Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- XR_923257.3
- Aligned Length:
- 3979
- Identities:
- 63
- Gaps:
- 3907
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAGCTATGATCATGACACTGCACTCCAGCCCAGGTAATGGAGAGAGACACTGTCTCTAAAAAAAGTTTAAAGAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTAAAACGATATCAAAGTACATAATACAAAGGACATAACTTAAAATGTTGAAAGTGGTAACAAGATTTATAAAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAACAGAGTCACCTGTACCACTCTCTATTCCTACTTTGAGGGACAAACACTTTCAACTGATTCTTTTCCTGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATTTTCCTTCACTTTTCTGTGTCCCTGGTTCTCAAAGTGGGGTCTCTAGAATTTGGGAGAAATGCAAATTCTTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GACCCCACCCCAGATATACCGAATCAGACTATGAGGGTGGAGCCCAGCAGCCAATGTTTAAACAAACCTGTCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGAGATTCTGCCTCACGACCCCCCAAAGTTCTGACTGTTCTGGGTGAGGTGTTTATACAATGACTTCCTCCTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGGACTGTGAAGGCTTACCTTTCTTCCACCCTCTCCCCAGCCCCACAATCCTGCCTTCTTATCTTTTCAGCACA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTATATGACCAATTTTGATGATGTTAAAATTCAGTGTTTGTTGTAATTATGTAAATATTTTCACAACTATCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TATATTTCATGTTTTATGTAACTTTTATTTTCCCTGGACTGAATAACTGCCTCATTTTTTTGTTGTCGTGATGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTTAGTGGGTTTGTTGTTGTTGTTTTTTAGAAACGAAGTCTCAGTATGTTGCCCAAGCTGGTCTTGAACTCCCG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTCTTAAGCGATCTCCTTGCCTCAGCCTCCCGAGTACTTCTCAGTTTTCTATACAAATCTCTCATCTATCCCTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACCTCTCAGTGGAGAAACTCCAAGATGAACCCCAAAGATCTCCATCTCCAGCTGTTCACACTCCTATGTAATCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTAGCCCTTGGGTGTGGAAAGGACTTGTGACTTACTTTAACCAACAACAGAATATAGCAAAGATGCCTAAGAAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGCAAATGAGAAATAATTTTCTCACCTGGTCACAGCATCTACCAAGAATGGCGCTGGGGGAGAGATCAGTGAGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTCCATCTTTATTACCATGTCCCTCCTTCCCTGTCAAAAGCATTTCACATCCCGCAAGTCCATTAGACATGGCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCACTCTGCTGTGGGAGATACACACACAACTAAATACAGGGTAACAATACCTGCCTGGTCAGCACTTCAGCTCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAATCAAGCTTCACTAATGACTATGAGATTAACGAAGATGGTTTTGATAATTATGACTGTTTGTTTTGTTTTTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTAACTATTCTTCATCTGAGACTTTTACTTTTGTTTCTGCCAGCATCCTGACAAACATTTACAACCAGAAAGGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TAAGCCACTAGCTTGAAGCCATTAAGTTAAGTTCAGTTAACAAGGCTTTGATAACAACCCTCATGTTTTTAAGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAAAACAAAGAACCTAGTAATCCTTTAGGCCTTACCCTGAAAGGGTAGCCAGAAGAAAAATCACAAATAACATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AACTTACCGGAACAATCCACCGGGGTGTGATCATGGATGTGGAAGACACCTGAAATAATTTTATATGTATGTAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTACTTTTTGGAAAGACTGACTTATTTTCATACTTATAATACTTACTTACATCTATTATGAAATCCATTCTAGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGGGCAATTCTTAATTCTTAATGGTGTTCCTTGAGCTGACATGGACTTCTAAATCCAAGACCCTTTTCTGTTAT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ACAACACAGATGCTATCCCTCACCACTTAAGAAAGTGTCATAATTTTGAGAATCTCTTATCTAAAAATTTACCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTCAAGAATCTATTACTACTTTCAGTTCACTTAATAGGACTGCCCCTACCTCACACCCAGTATTCAGTTTAACA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTTTATTTTCTGAAATTTCAGTTAATTAATTACAAATAATGATAGCCTTCTTGGTAGCAGCCTGAACAATGGAT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGTGACTAATCCAAATAAAGAGCAACAAGAAAGTACACAGAAAAATAATCTGTTTAGATACAGATCATTCTCTA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATTATCATGTATGCATGAAGAAAGCGCAATAAAAACACCCATATTGCTCCTGGTTCACAGGGCCTTTGATACAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TATTTTTATATGTTTAACTTTCTATTATAGGTCATCTATGTGTAGAATTATAAACTAAGGAAACCCACCCATTT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TACTAGTAATTTAGACTAGTCCTTGCATTGGTGGCCTTACATACTCATAAGAAAAAACTAATGTAAGTCCAGGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ATTAGTAAATTAGATAACCACCAAAAGAATAAAAACACAGGCTGGGCGCAGTGGCGCACGCCTGTAACCCCAGC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ATTTTGAGAGGGCGAGGTGGGCAGATCATGAGGTCAAGAGATCAAGACCATCCTGGCCAACATGGTGAAACCCT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GCCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTGGCATGCGCCTGTACTCCCAGCTACTCGGGAGGCCAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGCAGGAGAATCGCTTGGAGGCGGAGGTTGCAGTGAGCTGAGATCACGCTACTCCTGGCAAAAAAGCAAGACTC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CATCTCAAAAAAAAAAAACCCACAAAATCTGACTTTCCTACCAATACTTTTTAGATGCATGTTAACAGCAGGAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ATAAGAGAGAAAAAATATCATAAATAATAGTAAACAAAAAATAGTTTGACAGACTTTTCCACACTTGCAGTTAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTCTTATCCTTGGTAAAGTCTTTGTTTATTAATCTAAGCTGGTCATTCCCAACGGGTGGTTCCCAGACCACATC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGCACCACCTGGGAACATGTTAGAAACACAACTTTTCAGACCCCACCCAAGATATACCAAAATTAGAAACTTGG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AGGTGGGGCCCAGCAATCTTGTGTGTTAACGTCCCCTCCAAGGGATTCTGATATACACAAAAATTTGAGAATTA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 ATGATCTATGCAAACATTCAGTATCATGTGTATTTCCAAGCCTTCAGGATGGCATCTAGCCCCTACAGCAATTC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TCGTCATATCACTCATAAGGTACAAAGTTAGTCATTTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AGTCTCACTGTGTCGCCCAGACTGGAGTGCAATGGTGCTATCTCGGCTCACTGCACGCTCCATCTCCCAGGTTC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CAGCAATTGTCTTGCCTCAGCCTCCCGAGTAGCTGGCGCTACAGGTGTGCACCACCACCCCCGGCTAATTTTTG 3182
Query 1 --------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCC 60
|..|||||||.||||||.||.|||||||||||.|||||||||||||||.||||||.||||
Sbjct 3183 TATTTTCAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCTGCCC 3256
Query 61 ACCTCAGCCTCC-------------------------------------------------------------- 72
|||||.||||||
Sbjct 3257 ACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGTCCAGCAAAGTTAGTCATTTCTATCTCT 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 CTCATCCCTGGAGGGAAGGAACTGTTTCAGTTGGCCCTCCATATCCATGAGTTGTGCATCTGTGGATTCAACAA 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 CTGTAAATCGAAAATATTTGGAGGGAAAAAAAGGATGGTTGTGTCTGTACTGAACATGTGCAGGCTTTTATTCT 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 TGTCATTATTTCCTAAACAATACAATATAACAACTGTTTACCAGCATTTACACTGCATTAGATATTAGAGGTAA 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 GCTAGATTATTTAAAATATACTAGAGGATATGTGTAGGTTATATGCAAACACTACACCATTTTATATGAGATTT 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 AAGCATGCATGGATTTTGGTATCCAAGGGGAGTCCTGGAACCAATCCCCCACAGATACTGAGGGACAACTATAC 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 TTAATACAGTATCTTCCAGACTGTAATAATGATTGATATGTTCAATGCCATTCTTACGCTCTCATCTTTCTATA 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 AAACTTTTTAAAAAATTAAATATATCCTTATTGTCTCAAGAAACTGCTTTATCCCCATGTTTTCTCTCATTTAA 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 TATGATGTTGAATTATAAAAGGCTTATAGAGACATGTGATTTGTAGACAGTGATACACAAATTCAAAGTGGTAA 3922
Query 73 --------------------------------------------------------- 72
Sbjct 3923 AATTTTAGGACAGAGAGGCAATGCTAAGTGGTTATTAAAACATAAACTCTTATCAAA 3979
