Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- XR_242802.3
- Aligned Length:
- 4474
- Identities:
- 63
- Gaps:
- 4402
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GACGCCGCGCACGCGCAGACCCAGCGCCGAGCCCGAGCCATGGCGTCCGAGCGGCTCCCTAACAGGCCCGCCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTGCTCGTGGCCAGCGGCGCCGCCGAAGGTGTGTCGGCCCAGTCCTTCCTCCACTGTTTCACGATGGCCAGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGCCTTCAACCTGCAGGTGGCCACCCCTGGGGGGAAAGCCATGGAATTTGTGGATGTGACTGAGAGCAATGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGCTGGGTGCAAGACTTCCGCCTCAAGGCTTACGCCAGCCCCGCCAAGCTCGAGTCCATCGATGAACCCATCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGCCGTCGGCCACGGTGTCGCCGCCCTGTGCTGTGCCACCAACGAGGACAGATCCTGGGTGTTCGACAGCTACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCTGACAGGGGGCCTGGGCCTGTCTCAGGAGCCCCCACCCCGCTCCCGCAGCCCTCTGTGTGTGAGCTCGTCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGCCCCCGGCTTCGCCCGCCTGCCGCTCGTGGTGGAGGACTTCGTGAAGGATTCGGGCGCCTGCTTCAGTGGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGCCTCGAGGGTGCCCCCTGCACTTACAGAAGATGGGGTGGGGGGCTTCCCTGCTGCAGCCTGGGGGAGAAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTCCTGGGCCCTGGGTTCTATAGACCCCCATGGCACTGACTCAGACCCAGACAGGCTGACCTACTGCTGACCCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGGAGCCCGCCTGGAGTTCGAGGCTCTCAGTGGGTGAGGTGGACATTGCCTGAGGTTGGTGCCCTCGGTCCTCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCAGCAAGCGAGCCTGACGCTGTCCACGTCGTGCTGGACCGCCACCTGGTCACAGGCCAGAATGCCAGCTCCAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGTCCCGGCCGTGCAGAACCTGCTCTTCCTCTGTGGCAGCCGGTGAGGGCACCAGGGTGGGCACATTCCTGCCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CATCAGAGCTGCACCCGGTGCTTTTGCCCAAGCTTTGACCACACGTCTGTCCTGCAGGAAATGAACCTGCTGGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TAGATGCACCCCCTGAGACAGCCCAGGTGTCTCCAGAGGCAGCCCCGTCTCAGGCTTCAGGGACCCCGCCTCTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCCTCCTGACAAGGGCCCTGGATGGCAGCCTGGTCTGGCCCTGATGGGATTGTTGGAGGCCTCCTGGAATCAGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCTGAGGGGGTGTCGGCTCTCCTGGAGGGTCCAAACCCCCATCCTCCTGCATGTTCTCTGGTAGGAGGCAGAGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAAGACCCCACGTGCCTGGAGAGCTGTGCTAGCTGCTAGGTGGTCCTCGGGAATTCCAGGCTGGGTTTTCTAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAGGACTGGTTGTCACGTGTGGTCACTGTTGACTAGACAGAGTCGGCTCGGGGGTCCTCTGTGTGGGTTTGCCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGCTGTGGCCTGTCTGCCACCCACCACCTCTTTCACTGTTGGTGGGGGCCTTGAGGGGAGGGCCCAGCCGGCGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAGCTGGCTCAGAACTTTGGCCAAAGGTGAACGGAATTTTTTAGGAGCAGCAGCCTCCTGCCCCAAGGCCGACC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGCACTGGCAGCACTTTCCTGTTGAAGAAATCTTCCTGGCGTGTGGTTTCAAAGTGTAAGCACCTCAGTGATGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ACCCTGTCCTAAGCATTGAGAGGCACGTTTACTTGTGAATATGAGACCATGAGATTCTCAATGATAGGAAAGTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTGTCCCCCACGGCCTTGCACAGTGGCCTCGGGTAGAGCGGCTATCAAGAGCAGACAGTGGTCCAGCCTGCTGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCACCTGGCCTGGGCTGTGGCCCTCCAGCGGGCTGCCCCCTGGCCCCAGGTTAGGGCGTCCAGGAGAGGCTTAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCCCTCTACTTCCTCACAGTTCCCCAGTTTGAGCCATCGAAGGCCTTCTTCCTGCCCACCTCCCCGTCTCAGCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACAGCCGTTCCCAAGCACCAGCGTGGCTCCTGGTGCCAGTGACCTGCCAGGAGGCCCCTTGTGATTATAAAACC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTTCAGTTGGGCCGGGCGCAGTGGCTCACACCTGTAACCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAAACAAAAATACAAAAAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTAGCCTGGCATGGTGGTGGGTGTGTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GGGAGGCAGAGCTTGCAGTGAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGCAATAGAGTGAGACTCCATCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CAAAAAAAAAACGTTCAGTTGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GGTGGATCATCTGAAGTCAGGAGTTTGGGAAAAGCCTGGCCAACATGGTGAAACTAAAATACAAAAATGAGCCG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGTGTGGTGTCAGGCGCCTGTATTCCCAGCTACTTGGGAGGCTGAGACGTGAGAATTGCTTGAACCTGGGAGGC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGAAGTTGCAGTGAGCCAAGATTGCGCCATTGCACTCCAACCTGGGCAATGAGTGAAACTCCGTCTCAAAAATA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AAAAATAATAAAATAAAGCCGTTCAATAAGGAGAATTTGGAAAAAAGTGGAAGAAGGAAGCGCTGCAGCCACAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCCCGCCCTGAAGGCTGCGTCCCTCCAGTGCCTCGCAGATTAGTCAGGATGCCCACTTAGCACTGGCCACGGGG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CCTTGCTCTGTCCCGGGTCCACTCTCATCCCCGTGTGGTGATGGACCTCTGTGGACAAATGCTTTTTATTTTAT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTATTTTTTGAGATGGAGTTTGTCTCTCGTCACCCAGGCTGGAGTGCAGTGGCACAATCTTGGCTCACTGCAAC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTCTGTCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGATTACAGGTGTGCGCCACCA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CGCCTGGCTAATTTTTGTATTTTTCGTAGAGACCGAGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CCTCAAGTGATCCTCCCGCCTCGGCCTCCCAAAGTGTTAGGATTACAGGCGTGAGCCACTGCGCCCGGCGTAAT 3034
Query 1 -----------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCG 57
||||||||||..|||||.||.|||||||||||.|||||||||||||||||||||||.
Sbjct 3035 TTTTGTTTTTAGTAGAGATGGGGTTTCATCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCA 3108
Query 58 CCCACCTCAGCCTCC----------------------------------------------------------- 72
.|..|||||||||||
Sbjct 3109 TCTTCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCGCCACGTCCGGCTAACAAGTACTTTTTTATT 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 TTTATTTTATTTTTTGGATGGAGTCTCACTCTGTCGCCCAGGCTGGAACACAGTGGCACGATCTCGGCTCACTG 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 CAGCCTCCGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTAGGACTACAGGTGCACACC 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 ACCACACCCAGCTAATTTTTGTATTTTTCCTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTTGGCAGGCT 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 GGAGTGCAGTGGCGCGATCTCAGCTCACTGCAACCTCTGCCTCTGCCTCCCAGATTCAAGCTGAGGCAGGTGGA 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 TCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAAGATGGTGAAACCCCGTCTCTACTAAAAATACAGAAAT 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 TAGCCGGGCGCGGTGGTGGGCGCCTGTAATCCCATTTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCA 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 GGAGGCGGAGGTTGCAGTGAGCTGACATCGTGCCACTGCACTCTAGTCTGGGTGACAGAGCAAGACTCCATCTC 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 AAAAAAAAAAAAAAAGAAAATATTGTAAACCTAGTGGCTTATAAACAACAGAAATCAGTTTCAGTTTTGGAGGC 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 TGGAAGCCCAAGATGAAAGCACCAGTAGATGCAACCTCTTTTGTGAGGGTGATGGTCCCATGATGAGGCTGTGC 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 CCCTGCCCTGTGACCGGATGACCTCCCAAATGCCCCACCTAATACCATCCCCTTGCAGGTGAGGACTTAAGCAG 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 GTGGGTTTTGGGGGGACGTGCTCAGGCCACAGCAGGGTGCATGAAGAGCCAGTGAGCCTCATTGAGCCCCTCTG 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 GTCAGCCAGATCTGACATTGAGCCCAGCATTGAAGATCAAAGCAGGTGGGGCTTTGGGATGTGAAGTGGGTTCT 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 GACGCGGGGCCCCACAGACCTGTCTCCGCGTGAGCTGCCTGCAGGCCCCTGCGTCATTCCTCAGCTGCGTGCGA 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 GGCCTCTGGCTTGGAGAGCCTCCCCGCTGTGCACAGTTCTCTCTTTGCCAGGGCAGGGCTTGGGGCAGCACCAG 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 GCTGGGGCAGAGGAGGAAAGCAAGAGGACAGACCTCCAGAAGAGCAGCGGAGGGCGGGTGAGGATTTCCCCATA 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 TACCAGTGTGTGTTCATCTACCCATGAGGAATAAAACCATGCAGCAGCATGCAAATGGTGTCCTGGTGTTCGCA 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 GCAGAACTGCTCATGGTAATGGATAAGTTGTTTTCATACAGTGGGTTGTCAATATGTTTAATAATTGTTGGTAT 4440
Query 73 ---------------------------------- 72
Sbjct 4441 CTATTAATAAGGGCAATATATTCATATGGTGGAT 4474
