Nucleotide Global Alignment
Description
- Query:
- TRCN0000492083
- Subject:
- XR_926425.3
- Aligned Length:
- 5462
- Identities:
- 63
- Gaps:
- 5390
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTGGGCGACAGAGTGAGACTCCATTAAAAAAAAAAGCCTTCAGGCTCATCACCTTGGTGAGGCAACCACCAAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTAAGTGACCTTCCAGAGCCCCCAGGCATCCCCCTACACAAATACTTTTTTCTAAGAGTGACTAAAATTGGTGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTCCTAACCTACATAAAAAATCACTTAGGTGAGCAGTATAAAATACCACTCACTTTTCCTCCCCTATAAGATTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGATATATCTAAAGTCTTCAGGTCTGTATATAGTAGTGACTTAGCTACATCACTGGTTAAAGTAAATGTGCCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGACTGACTTCCCAGGTCTCTCATAGGCACGCCCTTCAAACCCACATTGAACCTGAAATCCCAGTGTTCCAGGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCAGTTGGTTTCCAATGGCACCCAGGTGTCAGGTTGACCCGATAGGATGCCTTAGGTATCGGGGCCGTGGGGGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGGGAGGATGCAGGTGCCACCTTAAAGCATCACACCATCCCACCAGGCTGTTCCAGAAAACACAAAACTTTTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGACTCTGTCTCCAGAAAGGGACTTAGTCTCCAAAGAGGTTGGTTTTATCTAGATGAGTTGATAGAGAATGTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGCTGGAATTGGGCTCTGATTCAGTCAGCGTTTGCTATTTAAATCAGTCTTAGATAACTTCCCTATCAATTGCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTCTCTCTTGCATGAAAATTACTTCCTGACTGCCTCCTCCTAGCTCAGTACTGTTCTATTGCTTAGGACAGGAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGGGCAGTGCCCTCGTAGATGTTCATGCGTGTACTGATAAAAATTACCTATAACTCTTAGTGTGATCTAACACT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCAAGCAGTATCTGAGAGAAGGGGTATCGGATATAAAACAAATCATGGCCTGCCAGAGAAGAGTCCTTCAGTGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCTCTTGAGAGTTGAAGCCAAAGAGGCCAGATGCTGAAGAACTTGGATGCTGTCTTAATGAGTTTCACAGTTAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCTGTAGGTGATGGAGAGTCATAAAAGAATTTTAAGTAGGGGAATGACATAATCACACTTGCATTTTAAAAATA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGCTTTGGCTGTGATAAGTGGGGAACGGGATAAGGGTTTAACTTATCATGCACACTAAATTACTTCAAAACAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AATGCCTTCAAACAACAGCACATTTGGTTGTGTGTGTGGCAGGGTGGAGATCAGGATTTCTGGAGCTGCTTAGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGAGAGGTTTTGGTTAAGGGTCTCCCAGGAGGTTGCCATGAAGGTGCAGGCTGGGGTCACAGGCACTGGAAGGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATGGCTGGAGCAAGCAGACCATTTCCAAGTGGCTCACTCTCATAGCTGCCAAGTTGGTGATTGCTGTTTGTAGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TACATCCAGTTCCTTCCACATCAACCCTGCCATAGGCTGCTTGAGTAGTCTCATGACATGGCAGCTGGCTCACC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCAGAATAAGGAAATGACTTACTGCAAAGAACCACTCTTCCCCACGAGACTTCGAGAAGACCCGCTGTCACGGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTGAGTTGTGTCCTCTTAAAATTCAGATGTTGGAGTCCAAACCCCCAGTAACTCAGAGTGTGAACGTATTTGAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGGTCTTTAAAGAGGTGATGAAGGTCTTTGTCTCTGACAATTTGCCTCTGTGACGTGGATGGGACTGGAAGTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CATTTGGAGCCCTGTCTTCTCCACCTAGGGAGAGAGACCCCATGAGCTCGTCAAGCTCCTTCTGTGACTGATCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GAGATCCCACCGTGAGTCCAGCTCCTGGTCCCATGCTCTGGATATATCGGTCCCTGGCAGCGTGCAACTCCTTA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCCAAAGACGTGGCAACTGCGGGTGAAGTATCTCTGGGCAGGAAATCAATGCAGAAATGCAACTGGGGAGAGGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGCTTGGGGGCCAGTTCCAGGGAGATTGGAACTGCTGTGTTCTCATCAGCAGAAGTGGCCCCTGCCCACCCCCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCCTAATCCCTTCTCATGTGGGAGAAGGTCTGTGAGCCCTCTCCCTACCAGGCAGGTTCTATGGCAATGTGGGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ACATACCCTGGGGCAGGGGCCGAGGGACTTAACTCACTTCATGAGCGCCAATGGAGGAGCGAAGGGAATGCCTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATGAAAACAACATTCTACCAGTATGCACTGTTTTCTAACCTACAGAGTGCCTCTGTGTTCACTGTCCCATTTGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GAATTCTAAGTAGAATTCTGAACAGGCTGGAGCAGATTGCCCACCCCAAGGGACAGATGTTGGCTGGTACTGTT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGTATTCATGGAAGATTCCTTCTGACACTCCCTCCTTCTTTGTAATTGCCATGAACTGGAGCACTGGGCCAATA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TAAATCATCCAAGGGTGAACACGCTGCACATGGACGGCTCCTCTTTGTTTTTGAAGGGATTCCATCTCTATTTT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GCCATGTGCTCCTTCACCCCACTCCCCACCCCCGTCTTTCATTTCTTTCTCTGGAAAAGATACTTCAACTCACA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGACTGCGATGTTGAAACGGACACCCAAGAGCATCACAGATGGGCCAGGCCTGGACCTCTCGGGACAACATTCC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TCACGACTTTTAGATAGAAGAGATTAGAGATTTGGGACTGGTGGCAACTGGTAACGTTTTCAGTGTTTGGTAAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CAGCCAGGGTCCGGAGCTCTGGGAACAGCCTGATTTAGCTCTTTGTTTAAGTTTTGTGTTAGAGGCTCCCAAGA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGCTGATGCAGGGGAAAGAAATTAACAACCATGGCTCATTCACAGCCAGGCAGCCAAATGGACAGCTCTATAAG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ACTCAAGCCGACAGCGGAGAGAGTGCAACCAAACAGCCTTGGCCCAGCTTTCAGAGGAGAACGTTATTCACCCC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AACTGCTCTGCATCTGCCTGGATGTCTGCCAAGATCTGTGAGCATTACAGCGTTGGTATGCTTTGGGTGAGGCC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TGTGGCTATGGCAACAAGTTGGGAGCAACCCGGTCCCTGGGAATGAGAACAGTGTCTAAAATCAGGCAGGCGAG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GGGCAGGGAGGAGAGGTAAAGGTTGGACTTGCCTGAAGATGGAGCCGTTTTATTGTTGTGGGTAAAGCTGCTAC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CATTAGGGGCTGTTTACAGAGTGGGTGCAGCTCAAGCTGGGAGCATGTTAGACTCAGCGACTACGATCAACCTA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TTGACTTGTTCCCATGAGACAGAGTAAATTAACTGTTGCAGTACTGGTCATGTACCACCAACCTCCTGTGAACC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AGCCCTCAGTGAAACATTTATGTGAAAGGCCATGGTGTTCCCATAAGAGGGTGCATGTTCTCTCCCTTGACTAA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CTCTTCAGTATGCCTCATTCTCACGCGCTGGTGTGCAGGAAGGAGTCCAACATGCCCCATTGACAGTCATGCCC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TGTATGTGGAAAGTCTTCAGGTAGAGCACTGGGCTCAGGTTTGAAGATGTGAGTTCTAATCCTAGCAAGGCCAT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TACCTCCCAGTGACCTCATGTCTCGATTTCCTCAACCACAAAACAAAGGCATTGGTGAGCTGACCTCTAAGGCC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TCTCCAGTTCTCACCTTCTGTGTCTCTACAGACTGGAGACTAGAAGATTATGGGCACTTTTATTGAGTCTTCAT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TTTGTTTCCATTTCTTTGTAGTCATCAGCTGGAGTTGAGGACAAGTTTTAACAATAGATAGGTTTCTTTTTGTC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TCTTTTTAAAAAATTTTATTTAAAATAAATGCCAAGTGTAGTGGCTCATACCTGTAATCCCAGCACTTTGGGGA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 GGCCAAGGTGGGAGGATTGCTTTTGAGTTTGAGACCAGCCTGGGCAACGTGGTGAGACCCTGTTTGTACAAAAA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 ATTTTAAATTAGCCAGGCATGGTGGCGTGTGCCTATAGTCCTAGCTACTCTGGAGGTAGAGGCAGGAGGATCCC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TTGAACCTGGGAGGTTGAGGCCACAGTGAGCTGTGATTGTGCTATTGAACTCTAGCCTGGGCAACAGAGCAAGA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CCCTGTCTCTTAAAAAAGACTATTTTTTAAGAACACTTTTAGGTTCACAGCGAAATTTGGAGGAAACTTGGCAT 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 ATGTCATATGCCCCCTGCTCCCATGCATGCACAGCCTCTACCATTAGCAATGTCCCCACTCAAATGGTACCTTT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GTTGTAATCAACAACCCTGTACTGACACATCATCATCACCCAAACTCCATAGTTCACATTAGGTTTCACTCTTG 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 GTGTGGTGTACATTCCATGGGCTTGAACAACTGTATAATGACATTATCCACCACTGCAGGATCATACAGAGTAG 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 TCTCACTGCCCTAAAACTACTCTGTGCTCCACCTGTTTGTCCCTTCTTTCACTCTAAACTCCTGGCAACAACTG 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 ACCTTTTTACTGCCTCGATAGCTTTGCCTTCTTCGGAATGTCATGTAGTTGAAATCATACATCATGAAGCCTTT 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 TCAGATTGGCTTCATATAGGTTTCCTTCCTTCCTTCCTCCCACCACCTTCCTTTCTTTCTGTATTCCTAACTCT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 TGGATGTATTTTCCCCAGCATCATGACTTGATGGGACTTTTGCTAAGATAGGCAATCATAGAAAGTCATAAATC 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 TCTTGTCAGCCTTATTGGCTCACCTCCGAGATGGTTCCAACACTCTTTAAGGCCCACTTTTCCAATCCACAGAT 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 TCCCCAGCAGAAGTCCAAGCTGCTGAGCCTCACATCATCTTTTGCACTAGTAATCTTTACCACTACTTCACTGT 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 AGCATTTGAAAATTTTCATATGAAGCCATAGTTCTGTGTCTTTTTTTTTTTTTTTTTTTTTTTGGAGACGGAGT 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 CTTAACCTGTTGCCCAGGCTGGAGTGCAGTGGCACAGTCTTAGCTCACTGCAAGCTCCGCCTCACGGGTTCAAG 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 TGATTCTTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCGCCACCATGCCCAGCTAAATTTGTTGGCATT 4884
Query 1 ----------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCT 64
||||||||||.||||||.||.|||||||||||..|||||||.|||||||||||||.|||..|||
Sbjct 4885 TTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTTACCTCAGGTGATCTGCCTGCCT 4958
Query 65 CAGCCTCC------------------------------------------------------------------ 72
||||||||
Sbjct 4959 CAGCCTCCCAAAGTGCTGGGATTAAAGGTGTGAGCCACCGCACCTGGCCTGAAGCCATAGTTCTTAACCTCAGT 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 TGTGCAATAGAATTATCTGGGGAATTTAAAAATTAGAAAAAACCCATGCCCTGAAGATTGTGATCTAACTGGTC 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 TTGCGTAGCGCCTGGGCATTGGTATTTTTTAAATGTTTCCCAACTGATACTAATGTGGCCATTCTGCAAGCCAC 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 AGTTGAAAGGCTTATTCAAGCATCCTGTTGCTGAATGCATGTCGTCCTTACCACATGACTCTGGAGGTTTTCTT 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 GTATTCTGATGTGGCTGCCCTGTTGAGGCCTGCCCCTTAGAGTGGAGATTATCCCCTGCAGTAGGCTGCCTGGA 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 ATATGATCCCCAGTGATCCCTGCTTCCTGGTATTCAGGCCCTGGTGTGATCCCTTTCCCTTGAAGCCTGGGCTG 5402
Query 73 ------------------------------------------------------------ 72
Sbjct 5403 GATTAGTGACTTGCTTCTAACCAACAGCATATGGCAAAAATAAATGTTTATTGTTTTAAA 5462
