Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- XR_427107.3
- Aligned Length:
- 4527
- Identities:
- 63
- Gaps:
- 4455
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GATGTAAGAGGCAGGGCACTCGGCTGCGGATGGGTAACAGGGCGTGGGCTGGCACACTTACTTGCACCAGTGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGAGAGGGGGTGCAGGCTGAGGAGCTGCCCAGAGCACCGCTCACACTCCCAGAGTACCTGAAGTCGGCATTTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AATGACAGGTGACAAGGGTCCCCAAAGGCTAAGCGGGTCCAGCTATGGTTCCATCTCCAGCCCGACCAGCCCGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACCTACCTGAGTGAGAAGATCCCCATCCCAGACACAAAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCGGGCACCTTCAGCCTGCGGAAGCTATGGGCCTTCACGGGGCCTGGCTTCCTCATGAGCATTGCTTTCCTGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCCAGGAAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGCGGGATTCAAACTTCTCTGGGTGCTGCTCTGGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCACCGTGTTGGGCTTGCTCTGCCAGCGACTGGCTGCACGTCTGGGCGTGGTGACAGGCAAGGACTTGGGCGAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTCTGCCATCTCTACTACCCTAAGGTGCCCCGCACCGTCCTCTGGCTGACCATCGAGCTAGCCATTGTGGGCTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAATCCCACTCTGGGGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCGTCCTCATCACCATCGTGGACACCTTCTTCTTCCTCTTCCTCGATAACTACGGGCTGCGGAAGCTGGAAGCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTTTTTGGACTCCTTATAACCATTATGGCCTTGACCTTTGGCTATGAGTATGTGGTGGCGCGTCCTGAGCAGGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGCGCTTCTTCGGGGCCTGTTCCTGCCCTCGTGCCCGGGCTGCGGCCACCCCGAGCTGCTGCAGGCGGTGGGCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTGTTGGCGCCATCATCATGCCCCACAACATCTACCTGCACTCGGCCCTGGTCAAGTCTCGAGAGATAGACCGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCCCGCCGAGCAGACATCAGAGAAGCCAACATGTACTTCCTGATTGAGGCCACCATCGCCCTGTCCGTCTCCTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TATCATCAACCTCTTTGTCATGGCTGTCTTTGGGCAGGCCTTCTACCAGAAAACCAACCAGGCTGCGTTCAACA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCTGTGCCAACAGCAGCCTCCACGACTACGCCAAGATCTTCCCCATGAACAACGCCACCGTGGCCGTGGACATT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TACCAGGGGGGCGTGATCCTGGGCTGCCTGTTCGGCCCCGCGGCCCTCTACATCTGGGCCATAGGTCTCCTGGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGCTGGGCAGAGCTCCACCATGACGGGCACCTACGCGGGACAGTTCGTGATGGAGGCTGGAGTGCAATGGCGCG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATCTCCGGCTCACCGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGACCAGCTGGGA 1406
Query 1 -------------------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTC 31
|.|||||||||||||||.|||||||.|||||
Sbjct 1407 TTACAGGCCACCACACCCAGCTAATTTTGTATTTTCAGTAAAGACGGGGTTTCTCCATGTTGGTCAGGGTGGTC 1480
Query 32 TGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC--------------------------------- 72
|.|||||||...||||||||||||.||||.|||||||||||
Sbjct 1481 TCGAACTCCCAGCCTCAGGTGATCTGCCCTCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGC 1554
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1555 GCCCGGCTCTTTCTTTCTTTTTTGAGACAGGATTTCACTCTGTTGCTCAGGCTGGAGTGCAATGGCGCCATCAC 1628
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1629 AGCTCGCTGCAGCCTCAACTTCAGCCTCCCGAGTCATTGGGACTACAGGCTCATGCCACCACACCAGGCTAATT 1702
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1703 TTTAAAATTATTTGTAGAGATGTGGTCTTCCTATGTTTCCCAGGCTGGTCTCGAACTCCTGGGCTCAAGTGATC 1776
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1777 TTCCCGCCTTGGCTTCCCAAAGTGCTGGGATTACAGACGTGAGCCACCCCACTCAGCTTTGTTTCCTTCATGTA 1850
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1851 GCCCAGAGGGCGACACTATAAGCCCCATTTTACAGATGAGAAAACAGATCCTGACAGATGAGGTGACTTGCTGG 1924
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1925 AAGCTGCAGACCCAGGACTAACAGAAGCCTTTTCCCCAAAACTGTTTAGTCTTCAGCAACCAGCTATGGGATGG 1998
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1999 GAGCTCCCCATTTCTCCCCACCCATCCCCTCTTGCCACCTAGGGACAGAGCTGTCCCAGTTCAACAGTGGAAAA 2072
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2073 ACAGAGCATGCCCCCAGGGATAAATCGGTTGAGGGACTACAGAGGATCTCTCCTCTGGAATCCCCAGTCCTGTC 2146
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2147 TACTCCTCACCAAGGAGTTCACCCCCACCCCAGGGCTTCCTGAGGCTGCGGTGGTCACGCTTCGCCCGTGTCCT 2220
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2221 CCTCACCCGCTCCTGCGCCATCCTGCCCACCGTGCTCGTGGCTGTCTTCCGGGACCTGAGGGACTTGTCGGGCC 2294
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2295 TCAATGATCTGCTCAACGTGCTGCAGAGCCTGCTGCTCCCGTTCGCCGTGCTGCCCATCCTCACGTTCACCAGC 2368
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2369 ATGCCCACCCTCATGCAGGAGTTTGCCAATGGCCTGCTGAACAAGGTCGTCACCTCTTCCATCATGGTGCTAGT 2442
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2443 CTGCGCCATCAACCTCTACTTCGTGGTCAGCTATCTGCCCAGCCTGCCCCACCCTGCCTACTTCGGCCTTGCAG 2516
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2517 CCTTGCTGGCCGCAGCCTACCTGGGCCTCAGCACCTACCTGGTCTGGACCTGTTGCCTTGCCCACGGAGCCACC 2590
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2591 TTTCTGGCCCACAGCTCCCACCACCACTTCCTGTATGGGCTCCTTGAAGAGGACCAGAAAGGGGAGACCTCTGG 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 CTAGGCCCACACCAGGGCCTGGCTGGGAGTGGCATGTATGACGTGACTGGCCTGCTGGATGTGGAGGGGGCGCG 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 TGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCAACCTGGGGGCTTTAGGGACCTGCTGTTTCCT 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 AGCGCAGCCATGTGATTACCCTCTGGGTCTCAGTGTCCTCATCTGTAAAATGGAGACACCACCACCCTTGCCAT 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 GGAGGTTAAGCACTTTAACACAGTGTCTGGCACTTGGGACAAAAACAAACAAACGAAAAACATTTCAAAAGGTA 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 TTTATTGAGCACCTGCAGGCGTGACCTGACAGCCCAAGGGTGGGTGGGGTGAGGGCTTGAGGACTTGGGCGGGA 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 CACAGGCTCCAAACTGGAGCTTGAAATAGTGTCTGATGAATGTTAAATTATCTATCTATCTATTTATTTATTTA 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 TTTGAGACAGGGAAAGGGTCTCCCTCTGTTGCCAAGGCTGGAGTGCAGTGGCGCAATCTTAACTCATTGCAACC 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 TCCACCTTCTGGGTTCAAGCGATTCTCTTTATTCAGCCCCGGGAGTGGCGCGCGCCACCACGCCCAGCTAATTT 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 GTGTATTTTCAGCAGAGACGGGGTTTGCCATGCTGGCCAGGCTGGTCTCGAACTGCTGGATTCAAGTGATCCGC 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 CCATCTCCGTCTCCCAAAGTGCTGGGAATTACAGGCGTGAGCCACCAAACCCGGCCTGATTAAAGTTAAATAAA 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 TACTAGTTCCCTTCTCGTCCAAAGGAGCAGGGAATGGGAACCGGGAAGGCACGAAGTCTCTAAAGCATCCAGAA 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 GACCCCTACACCAGGGTCTGGTCCGCTCCTATTCGCCGCAGCCTTTCTGTTCCGCCTGCAACCCATTTTCCAGA 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 CAGTAAAACGGCGGCGCACTTCTTTCTCCGTCAGGCACCAGGTCATAAGGAACCCAAGAGTCTGTGCCTCTGAG 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 GCCCAAATTATTTGCTGTTTCCTCAGGGGAGCCGGCGGCCGCGACTCCCACGCCGCGCCGTTACCGCTCCCTCT 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 CTGCTGACTGCTCCCCCTAGGGGCAGAGACGGTCCCGACGCCCGCCATCCCGCCCCGGCCTCACCCCTCCCCGC 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 CAGGCGGAACGACGCGGGGAGGCGGGCGCTCGGGGCTCGCGCCAGGGGCCCCAGAATCCTTCGGGGAGAGTGGG 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 TGGGAGGAAGCTGTGTGGGCGGGGAGCCCCCTCTGCCTTAGGGAGCGGCTGGGCACCCATTCGCCCCATTCAGG 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 GGCTGCACTTTATAGACGTTCCCTAGGCTGTTTCTAGGCTCCCCCAAGTCCCTCCTCCAGCCTCGTCGGGTCCC 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 TCAGACCCCAGCCCAGGACCTGCGGAGGGCCGCAGCGAGGAGAGGCCAACAGGCCTTTCCCTAGAGTTGAACCT 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 GGGCCGGGTGTTGCACCTGGAAGAACCCCCGATTTCCTGGGGACCCAGCAGGGCAGGCGGCCTGGCTCCGCGCT 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 CAGGTCCGGACGCTTGTTTATGAGAAGAATTTCCTCTTTCTTAAAAGGGCAACGATGCGAGTGGGTCCCTCAAG 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 GAGAGAAGAGATGGGACCGGTCTGGTGCGACCTGGGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCC 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 GCCTCCTCTGGGTTTGGCACTGGAGAAGATGGGTCCATGCCAGCTGAAGGAGGAGATGGATGGGGGACGTTTAG 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 CGAAGAAAGGCATCTCCCAGATCCTTTAGCCTCCTGGAAGTGCCCCCGTTGTACCCCCTACACACCCCTCTTGG 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 CATTGAGTGCCAGTCCTCTGCCAGGCTCTGTGTTACAAGTTGGGGAGGGCGGCAAAGTCCCGAATTAAAGATGT 4514
Query 73 ------------- 72
Sbjct 4515 CAGTTCTCAAGGA 4527
