCTCAGGCCCCTGATGGTCTACAGGCCGGGTGACGTAATCCCAAT 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 GAGGGTAAGAAAATTATTCCTGCTTTTCTCCAGGTTATAACTGGTGATTATGTAGGCTTGTCTGCTTTAATCTT 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 CTTTTCTCAAAGTCTAGTAGAACACCTGCTTAACAACTTCCTGCCCACCCATCACTCAGACAAAAATGCAGCGT 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 TCCAAGAACAATGGAGAGCCACCTCCGCAGCCAGACCTAGGGTTGGATCGCACGAAGAGCTGGAATTTGGGGAA 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 CCACTTAAGACTGGATACATTTGGAAGGAACAGTCACACAAGATAAAATAAATATTTAGCTAAGCTTTCAAATT 5106
Query 73 ------------------------------------------------------------- 72
Sbjct 5107 CTGGAAATGTCAACTAATAAAACTAAAAGTCTACTACCTCTGAAAGTATAAATCCAAAAAA 5167
