Nucleotide Global Alignment
Description
- Query:
- TRCN0000492100
- Subject:
- XR_001740206.1
- Aligned Length:
- 4810
- Identities:
- 1673
- Gaps:
- 3136
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGCTCCGGCGAGGCGACCCTTGGGTCGGCGCTGCGGGCGAGGTGGGCAGGTAGGTGGGCGGACGGCCGCGGTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCGGCAAGCGCAGGCGGCGGAGTCCCCCACGGCGCCCGAAGCGCCCCCCCGCACCCCCGGCCTCCAGCGTTGA 148
Query 1 --------------------------------------------ATGTCCCACACGGTCGCAGGCGGCGGCAGC 30
||||||||||||||||||||||||||||||
Sbjct 149 GGCGGGGGAGTGAGGAGATGCCGACCCAGAGGGACAGCAGCACCATGTCCCACACGGTCGCAGGCGGCGGCAGC 222
Query 31 GGGGACCATTCCCACCAGGTCCGGGTGAAAGCCTACTACCGCGGGGATATCATGATAACACATTTTGAACCTTC 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGGGACCATTCCCACCAGGTCCGGGTGAAAGCCTACTACCGCGGGGATATCATGATAACACATTTTGAACCTTC 296
Query 105 CATCTCCTTTGAGGGCCTTTGCAATGAGGTTCGAGACATGTGTTCTTTTGACAACGAACAGCTCTTCACCATGA 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CATCTCCTTTGAGGGCCTTTGCAATGAGGTTCGAGACATGTGTTCTTTTGACAACGAACAGCTCTTCACCATGA 370
Query 179 AATGGATAGATGAGGAAGGAGACCCGTGTACAGTATCATCTCAGTTGGAGTTAGAAGAAGCCTTTAGACTTTAT 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AATGGATAGATGAGGAAGGAGACCCGTGTACAGTATCATCTCAGTTGGAGTTAGAAGAAGCCTTTAGACTTTAT 444
Query 253 GAGCTAAACAAGGATTCTGAACTCTTGATTCATGTGTTCCCTTGTGTACCAGAACGTCCTGGGATGCCTTGTCC 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAGCTAAACAAGGATTCTGAACTCTTGATTCATGTGTTCCCTTGTGTACCAGAACGTCCTGGGATGCCTTGTCC 518
Query 327 AGGAGAAGATAAATCCATCTACCGTAGAGGTGCACGCCGCTGGAGAAAGCTTTATTGTGCCAATGGCCACACTT 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGGAGAAGATAAATCCATCTACCGTAGAGGTGCACGCCGCTGGAGAAAGCTTTATTGTGCCAATGGCCACACTT 592
Query 401 TCCAAGCCAAGCGTTTCAACAGGCGTGCTCACTGTGCCATCTGCACAGACCGAATATGGGGACTTGGACGCCAA 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCCAAGCCAAGCGTTTCAACAGGCGTGCTCACTGTGCCATCTGCACAGACCGAATATGGGGACTTGGACGCCAA 666
Query 475 GGATATAAGTGCATCAACTGCAAACTCTTGGTTCATAAGAAGTGCCATAAACTCGTCACAATTGAATGTGGGCG 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGATATAAGTGCATCAACTGCAAACTCTTGGTTCATAAGAAGTGCCATAAACTCGTCACAATTGAATGTGGGCG 740
Query 549 GCATTCTTTGCCACAGGAACCAGTGATGCCCATGGATCAGTCATCCATGCATTCTGACCATGCACAGACAGTAA 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GCATTCTTTGCCACAGGAACCAGTGATGCCCATGGATCAGTCATCCATGCATTCTGACCATGCACAGACAGTAA 814
Query 623 TTCCATATAATCCTTCAAGTCATGAGAGTTTGGATCAAGTTGGTGAAGAAAAAGAGGCAATGAACACCAGGGAA 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTCCATATAATCCTTCAAGTCATGAGAGTTTGGATCAAGTTGGTGAAGAAAAAGAGGCAATGAACACCAGGGAA 888
Query 697 AGTGGCAAAGCTTCATCCAGTCTAGGTCTTCAGGATTTTGATTTGCTCCGGGTAATAGGAAGAGGAAGTTATGC 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGTGGCAAAGCTTCATCCAGTCTAGGTCTTCAGGATTTTGATTTGCTCCGGGTAATAGGAAGAGGAAGTTATGC 962
Query 771 CAAAGTACTGTTGGTTCGATTAAAAAAAACAGATCGTATTTATGCAATGAAAGTTGTGAAAAAAGAGCTTGTTA 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CAAAGTACTGTTGGTTCGATTAAAAAAAACAGATCGTATTTATGCAATGAAAGTTGTGAAAAAAGAGCTTGTTA 1036
Query 845 ATGATGATGAGGATATTGATTGGGTACAGACAGAGAAGCATGTGTTTGAGCAGGCATCCAATCATCCTTTCCTT 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATGATGATGAGGATATTGATTGGGTACAGACAGAGAAGCATGTGTTTGAGCAGGCATCCAATCATCCTTTCCTT 1110
Query 919 GTTGGGCTGCATTCTTGCTTTCAGACAGAAAGCAGATTGTTCTTTGTTATAGAGTATGTAAATGGAGGAGACCT 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTTGGGCTGCATTCTTGCTTTCAGACAGAAAGCAGATTGTTCTTTGTTATAGAGTATGTAAATGGAGGAGACCT 1184
Query 993 AATGTTTCATATGCAGCGACAAAGAAAACTTCCTGAAGAACATGCCAGATTTTACTCTGCAGAAATCAGTCTAG 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AATGTTTCATATGCAGCGACAAAGAAAACTTCCTGAAGAACATGCCAGATTTTACTCTGCAGAAATCAGTCTAG 1258
Query 1067 CATTAAATTATCTTCATGAGCGAGGGATAATTTATAGAGATTTGAAACTGGACAATGTATTACTGGACTCTGAA 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CATTAAATTATCTTCATGAGCGAGGGATAATTTATAGAGATTTGAAACTGGACAATGTATTACTGGACTCTGAA 1332
Query 1141 GGCCACATTAAACTCACTGACTACGGCATGTGTAAGGAAGGATTACGGCCAGGAGATACAACCAGCACTTTCTG 1214
|||||||||||||||||||||||||||||||||||
Sbjct 1333 GGCCACATTAAACTCACTGACTACGGCATGTGTAA--------------------------------------- 1367
Query 1215 TGGTACTCCTAATTACATTGCTCCTGAAATTTTAAGAGGAGAAGATTATGGTTTCAGTGTTGACTGGTGGGCTC 1288
|||||||||||||||||||||||||
Sbjct 1368 -------------------------------------------------GGTTTCAGTGTTGACTGGTGGGCTC 1392
Query 1289 TTGGAGTGCTCATGTTTGAGATGATGGCAGGAAGGTCTCCATTTGATATTGTTGGGAGCTCCGATAACCCTGAC 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1393 TTGGAGTGCTCATGTTTGAGATGATGGCAGGAAGGTCTCCATTTGATATTGTTGGGAGCTCCGATAACCCTGAC 1466
Query 1363 CAGAACACAGAGGATTATCTCTTCCAAGTTATTTTGGAAAAACAAATTCGCATACCACGTTCTCTGTCTGTAAA 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1467 CAGAACACAGAGGATTATCTCTTCCAAGTTATTTTGGAAAAACAAATTCGCATACCACGTTCTCTGTCTGTAAA 1540
Query 1437 AGCTGCAAGTGTTCTGAAGAGTTTTCTTAATAAGGACCCTAAGGAACGATTGGGTTGTCATCCTCAAACAGGAT 1510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1541 AGCTGCAAGTGTTCTGAAGAGTTTTCTTAATAAGGACCCTAAGGAACGATTGGGTTGTCATCCTCAAACAGGAT 1614
Query 1511 TTGCTGATATTCAGGGACACCCGTTCTTCCGAAATGTTGATTGGGATATGATGGAGCAAAAACAGGTGGTACCT 1584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1615 TTGCTGATATTCAGGGACACCCGTTCTTCCGAAATGTTGATTGGGATATGATGGAGCAAAAACAGGTGGTACCT 1688
Query 1585 CCCTTTAAACCAAATATTTCTGGGGAATTTGGTTTGGACAACTTTGATTCTCAGTTTACTAATGAACCTGTCCA 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1689 CCCTTTAAACCAAATATTTCTGGGGAATTTGGTTTGGACAACTTTGATTCTCAGTTTACTAATGAACCTGTCCA 1762
Query 1659 GCTCACTCCAGATGACGATGACATTGTGAGGAAGATTGATCAGTCTGAATTTGAAGGTTTTGAGTATATCAATC 1732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1763 GCTCACTCCAGATGACGATGACATTGTGAGGAAGATTGATCAGTCTGAATTTGAAGGTTTTGAGTATATCAATC 1836
Query 1733 CTCTTTTGATGTCTGCAGAAGAATGTGTCG-------------------------------------------- 1762
|||||||||||||||||||||||||||||.
Sbjct 1837 CTCTTTTGATGTCTGCAGAAGAATGTGTCTGATCCTCATTTTTCAACCATGTATTCTACTCATGTTGCCATTTA 1910
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 1911 ATGCATGGATAAACTTGCTGCAAGCCTGGATACAATTAACCATTTTATATTTGCCACCTACAAAAAAACACCCA 1984
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 1985 ATATCTTCTCTTGTAGACTATATGAATCAATTATTACATCTGTTTTACTATGAAAAAAAAATTAATACTACTAG 2058
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 2059 CTTCCAGACAATCATGTCAAAATTTAGTTGAACTGGTTTTTCAGTTTTTAAAAGGCCTACAGATGAGTAATGAA 2132
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 2133 GTTATCTTTTTTGTTTAAAAAAAAAAAAAACACTGCATTAAAAAAGTATCTGTTGCATTAAGGCACATAGTGGG 2206
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 2207 ATTACATCATAAACCTCCCATAATTTTTGTCATTCTGTGTTAAATCATTTCAGGGTTTAATTTTGAAATAAAAG 2280
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 2281 ATTAATATAAAATGCAACAACTTTTTATATTACCTATTAGTTTTGGAGTTCTTTATGTTTAAAAATTCAGGTGT 2354
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 2355 AAATTTTATTGCCTTGGATAAATAAATTATTGATCTTTTTTAAGGCAGCAGTTATTAAATTGGTAATAGAAGAT 2428
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 2429 GCTGCTTGCTTAGAATTGGGAAATTCGGCTGGGTGCAGTGACTCAATGCCTGTGATCCCAGTACTTTGGGAGGT 2502
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 2503 TGAGGCGGGCAGATCACTTGAGGTCAGGAGTTTGAGATTGGCCTGGTCAACATGGTGAAATCCTGTCTCTACTA 2576
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 2577 AAAATACAAAAATTAGCTGGGCATGGTGGCACATACCTGTAATCCCAGCTACTCGGGAGGCTGAAACAGGAGAA 2650
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 2651 TCGCTTGAACCCAGGAGATGGAGTTGGCAGTGAGCCAAGATTAGCCTGGGCAACAGTGAGTGAGACTCGGTCTC 2724
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 2725 AAACAAAAACCAAATTGGGAAATTCTTCTTGAGTTAAAAAAGACACTTTTTATTATGAATCAGATTCCAAATCA 2798
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 2799 TTAACTATTTTTGCAAAACTGGCACAAGTGGTTTTTCTTTTTAAGTATATTAACAGGGTAGCTCCTGAGCCTTT 2872
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 2873 CCCTTTATTGGAAACTTTAACTGCAGTGTTAATATATACACTGCAAAAGACCAAGGATGCAGTTGAATGGAAAA 2946
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 2947 TTACTCAGTGTATAGAAAGGAAAAAAACCAGAAATTTAAAATAGATACAGAAAAGTACACTGGTAATATTTTTA 3020
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 3021 TTTCCTATTGGAGAGTGAATCCCCACAGTTGCTTTTTGTGACTTGATTCAAATGAGGCACTCATTATTGTTACC 3094
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 3095 AAACTTGTAAAAGCATTCCATGTATTCAGTGGAGGCAGAATGTATAATATTTTTTCCTTATAATTTAGCATACA 3168
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 3169 GGAAAAGTATTTATTTTTTAAGTAGGGTATCTTAATTATGCTCATTTCTTCCCCTAAACCACATTATCTATATG 3242
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 3243 ATTGGACCCTTTAGTGAAATCAGAAAAATAAAGTAGGCATGAATAAATGTTCAGGACACACACATACACTCACA 3316
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 3317 CACATCACAGTATCAGCTCTTTCAGTGAGTTTTTATTAACTAGATAACACATGTAATACATAGTAGAATACATT 3390
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 3391 TCAGAGGCAGAGTTCCTCGGATTATTTTTTATGGATATTAGTGTTCAGCAGCTTATTATTTAAAGGGGTGCCAA 3464
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 3465 ATATAGCATCCTTCTGTTGTTTATTTTAAATATATTTTTAATGAAAAGGGACTTAAAAAGTAAACATGATTATC 3538
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 3539 TAAATTACTTAAAATTTTTTAATCTTAGTAAAAATTTTAGGAAAGTTATCTAGTTTAAATTTCAAATGTTTTAA 3612
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 3613 AATTTGTAGGCATTTAATAAATTATCTTTTTTTGGAGGGGTGGATGCTGCATTTCATTGGAAATGTCATTTTTC 3686
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 3687 CAAAGTTTCTAGCTATATACTCTCTTTCCTTCAAATAACATAAGTCTGAAAGCAATGAAAACGTCAAAGGAAAA 3760
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 3761 TGTTTATATACATCCACATGTTTATTTAATATGTTTCTCTTAACACCTGAAACTTGTTTTAAAACAAAAAGCAG 3834
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 3835 TATTCACTTCAAATCATAAACTTAGAATTCTGTATCTCATGTCAGAAATATGTTTATGGCCTTGCTTTTAAGTG 3908
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 3909 GTGCTGTTTCCCATAGGGCATTAGTTCTCAGATTTTGGAATGTGAAATAATCACCTAGGAAGTTGGTTTAAAAT 3982
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 3983 GCACACTAGTGAGCCCACCTTAGACTTCTTTTGGGGCCTTCGACCTCACTTTGAGAAATACCTTCTTCAGGTTA 4056
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 4057 TTCTTTATGTTTGTCCTGTGGTTAAATATTAGAGTATTCATGATAAAACATTTTGAGAAGGGGTAAGCAGTGAG 4130
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 4131 TTATTACCCACAATTTAAAGCAAATTTTGAATGAATCTTTAAGTTAGGTATCTACCTTCCCACCAGCCCCCCAA 4204
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 4205 AAAACCTCTCAGTAGTTTCTTTCAGTGTACAAAATGATGAGCATTTTTCTATGATGAGGTTTTAACCATTATTC 4278
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 4279 AGGGTGGTCTTTTGTTTTTAAATCTTTTTTTAACTAATAAGATTTACGGTGTGTATTTTATACAGAAATGCATT 4352
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 4353 ATAAATGTTTTTAATTGTGTTCTGTTTTTTGCAGTCTTTAAGTGCCATGCCAATTGTTCTTATATTCTATAGAA 4426
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 4427 GTTCGCTCAAAATACTCAACAGGGGAATAGGCAGCGGACAGTCAGAATGGTTGGAATTTTGGCTTTCTAAGAAA 4500
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 4501 AACTTTATTTTGCATAAGCATGTGGTCAGATCATTTTGTGCATATGCAGCCTGGATTGGATGTTAAGTAAATGC 4574
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 4575 TTGTTCAGTGCCGGTACATTTACTTAAATCTGTTTTTATTTTTGTCATGTAGAATACTACTGTGGTCATCATAA 4648
Query 1763 -------------------------------------------------------------------------- 1762
Sbjct 4649 TGTAATCTATTTCTGTACCTTTTTTTTTTTTTTTTACTTTGAAGTCTTTAAATAAAATGTATAATACCCATTGA 4722
