Nucleotide Global Alignment
Description
- Query:
- TRCN0000492123
- Subject:
- XM_011241042.2
- Aligned Length:
- 4164
- Identities:
- 1102
- Gaps:
- 2935
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGGCTCCCACCGTGCTGGCACCTGGCATTCTGGTGCTGCTGTTGTCCTTGGTGCAGAGGAGCCATGGGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGCAAGGAGGCCCTAGTGAAGTCTGAGATGAACGTGAACATGAAGTATCAGCTCCCCAACTTCACGGCAGAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCCCATCCAGAATGTCGTCCTACACGGCCATCATATTTATCTCGGAGCCACAAACTACATTTATGTTTTAAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GACAAAGACCTTCAGAAGGTATCCGAATTCAAGACCGGGCCCGTGTTGGAACACCCAGATTGTTTACCTTGTCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGACTGCAGCAGCAAAGCCAATTCATCAGGAGGGGTTTGGAAAGACAACATCAACATGGCTCTGCTTGTTGACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CATACTATGATGATCAACTCATTAGCTGTGGCAGTGTCAACAGAGGGACTTGCCAGCGGCATGTCCTTCCTCCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GACAATTCTGCTGACATCCAGTCTGAGGTCCACTGCATGTTCTCCCCAGAAGAGGAGTCAGGGCAGTGTCCTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTGTGTAGTGAGTGCCCTCGGAGCCAAAGTCCTCCTGTCGGAAAAGGACCGGTTCATCAATTTCTTTGTGGGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATACGATCAATTCCTCCTATCCTCCTGGTTATTCACTGCATTCGATATCGGTGAGACGGCTGAAGGAAACCCAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATGGTTTTAAGTTTTTGACAGACCAGTCCTATATTGATGTCTTACCAGAATTCCAAGATTCCTACCCCATAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTACATACATGCCTTCGAAAGCAACCATTTTATTTACTTTCTGACTGTCCAAAAGGAAACTCTAGATGCTCAGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTTTTCATACAAGAATAATCAGGTTCTGTTCCGTAGACTCTGGGTTGCACTCCTACATGGAAATGCCCCTGGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGCATCCTGACAGAAAAAAGAAGGAAGAGATCCACAAGGGAAGAAGTGTTTAATATCCTCCAAGCCGCGTATGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAGTAAACCAGGGGCCAATCTTGCTAAGCAAATAGGAGCTAGCCCTTCTGATGACATTCTCTTCGGGGTGTTTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CACAAAGCAAGCCAGATTCTGCTGAACCTGTGAATCGATCAGCAGTCTGTGCATTCCCCATCAAATATGTCAAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACTTCTTCAACAAGATTGTCAACAAAAACAACGTGAGATGTCTCCAGCATTTTTACGGACCCAACCATGAGCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTGTTTCAATAGGACCCTGCTGAGAAACTCTTCCGGCTGTGAAGCGCGCAGTGACGAGTATCGGACAGAGTTTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCACGGCTTTGCAGCGCGTCGACTTATTCATGGGCCGGCTTAACCAAGTGCTCCTGACATCCATCTCCACCTTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATCAAAGGTGACCTCACCATTGCTAATCTAGGGACGTCAGAAGGTCGCTTCATGCAGGTGGTGCTCTCTCGAAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGCACACCTCACTCCTCATGTGAACTTCCTCCTGGACTCCCATCCTGTATCTCCAGAAGTTATTGTTGAGCATC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CATCAAATCAAAATGGCTATACATTGGTTGTCACAGGAAAGAAGATCACCAAGATTCCATTGAATGGCCTGGGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGTGGACATTTCCAATCCTGCAGTCAGTGCCTCTCTGCCCCTTACTTTATACAGTGTGGCTGGTGCCACAATCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATGTGTGCGTTTTGATGAATGCCCCAGCGGTACATGGACTCAAGAGATCTGTCTGCCGGCGGTTTATAAGGTGT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCCCCACCAGCGCGCCCCTTGAAGGAGGAACAGTGTTGACCATATGTGGCTGGGACTTTGGATTCAGGAAGAAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AATAAATTTGATTTAAGGAAAACCAAAGTTCTGCTTGGCAACGAGAGCTGTACCTTGACCTTAAGCGAGAGCAC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GACAAATACGTTGAAATGCACAGTTGGTCCCGCGATGAGTGAGCACTTCAATGTGTCTGTAATTATCTCAAACA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTCGAGAGACGACGCAATACAGTGCATTCTCCTATGTAGATCCTGTAATAACAAGCATTTCTCCGAGGTACGGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCTCAGGCTGGAGGCACCTTACTCACTCTTACTGGGAAATACCTCAACAGTGGCAATTCTAGACACATTTCAAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGGAGGGAAAACATGTACTTTAAAAAGTGTATCAGATAGTATTCTTGAATGCTACACCCCAGCCCAAACTACCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTGATGAGTTTCCTGTGAAATTGAAGATTGACTTGGCTAACCGAGAGACCAGCAGCTTCAGTTACCGGGAAGAC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCCGTTGTCTATGAAATCCACCCGACCAAATCTTTTATTAGTGGTGGAAGCACAATAACGGGTATTGGGAAGAC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCTGAACTCGGTTAGCCTCCCAAAGCTGGTAATAGATGTGCATGAAGTGGGTGTGAACTACACAGTGGCATGTC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGCATCGCTCAAATTCAGAGATCATCTGCTGCACTACTCCTTCACTGAAACAGCTGGGCCTGCAACTCCCCCTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AAGACCAAAGCCTTCTTCCTGTTAGACGGGATTCTTTCCAAACACTTTGATCTCACTTATGTGCATAATCCTGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTTTGAGCCTTTTGAAAAGCCAGTAATGATCTCAATAGGCAATGAAAATGTAGTGGAAATTAAGGGAAACAATA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TTGACCCTGAAGCAGTTAAAGGTGAAGTGTTAAAAGTTGGAAATCAGAGCTGCGAGAGTCTCCACTGGCACTCT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GGAGCTGTGTTGTGTACAGTCCCCAGTGACCTGCTCAAACTGAACAGCGAGCTAAATATAGAGTGGAAGCAAGC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AGTCTCTTCAACTGTTCTTGGAAAAGTGATCGTTCAACCGGATCAGAATTTTGCAGGATTGATCATTGGTGCGG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TCTCAATATCAGTAGTAGTTTTGTTATTATCCGGGCTCTTCCTGTGGATGAGAAAGAGAAAGCATAAAGATCTG 2886
Query 1 ----------------------ATGCAAGAGTACACACTCCTCATTTGGATAGGCTTGTAAGTGCCCGAAGTGT 52
|.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 GGCAGTGAATTAGTTCGCTATGACGCAAGAGTACACACTCCTCATTTGGATAGGCTTGTAAGTGCCCGAAGTGT 2960
Query 53 AAGCCCAACTACAGAAATGGTTTCAAATGAATCTGTAGACTACCGAGCTACTTTTCCAGAAGATCAGTTTCCTA 126
|||.|||||||||||.||||||||||||||.||||||||||||.|||||||||||||||||||.||||||||.|
Sbjct 2961 AAGTCCAACTACAGAGATGGTTTCAAATGAGTCTGTAGACTACAGAGCTACTTTTCCAGAAGACCAGTTTCCCA 3034
Query 127 ATTCATCTCAGAACGGTTCATGCCGACAAGTGCAGTATCCTCTGACAGACATGTCCCCCATCCTAACTAGTGGG 200
|.||.||||||||.||..|||||.||||||||||.||.||||||||||||.|||||||.|||||.||.|||||.
Sbjct 3035 ACTCCTCTCAGAATGGAGCATGCAGACAAGTGCAATACCCTCTGACAGACCTGTCCCCTATCCTGACAAGTGGA 3108
Query 201 GACTCTGATATATCCAGTCCATTACTGCAAAATACTGTCCACATTGACCTCAGTGCTCTAAATCCAGAGCTGGT 274
|||||||||||||||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 3109 GACTCTGATATATCCAGCCCATTACTACAAAATACTGTTCACATTGACCTCAGTGCTCTAAATCCAGAGCTGGT 3182
Query 275 CCAGGCAGTGCAGCATGTAGTGATTGGGCCCAGTAGCCTGATTGTGCATTTCAATGAAGTCATAGGAAGAGGGC 348
|||.|||||.|||||.|||||||||||.|||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 CCAAGCAGTTCAGCACGTAGTGATTGGACCCAGCAGCCTGATTGTGCATTTCAATGAAGTCATAGGAAGAGGGC 3256
Query 349 ATTTTGGTTGTGTATATCATGGGACTTTGTTGGACAATGATGGCAAGAAAATTCACTGTGCTGTGAAATCCTTG 422
|||||||.|||||.|||||||||||||||.||||||||||.||.|||||||||||||||||||||||||||||.
Sbjct 3257 ATTTTGGCTGTGTCTATCATGGGACTTTGCTGGACAATGACGGAAAGAAAATTCACTGTGCTGTGAAATCCTTA 3330
Query 423 AACAGAATCACTGACATAGGAGAAGTTTCCCAATTTCTGACCGAGGGAATCATCATGAAAGATTTTAGTCATCC 496
||.||||||||.||.||||.|||.||.|||||.||||||||.||||||||||||||||||||.||.||.|||||
Sbjct 3331 AATAGAATCACAGATATAGAAGAGGTCTCCCAGTTTCTGACTGAGGGAATCATCATGAAAGACTTCAGCCATCC 3404
Query 497 CAATGTCCTCTCGCTCCTGGGAATCTGCCTGCGAAGTGAAGGGTCTCCGCTGGTGGTCCTACCATACATGAAAC 570
||||||.|||||.|||.||||||||||||||.|.||||||||||||||.|||||||||||.||.||.|||||.|
Sbjct 3405 CAATGTTCTCTCACTCTTGGGAATCTGCCTGAGGAGTGAAGGGTCTCCTCTGGTGGTCCTGCCCTATATGAAGC 3478
Query 571 ATGGAGATCTTCGAAATTTCATTCGAAATGAGACTCATAATCCAACTGTAAAAGATCTTATTGGCTTTGGTCTT 644
||||||||||.|||||||||||||||||.||||||||||||||||||||.|||||||||||.||.|||||.|||
Sbjct 3479 ATGGAGATCTGCGAAATTTCATTCGAAACGAGACTCATAATCCAACTGTGAAAGATCTTATAGGATTTGGCCTT 3552
Query 645 CAAGTAGCCAAAGGCATGAAATATCTTGCAAGCAAAAAGTTTGTCCACAGAGACTTGGCTGCAAGAAACTGTAT 718
|||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||||||||||||||.||
Sbjct 3553 CAAGTAGCCAAAGGCATGAAATATCTTGCCAGCAAAAAGTTTGTCCACAGAGACTTAGCTGCAAGAAACTGCAT 3626
Query 719 GCTGGATGAAAAATTCACAGTCAAGGTTGCTGATTTTGGTCTTGCCAGAGACATGTATGATAAAGAATACTATA 792
|.||||||||||||||||.|||||||||||||||||.||||||||||||||||||||.||||||||.|||||||
Sbjct 3627 GTTGGATGAAAAATTCACTGTCAAGGTTGCTGATTTCGGTCTTGCCAGAGACATGTACGATAAAGAGTACTATA 3700
Query 793 GTGTACACAACAAAACAGGTGCAAAGCTGCCAGTGAAGTGGATGGCTTTGGAAAGTCTGCAAACTCAAAAGTTT 866
||||.||||||||.||.|||||.|||||.|||||.||||||||||||||.||.|||||||||||.||.|||||.
Sbjct 3701 GTGTCCACAACAAGACGGGTGCCAAGCTACCAGTAAAGTGGATGGCTTTAGAGAGTCTGCAAACGCAGAAGTTC 3774
Query 867 ACCACCAAGTCAGATGTGTGGTCCTTTGGCGTGCTCCTCTGGGAGCTGATGACAAGAGGAGCCCCACCTTATCC 940
|||||||||||||||||||||||||||||.|||||||||||||||||.|||||.|||||||||||.||||||||
Sbjct 3775 ACCACCAAGTCAGATGTGTGGTCCTTTGGTGTGCTCCTCTGGGAGCTCATGACGAGAGGAGCCCCTCCTTATCC 3848
Query 941 TGACGTAAACACCTTTGATATAACTGTTTACTTGTTGCAAGGGAGAAGACTCCTACAACCCGAATACTGCCCAG 1014
.|||||.|||||.||||||||.|||.|.|||.||||||||||.|||||||||.|.|||||.||||||||.||||
Sbjct 3849 CGACGTGAACACATTTGATATCACTATCTACCTGTTGCAAGGCAGAAGACTCTTGCAACCAGAATACTGTCCAG 3922
Query 1015 ACCCCTTATATGAAGTAATGCTAAAATGCTGGCACCCTAAAGCCGAAATGCGCCCATCCTTTTCTGAACTGGTG 1088
||.||||.||.|||||.||||||||||||||||||||.|||||.|||||||||||.||||||||.||||||||.
Sbjct 3923 ACGCCTTGTACGAAGTGATGCTAAAATGCTGGCACCCCAAAGCGGAAATGCGCCCGTCCTTTTCCGAACTGGTC 3996
Query 1089 TCCCGGATATCAGCGATCTTCTCTACTTTCATTGGGGAGCACTATGTCCATGTGAACGCTACTTATGTGAACGT 1162
|||.|||||||..|.||||||||.||.|||||||||||.|||||.|||||.||||||||||||||||||||.||
Sbjct 3997 TCCAGGATATCCTCAATCTTCTCCACGTTCATTGGGGAACACTACGTCCACGTGAACGCTACTTATGTGAATGT 4070
Query 1163 AAAATGTGTCGCTCCGTATCCTTCTCTGTTGTCATCAGAAGATAACGCTGATGATGAGGTGGACACACGACCAG 1236
|||||||||.|||||.|||||||||||||||.||||..||||.|||..|||||..||||.|.|||||
Sbjct 4071 AAAATGTGTTGCTCCATATCCTTCTCTGTTGCCATCCCAAGACAACATTGATGGCGAGGGGAACACA------- 4137
Query 1237 CCTCCTTCTGGGAGACATCA 1256
Sbjct 4138 -------------------- 4137
