Nucleotide Global Alignment

Description

Query:
TRCN0000492103
Subject:
XM_006512526.3
Aligned Length:
1849
Identities:
1606
Gaps:
41

Alignment

Query    1  ATGGAAGACTCCCAGGATTTAAATGAACAATCAGTAAAGAAAACGTGCACAGAATCAGATGTTTCACAATCTCA  74
            |||||||                      .||||   |||||||   .||.||..||..|.||||..|..||  
Sbjct    1  ATGGAAG----------------------TTCAG---AGAAAAC---TACGGATACAAGTTTTTCTGATGCT--  44

Query   75  GAATTCCAGGTCTATGGAAATGCAGGACCTAGCAAGTCCTCATACTCTT-GTTGGAGGTGGTGATACTCCAGGT  147
                     |||||||||||||||.||||||||||||||.|||.| ||| ||||||||..|||||||.||.||.
Sbjct   45  ---------GTCTATGGAAATGCAAGACCTAGCAAGTCCCCATGC-CTTGGTTGGAGGCAGTGATACACCTGGG  108

Query  148  AGCTCCAAACTGGAAAAATCTAATCTCAGCAGCACATCAGTTACTACAAATGGGACAGGAGTGTCTCTTCTTGC  221
            ||||||||.|||||.||||||..||||||||||||.|||||.||.|||||||||||||||||||||||||||||
Sbjct  109  AGCTCCAAGCTGGATAAATCTGGTCTCAGCAGCACTTCAGTCACAACAAATGGGACAGGAGTGTCTCTTCTTGC  182

Query  222  AGTCAAAACAGAGCCCTTGAACAGCAGTGAAACCACAGCCACGACTGGAGATGGAGCGCTTGACACTTTTACTG  295
            |||||||||||||||||||.||||||||||..||||..||||||||||||||||||||||||||||||||||||
Sbjct  183  AGTCAAAACAGAGCCCTTGCACAGCAGTGAGTCCACTACCACGACTGGAGATGGAGCGCTTGACACTTTTACTG  256

Query  296  GGTCAGTAATTACAAGTAGTGGCTACAGCCCCAGATCAGCACATCAGTATTCCCCACAGCTGTATCCTTCCAAG  369
            ||||||||||.|||||.||.||||||||||||||.||.||.||.|||||.||.|||||||||||.||.||||||
Sbjct  257  GGTCAGTAATAACAAGCAGCGGCTACAGCCCCAGGTCGGCGCAGCAGTACTCTCCACAGCTGTACCCCTCCAAG  330

Query  370  CCCTATCCACACATTCTTTCTACACCAGCAGCTCAAACAATGTCTGCCTATGCAGGCCAGACTCAGTATTCGGG  443
            ||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.||.||
Sbjct  331  CCCTATCCACACATTCTTTCTACACCAGCAGCTCAAACAATGTCGGCCTATGCAGGCCAGACTCAGTACTCTGG  404

Query  444  GATGCAGCAGCCAGCCGTCTACACAGCCTACTCACAGACAGGACAGCCCTACAGCTTGCCCACTTACGATTTGG  517
            ||||||||||||.||||||||||||||||||||.|||||||||||||||||||||.||||..|.||||||.|.|
Sbjct  405  GATGCAGCAGCCGGCCGTCTACACAGCCTACTCGCAGACAGGACAGCCCTACAGCCTGCCTGCCTACGATCTTG  478

Query  518  GTGTGATGTTGCCAGCCATCAAGACAGAGAGTGGACTTTCCCAAACTCAGTCCCCATTACAGAGTGGCTGCCTC  591
            |||||||||||||||||||||||||.||.|||||.||||||||||||||||||||.|||||||||||||||||.
Sbjct  479  GTGTGATGTTGCCAGCCATCAAGACGGAAAGTGGGCTTTCCCAAACTCAGTCCCCGTTACAGAGTGGCTGCCTG  552

Query  592  AGTTACAGCCCAGGGTTCTCTACCCCACAGCCAGGCCAGACACCTTATTCTTACCAAATGCCAGGTTCTAGTTT  665
            ||.||||||||.|||||.|||||||||||||||||||||||.|||||.||||||||||||||||||||.||.||
Sbjct  553  AGCTACAGCCCTGGGTTTTCTACCCCACAGCCAGGCCAGACGCCTTACTCTTACCAAATGCCAGGTTCCAGCTT  626

Query  666  TGCACCATCATCTACTATTTATGCAAATAATTCAGTTTCCAATTCAACAAATTTCAGTGGTTCACAACAGGATT  739
            |||||||||.|||||||||||||||||||||||.|||||.|||||||||||.|||||..|.|||||.|||||||
Sbjct  627  TGCACCATCGTCTACTATTTATGCAAATAATTCCGTTTCTAATTCAACAAACTTCAGCAGCTCACAGCAGGATT  700

Query  740  ATCCATCCTATACAGCCTTTGGCCAAAACCAGTATGCACAGTATTATTCAGCATCAACGTATGGAGCGTATATG  813
            |.||||||||.||||||||||||||||||||.|||||.||||||||.|||||||||||.|||||.||.||.|||
Sbjct  701  ACCCATCCTACACAGCCTTTGGCCAAAACCAATATGCTCAGTATTACTCAGCATCAACCTATGGGGCATACATG  774

Query  814  ACATCGAATAACACAGCCGATGGCACACCCTCTTCAACCTCTACTTATCAGTTGCAGGAATCTCTCCCAGGACT  887
            |||||.||.||||||||.||.||||||.|.||.|||||.||.|||||||||.|||||||||||||||.||||||
Sbjct  775  ACATCAAACAACACAGCTGACGGCACATCATCGTCAACATCAACTTATCAGCTGCAGGAATCTCTCCAAGGACT  848

Query  888  GACTAACCAACCAGGAGAGTTCGATACCATGCAGAGTCCCTCCACACCCATCAAAGATCTTGATGAGAGAACCT  961
            |||||.|||||||||||||||.|||||..|||||||||||||||||||.|||||||||||.|||||.|||||.|
Sbjct  849  GACTAGCCAACCAGGAGAGTTTGATACAGTGCAGAGTCCCTCCACACCAATCAAAGATCTCGATGACAGAACAT  922

Query  962  GTAGGAGTTCTGGGTCAAAGTCCAGAGGAAGAGGCCGGAAAAATAATCCCTCCCCGCCTCCTGATAGTGACCTG  1035
            ||||.|||||||||||||||||..|||||||||||||||||||||||||||||||.|||||.||.||||||||.
Sbjct  923  GTAGAAGTTCTGGGTCAAAGTCTCGAGGAAGAGGCCGGAAAAATAATCCCTCCCCACCTCCGGACAGTGACCTA  996

Query 1036  GAGCGTGTGTTTGTCTGGGATTTGGATGAAACCATCATTGTTTTTCACTCACTGCTCACCGGGTCTTATGCACA  1109
            ||||||||||||||||||||.|||||||||||||||||.||.||.|||||.||.|||||.||.|||||||||||
Sbjct  997  GAGCGTGTGTTTGTCTGGGACTTGGATGAAACCATCATCGTCTTCCACTCTCTCCTCACGGGCTCTTATGCACA  1070

Query 1110  GAAGTATGGCAAGGATCCCCCCATGGCTGTAACCCTTGGACTCCGCATGGAAGAAATGATTTTTAATCTTGCTG  1183
            |||||||||||||||||||||.||||||||.||.||.||.|||||.||||||||||||||.|||||||||||.|
Sbjct 1071  GAAGTATGGCAAGGATCCCCCAATGGCTGTGACTCTCGGGCTCCGGATGGAAGAAATGATCTTTAATCTTGCAG  1144

Query 1184  ATACTCATTTGTTTTTTAATGATTTAGAGGAGTGTGATCAAGTTCATATAGATGATGTTTCCTCTGATGATAAT  1257
            ||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||.||.|||
Sbjct 1145  ATACACATTTGTTTTTTAATGACTTAGAGGAGTGTGATCAAGTTCATATAGATGATGTTTCCTCCGACGACAAT  1218

Query 1258  GGGCAGGACTTAAGTACCTACAGTTTTGCAACTGATGGCTTCCATGCAGCTGCAAGTAGTGCAAACCTTTGTTT  1331
            ||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 1219  GGTCAGGACTTAAGTACCTACAGTTTTGCAACTGATGGCTTCCATGCAGCTGCAAGTAGTGCGAACCTTTGTTT  1292

Query 1332  GCCAACAGGTGTAAGAGGAGGGGTTGACTGGATGAGGAAGTTGGCTTTTCGTTACAGAAGAGTAAAAGAATTAT  1405
            ||||||||||||.||||||||.||.|||||||||||||||.|||||||||||||||||||||||||.|||||||
Sbjct 1293  GCCAACAGGTGTGAGAGGAGGAGTGGACTGGATGAGGAAGCTGGCTTTTCGTTACAGAAGAGTAAAGGAATTAT  1366

Query 1406  ATAACACCTACAAGAACAACGTTGGAGGACTCCTTGGCCCTGCCAAGAGGGATGCCTGGCTACAGTTAAGGGCA  1479
            |||||||||||||||||||.|||||||||||||||||||||||.|||||||||||.|||||.||||||||||||
Sbjct 1367  ATAACACCTACAAGAACAATGTTGGAGGACTCCTTGGCCCTGCTAAGAGGGATGCATGGCTGCAGTTAAGGGCA  1440

Query 1480  GAGATTGAAGGTCTGACAGATTCCTGGCTAACAAATGCACTTAAGTCTTTATCAATTATTAGCACTAGGAGTAA  1553
            |||||.|||||.||.|||||||||||||||||.|||||||||||||||||||||||||||||.|||||||||||
Sbjct 1441  GAGATCGAAGGCCTAACAGATTCCTGGCTAACGAATGCACTTAAGTCTTTATCAATTATTAGTACTAGGAGTAA  1514

Query 1554  CTGCATAAATGTCTTGGTAACGACAACTCAACTGATCCCAGCACTTGCGAAGGTTCTACTCTATAGTTTAGGAG  1627
            |||..||||||||||||||||||||||.||.|||||.||.||.|||||.||.||.||.|||||.||..||||||
Sbjct 1515  CTGTGTAAATGTCTTGGTAACGACAACCCAGCTGATTCCTGCTCTTGCAAAAGTCCTGCTCTACAGCCTAGGAG  1588

Query 1628  GTGCTTTCCCCATTGAGAATATTTACAGTGCAACTAAAATAGGAAAAGAAAGTTGCTTTGAACGAATAATGCAA  1701
            |||||||||||||||||||.||||||||.|||||.||||||||.||.|||||.||.|||||.||.|||.||...
Sbjct 1589  GTGCTTTCCCCATTGAGAACATTTACAGCGCAACGAAAATAGGCAAGGAAAGCTGTTTTGAGCGTATAGTGTCC  1662

Query 1702  AGGTTTGGCAGAAAAGTAGTGTATGTTGTAATTGGGGATGGTGTAGAAGAAGAACAGGCAGCAAAAAAGCACAA  1775
            ||.|||||||..||..||...||||||||.|||||.|||||....||.||.||.||.||.||.||..|||||||
Sbjct 1663  AGATTTGGCACTAACATAACTTATGTTGTGATTGGAGATGGCCGGGATGAGGAGCACGCTGCTAACCAGCACAA  1736

Query 1776  CATGCCCTTCTGGAGGATATCCAGTCACTCAGACCTCCTGGCTCTCCACCAAGCACTGGAATTAGAGTATTTG  1848
            |||||||||.|||||||||||.||.|||||.||||||.|||||||.||.||||||||||||||||||||||||
Sbjct 1737  CATGCCCTTTTGGAGGATATCAAGCCACTCGGACCTCTTGGCTCTACATCAAGCACTGGAATTAGAGTATTTG  1809

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