Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- XR_002958817.1
- Aligned Length:
- 2893
- Identities:
- 63
- Gaps:
- 2823
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCAGCAGTATAGCCGTTGCTAAGGATATCAGAGAGATGGGCTATGTACACAACAGCTGGGCCCCGAGCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTGGGGCTGTGCAGATGGTAGGGATGCCAACCCTACTGAGGAGCAGATGGCAGAAACAGAGAGAAACGACGAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCAGTTCGAGTGCCAGGAACTGCTCGAGTGCTGGGTGCAGGTGGGAGCCCCCGAGGAGGAGGAGGAGGACCCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCCTGGTGGCTGAGGCCGAGGCTGTGGCTGCTGGCTGGATGCTCGATTTCCTCTGCCTCTCTCTTTGCTGAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTCCGCGACGGCCGCCCTGAGGACTTCTGCCGGACCCGCAACAGCGCAGAGGCTATTATTCATGGACTATCCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTCTAACAGCTTACCAGTTGAGAACAATATGCATATGTCAGTTTTTGACAAGCATTGCAGCAGGAAAAACCCTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GATGTACAGTTTGAAAATGATGAACGAATTACACCCTTGGAATCAGCCCTGATGATTTGGGGTTCAATTGAAAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGAACATGACAAACTTCATGAAGAAATATAGAATTTAATTAAAATTCAGGCTATAGCTGTTTGTATGGAAAATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACAACTTTACAGAAGCAGAAGAAGTCTTTGAAAGAATATTTGGTGATCCAAATTCTTATATGCCTCTCAAAAGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAATTGCTTATGATAATCTCTCAGAAAGATACATTTCATTCCTTTTTTCAACACTTCAGCTACAATCACATGAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGAGAAAATTAAGAGTTATGTGAATTATGTGCTAAGTGAAAAATCATCAACCTTTCTAATGAAGGCAGCAGCAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGTAGTAGAAAGTAAAAGAACAAGAACAATAATTTCTCAAGATAAACCTAATGGTAATGATGTTGAAATGGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACTGAAGCTAATTTGGATACAAGAAAAAGGTCTCACAAGAATCTTTTCTTATCTAAGTTGCAACATGGAACCCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCAACAAGACCTTAATAAGAAAGAAAGGAGAGTAGGAACTCTTCAAAGTACAAAAAAGAAAAAAGAAAGCAGAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GAGCCACTGAAAGCAGAATACCTATTTCAAAGAGTCAACTGGTAACTCCTGAAAAACATCAAGCTAAAAAAAAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAAGCATGGCTTTGGGAAGAAGACAAGAATTTGAGATCTGGCGTGAGGAAACATGGAGAGGGAAACTGGTCTAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AATACTATTGCATTATAAATTCAACAACCGGACAAGTGTCATATTAAAAGACAGATGGAGGACCATGAAGAAAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TAAAACTGATTTGCTCAGACAGTGAAGACTGATTGTGTTTGTAAAAGCTTGATGAAAGGACAGTTAAGTATTTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GATCACTGCATTTTGTTTGAAACTTGTGTCATTGATGTATTTTAAAACTTTTGTTTAAACCATTACAGTATTTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCTGTGACCATCAATTAATATGTGGGTTTGTGCTATAAGAGTTAAAGCATATGCTATCATTGTATTCTTTAAGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACTTTATTTTGATAAAATGTAAATTTGTTGAACCCTGCCACATTTAGTATCCCCACCACCAAATCCTGTTTCAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGAAAAAATTAAAACCTGATACAAAAAAAAAAATTTTCAGTTAACCTATTTTGTGTCTGTAGGCTGACCTCAAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCTGTAACATAACCCATTAAAATGAATTTTTTTTTTAAGACAGAGTTTCTCTCTGTCGCCCAGGCTGGAGTGCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATGGCGCAATTTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTA 1776
Query 1 --------------------------------------------AT-------------GGGGTTTCTCCATGT 17
|| ||||||||.|||||.
Sbjct 1777 GCTGGGATTACAGGCACACACCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGGCGGGGTTTCACCATGC 1850
Query 18 CGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------- 72
.|||||||.||||||.|||||||||||.||| ||||||.|||||||||||||||
Sbjct 1851 TGGTCAGGATGGTCTCGAACTCCTGACTTCA--TGATCCACCCACCTCAGCCTCCCAAAGTGCTGAGATTACAG 1922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1923 ACGTGAGCCACTGAGTCCTGCCTAAAATGAATTTTCTAGATGATTGAATAACAGTAGTCCTTTGATAGGAGATA 1996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1997 ATGATTTGGTTTATGGCCTTAATATACTACATAATTATTTAAGATGTTTATTAATAGAATGATAAATGTACAGA 2070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2071 GTGACCTATAAGCATGACATACTTTTGCTTTCAGTAGTTTCATGTAAAGAAAAAAATTTGAAAATAGTAATACC 2144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2145 TGAGGACCCATGGGAATAATAGACACTGGGGAGGTAGGTTGGGGAGCGGGAGCAAGAGCTGAAAAACTACCTAC 2218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2219 TGGGGACTCTGCTCACTACCTGGGTGACAGGATCATCCATACCCCAAACCTCAACATCACACAGTATACCCAGC 2292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2293 TAACAGACCTGCCCATGTGTTCCCTGAATCTAAAATAAAAATCAAAAATTTTTTTAAAAAAGAAAAAGACAATA 2366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2367 GTATTACCCATGGGACAAAATTTGTATTATTAGCAAGAATCATTTTGTGTCTCATTTAGAAACAATTTGACTTT 2440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2441 TGCTCCAGTGTTTAAACTTTGACAAAAATGGTTTTGAATAGATCTTTATAACCTGATGCCATAAATACAAGATT 2514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2515 CTCTGATACCTTCATTTAACATATCAATATTGGGCCTAAAACAGTATTCTGTAAAGCTTAAATTGGTATTAACT 2588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2589 ATGATCATCTTCATGTCTGTGATAGATAATAAACAAGGTCATACATACCTTACTAAACAATTTTGGTTTTTCAC 2662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2663 CAACATTTTATTCTTTAAAAGATTTAGACTAACAGAATTATTTAGGATTTCGAGTCATGTGCTTTATTTAGCAA 2736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2737 GTGAGTAAAAATATTGGAAGATTGAAGTATTTGCATAAAAAATCAAATGGTAGTGTTTTGTAATCTCTATTGTA 2810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2811 TTTCCTATTAAGGTTTCATATATTACTTTCCCATTGTTCCTGAATTTGTTATCCTGTATATAAACAGAAACATG 2884
Query 73 ------- 72
Sbjct 2885 GATGAGT 2891
