Nucleotide Global Alignment
Description
- Query:
- TRCN0000492269
- Subject:
- XR_946744.2
- Aligned Length:
- 1779
- Identities:
- 965
- Gaps:
- 758
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCGCCGCTGCGTCCCCACTATGGCGGCGCCCATGCAGCCCAGCGCGTTGTGGGCTCCCGCCGGGGTCCCCCGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTGTCGCCGCCGCCTACGCCGCTGCCTCCGCCTTCCTGCCCCGCGTCGGGCCGGGCGCCACCTCCCCCCTGCC 148
Query 1 ---------------------------------------------ATGGGACTCTTGGTATTTGTGCGCAATCT 29
|||||||||||||||||||||||||||||
Sbjct 149 TCCCTCTCCGCTGTGGTCATTTAGGAAATCGTAAATCATGTGAAGATGGGACTCTTGGTATTTGTGCGCAATCT 222
Query 30 GCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTATTCTGCGTGGAAGCTACACTTACTCCAGT 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTATTCTGCGTGGAAGCTACACTTACTCCAGT 296
Query 104 GGGAGGAGGACTCCA---------------------------------------------ATTCAGTGGTTCTT 132
||||||||||||||| ||||||||||||||
Sbjct 297 GGGAGGAGGACTCCAGTAAGTATAGTCACTCTAGCTCACCCCAGGAGAAGCCTGTTGCAGATTCAGTGGTTCTT 370
Query 133 TCCTTTGACTCCGCTGGACAAACACTAGGCTCAGAGTATGATCGGTTGGGCTTCCTCCTGAATCTGGACTCTAA 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCCTTTGACTCCGCTGGACAAACACTAGGCTCAGAGTATGATCGGTTGGGCTTCCTCCTGAATCTGGACTCTAA 444
Query 207 ACT----------------------------------------------------------------------- 209
|||
Sbjct 445 ACTCTCACCGAGGACTCTCTGCACGGTGGTTTTTGGCCTTGACTGCATATTGGAATCACCTGGAGAGCCTAAAA 518
Query 210 -------------------------------------------------------------------------- 209
Sbjct 519 AATTACTGATGCCTGCATCCCACCCTCTAGAGATTTTGAAGTCACTGAGCGAGGACACAGCCTTTGCATTAGGA 592
Query 210 -----------------GCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCCTGG 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTTTTAAAGCTGCCCAGGCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCCTGG 666
Query 267 CTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCT 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCT 740
Query 341 TTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCC 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCC 814
Query 415 ATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCTGCATCATCGT 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCTGCATCATCGT 888
Query 489 GGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATTGTGGTGAGACTGA 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATTGTGGTGAGACTGA 962
Query 563 ATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGC 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGC 1036
Query 637 GCCATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAA 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GCCATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAA 1110
Query 711 GTGGTTGAAATACATCGTCTACAAGGAGAGAGTG--------------------AGTGCA------------TC 752
|||||||||||||||||||||||||||||||||| |||.|| |.
Sbjct 1111 GTGGTTGAAATACATCGTCTACAAGGAGAGAGTGCTCTTTCCCAAGCAAGGCCAAGTACAGGCAGTGTCAAGTA 1184
Query 753 GGATGGC-------------------------TTCTGGAAATCTGTGGCCACTC---GAGTGCCCAAGG----- 793
|| |.|| .||..||||| || |||| ||||
Sbjct 1185 GG-TAGCAAGCAAGAGAGAAGACAGAAGTCAGGTCCAGAAAT----------TCAGGGAGT----AAGGAAAGA 1243
Query 794 -----------------AGCCCCCTGAGATTC---GAATCCTCA----ACCCA---TA---------------- 824
||||..|| |||.|| ||| |||| ||.|| ||
Sbjct 1244 AAGAAGAAAAGGAAGGAAGCCAGCT-AGAGTCGGAGAA--CTCACTATACTCAGGCTACTCAGGAAGCAGACAG 1314
Query 825 ------------TTTCATCCAGGAGG------------CCGCCTTCACCCTCATTGGCCTGCCCTTCAACAATG 874
|||| ||||||.| ||||| |||||||.||||
Sbjct 1315 CAGGGCCTTGCTTTTC--CCAGGAAGCTGAGGAGCTCTCCGCC-----------TGGCCTGGCCTT-------- 1367
Query 875 GCCTCATGGGCCGGGGGAACAT---------------------CCCTAC----CCTTGGCAGTGT--GGCAGT- 920
|||.|..||.|.|| |.|||| |.|||| ||||| .|||||
Sbjct 1368 --------GGCAGCAGGCAGATTCAAGTTTTATGTTTCAGTTACTCTACTGGGCTTTGG-AGTGTTCAGCAGTC 1432
Query 921 -----GAC----------CATGG-----CACTACA------CGG----------------------CTGTGACG 946
||| .|||| ||.||.| |.| ||| ||.|
Sbjct 1433 AAAAAGACAGACACTGTAAATGGCCAGTCATTAGAATAGTCCAGATGAAAGATGATAAGACCTGCCCTG-GAAG 1505
Query 947 AGGTGGCAGTCGCAGGATTTGGCTATGACATGAGCACACCCAACGCACCCCTGCACTACTATGAGACCGTTCGC 1020
.||||||||| |||.||.||.| |||.|.| ||.| |.|| .|||||||..
Sbjct 1506 TGGTGGCAGT---AGGTTTGGGAT----------------CAAGGGA----TGGA----TCTG-TACCGTTCTA 1551
Query 1021 ATGGCAGCCATCAAAGAGTC---CTGGA--------CGCACAATATCCA-GCGAGAGAAAGAGTTTCTGCGGAA 1082
| |||| |.|||.|| ||.|| .||||||..|||| .|.|| ||.||| .
Sbjct 1552 A--GCAG-----ATAGACTCGAACTTGATGACCAGCAGCACAAGGTCCACTCTAG---AACAGT---------C 1606
Query 1083 GCTGGTGAAAGCTCGCGTCATCACTGATCTAAGC------AGTGGCATC------------------------- 1125
|.|||.||.||| ||..|..||.| ||| |||||.|.|
Sbjct 1607 GATGGAGAGAGC------CAGGAGAGAGC--AGCAAGGGAAGTGGGAGCACAGGAGGGCAGACAGGAGAGAGGG 1672
Query 1126 --- 1125
Sbjct 1673 CAG 1675
