Nucleotide Global Alignment
Description
- Query:
- TRCN0000492284
- Subject:
- XM_017315441.1
- Aligned Length:
- 3024
- Identities:
- 1655
- Gaps:
- 1143
Alignment
Query 1 ATGGCCGCCGCGGAGACCCAGTCGCTACGGGAGCAGCCAGAGATGGAAGATGC---TAATTCTGAAAAGAGTAT 71
|||||||||.|||||.|||.|||.||.||||||||..|.||||||||.||||| ||||||||||||||||.|
Sbjct 1 ATGGCCGCCACGGAGCCCCCGTCCCTGCGGGAGCAAGCTGAGATGGATGATGCTGATAATTCTGAAAAGAGTGT 74
Query 72 AAATGAAGAAAATGGAGAAGTATCAGAAGACCAGTCTCAAAATAAGCACAGTCGTCACAAAAAAAAGAAGCATA 145
||||||||||||||||||.||||||||||||||.|||||||||||.||||||||||||||||||||||||||||
Sbjct 75 AAATGAAGAAAATGGAGAGGTATCAGAAGACCAATCTCAAAATAAACACAGTCGTCACAAAAAAAAGAAGCATA 148
Query 146 AACACAGAAGTAAACATAAGAAACATAAACATTCCTCAGAAGAAGACAAGGATAAAAAACATAAACATAAGCAT 219
||||||||||||||||||||||||||||||||||||||||||||||.|.||||||||||||.||||||||||||
Sbjct 149 AACACAGAAGTAAACATAAGAAACATAAACATTCCTCAGAAGAAGATAGGGATAAAAAACACAAACATAAGCAT 222
Query 220 AAACATAAGAAACACAAAAGAAAAGAGGTTATTGATGCTTCTGATAAAGAGGGTATGTCTCCAGCAAAAAGAAC 293
||.||||||||.||||||.|.|||||.|||||.||.|||||.||.|||||.||..||||.||.|||||||||||
Sbjct 223 AAGCATAAGAAGCACAAACGGAAAGAAGTTATCGAGGCTTCCGACAAAGAAGGCCTGTCCCCTGCAAAAAGAAC 296
Query 294 TAAACTTGATGATTTAGCTTTGCTAGAAGACTTGGAAAAACAGAGAGCCTTGATTAAGGCCGAACTTGATAATG 367
|||.||||||||||||||||||||.||||||||||||||.|||||||||||||||||.||.||.||||||||||
Sbjct 297 TAAGCTTGATGATTTAGCTTTGCTGGAAGACTTGGAAAAGCAGAGAGCCTTGATTAAAGCTGAGCTTGATAATG 370
Query 368 AGTTAATGGAAGGAAAGGTCCAGTCTGGTATGGGGCTCATTTTGCAAGGTTATGAGTCTGGCTCTGAAGAAGAG 441
||||||||||.||.||||||||||||||.||||||||||||||||||||.||||||||||||||.||||||||.
Sbjct 371 AGTTAATGGAGGGGAAGGTCCAGTCTGGAATGGGGCTCATTTTGCAAGGCTATGAGTCTGGCTCCGAAGAAGAA 444
Query 442 GGGGAAATTCATGAAAAGGCAAGAAATGGAAATAGGTCTAGTACTAGATCTTCAAGTACAAAGGGGAAACTTGA 515
||.||.|||||.|||||||||||||||||.||.|||||.|||||.||.|||||.|||||...|||.||||||||
Sbjct 445 GGAGAGATTCACGAAAAGGCAAGAAATGGGAACAGGTCCAGTACCAGGTCTTCCAGTACTCGGGGAAAACTTGA 518
Query 516 ACTTGTGGACAATAAAATTACTACAAAGAAACGAAGTAAAAGCAGATCCAAAGAACGGACTAGACATAGGTCTG 589
|.||..||||||.||||.||.|.||||||||||||||||.||||||||||||||||||||.||.||.||.||.|
Sbjct 519 AATTACGGACAACAAAAATAGTGCAAAGAAACGAAGTAAGAGCAGATCCAAAGAACGGACCAGGCACAGATCGG 592
Query 590 ATAAAAAGAAAAGTAAGGGGGGTATTGAAATCGTTAAAGAGAAAACAACTAGGAGCAAGTCAAAGGAGAGGAAA 663
|.||||.||||||.|||||||.|...|||||..|.|.|||||||.|||..|||||||||||.||||||||||.|
Sbjct 593 ACAAAAGGAAAAGCAAGGGGGCTGGGGAAATGCTGAGAGAGAAAGCAAACAGGAGCAAGTCCAAGGAGAGGAGA 666
Query 664 AAATCTAAAAGCCCATCCAAAAGAAGTAAGTCTCAAGATCAAGCAAGGAAATCAAAATCCCCTACCCTTAGAAG 737
|||||.||||||||||||||||||||.|||||||||||.|||||.||.||.|||||.||||||.|.||.|||.|
Sbjct 667 AAATCCAAAAGCCCATCCAAAAGAAGCAAGTCTCAAGACCAAGCTAGAAAGTCAAAGTCCCCTCCACTCAGACG 740
Query 738 GCGATCTCAAGAGAAAATTGGTAAGGCCAGATCTCCTACTGATGATAAGGTTAAAATTGAAGATAAAAGTAAAT 811
|||.||.|||||||||.|.||.|||||||||||||||.||||.||.|||.|.||.|.||||||.|||.|.|||.
Sbjct 741 GCGGTCCCAAGAGAAAGTGGGGAAGGCCAGATCTCCTGCTGAGGAGAAGATGAAGAGTGAAGAGAAAGGCAAAA 814
Query 812 CAAAAGATAGGAAAAAATCCCCAATTATAAATGAAAGTAGAAGTCGCGATCGAGGTAAAAAATCCAGATCCCCA 885
.|||.||||||||||||||.||||||.|||||||| ||.|||||.|||.||..|||||||||||..||||||
Sbjct 815 TAAAGGATAGGAAAAAATCACCAATTGTAAATGAA---AGGAGTCGAGATAGATCTAAAAAATCCAAGTCCCCA 885
Query 886 GTTGATTTAAGAGGTAAATCCAAAGACAGAAGGTCACGGTCCAAAGAGAGAAAATCAAAACGGTCTGAAACTGA 959
|||||.|||||||.||||||||||||||||||||||.|||||||||||.|.||.||||||||.|||||||.|||
Sbjct 886 GTTGACTTAAGAGATAAATCCAAAGACAGAAGGTCAAGGTCCAAAGAGCGGAAGTCAAAACGATCTGAAATTGA 959
Query 960 TAAAGAAAAGAAGCCAATTAAATCTCCCTCTAAAGATGCTTCATCTGGGAAAGAAAATAGGTCACCCAGCAGAA 1033
.|||||||||||||||||||||||.||.||.||.||||||||.||||||||.|||||||||||||||||.||||
Sbjct 960 CAAAGAAAAGAAGCCAATTAAATCACCTTCAAAGGATGCTTCTTCTGGGAAGGAAAATAGGTCACCCAGTAGAA 1033
Query 1034 GACCTGGTCGTAGTCCTAAAAGAAGAAGTTTGTCTCCAAAACCACGTGATAAATCAAGAAGAAGCAGGTCTCCA 1107
|||||||.||||||||||||||||||||||||||||||||||..||.||.||.|||||||||||.||||||||.
Sbjct 1034 GACCTGGCCGTAGTCCTAAAAGAAGAAGTTTGTCTCCAAAACTGCGAGACAAGTCAAGAAGAAGTAGGTCTCCG 1107
Query 1108 CTTTTGAATGATAGAAGATCTAAGCAGAGCAAATCCCCCTCGCGGACACTGTCTCCTGGGAGAAGAGCCAAGAG 1181
|||.|.|||||.|||||||||||||||||||||||.||.||.||.||.||||||||.||.|||||.||||||||
Sbjct 1108 CTTCTCAATGACAGAAGATCTAAGCAGAGCAAATCGCCTTCTCGAACTCTGTCTCCAGGCAGAAGGGCCAAGAG 1181
Query 1182 CCGATCCTTAGAAAGAAAACGACGAGAACCAGAGAGGAGACGACTTTCTTCTCCAAGAACACGACCTCGAGATG 1255
|||||||||||||||||||||..|||||||||||||||||||||||||||||||.||||||.||||||||||||
Sbjct 1182 CCGATCCTTAGAAAGAAAACGGAGAGAACCAGAGAGGAGACGACTTTCTTCTCCGAGAACAAGACCTCGAGATG 1255
Query 1256 ATATCCTCAGTAGACGTGAAAGATCAAAAGATGCCAGCCCCATCAATAGATGGTCTCCAACCCGAAGAAGAAGT 1329
|||||||..|||||.|||||.|.||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1256 ATATCCTTGGTAGATGTGAACGGTCAAAAGATGCCAGCCCCATCAATAGGTGGTCTCCAACCCGAAGAAGAAGT 1329
Query 1330 AGATCTCCCATTAGAAGGAGGTCTCGTTCCCCACTCAGACGTAGCAGGTCTCCAAGAAGAAGAAGCAGATCTCC 1403
||.|||||.||||||||||||||.|||||||||.|.|||||.|||||||||||.||||||||||||||.|||||
Sbjct 1330 AGGTCTCCAATTAGAAGGAGGTCCCGTTCCCCATTGAGACGCAGCAGGTCTCCTAGAAGAAGAAGCAGGTCTCC 1403
Query 1404 TCGGAGAAGGGACAGAGGTCGGAGGAGCAGATCACGCTTGCGAAGGCGGTCTCGATCACGCGGTGGTCGTAGAC 1477
|||||||||.||.||..|.||.||||||||.|||||||||.|.||..|||||||||||||.|||||||.|||..
Sbjct 1404 TCGGAGAAGAGATAGGAGCCGAAGGAGCAGGTCACGCTTGAGGAGAAGGTCTCGATCACGGGGTGGTCATAGGA 1477
Query 1478 GAAGGAGCAGAAGCAAAGTAAAGGAAGATAAATTTAAAGGAAGTCTTTCTGAAGGAATGAAAGTTGAGCAGGAA 1551
||||||||||||||||||||||||||||||||||||||||||||||.||.||||||||||||||||||||.||.
Sbjct 1478 GAAGGAGCAGAAGCAAAGTAAAGGAAGATAAATTTAAAGGAAGTCTCTCAGAAGGAATGAAAGTTGAGCAAGAG 1551
Query 1552 TCTTCGTCTGATGATAACCTTGAAGACTTTGATGTAGAGGAAGAAGATGAAGAAGCCCTAATAGAACAGAGAAG 1625
|||||.||||||||||||||||||||.||||||||.|||||.|||||||||||.||.|||||||||||||||||
Sbjct 1552 TCTTCATCTGATGATAACCTTGAAGATTTTGATGTGGAGGAGGAAGATGAAGAGGCTCTAATAGAACAGAGAAG 1625
Query 1626 AATCCAAAGGCAGGCAATTGTTCAGAAATATAAATACCTTGCTGAAGATAGCAACATGTCTGTGCCATCTGAAC 1699
|||.||.|||||.||||||||.||||||||||||||.|||||||||||||||||.||.||||||||||||||.|
Sbjct 1626 AATACAGAGGCAAGCAATTGTGCAGAAATATAAATATCTTGCTGAAGATAGCAATATATCTGTGCCATCTGAGC 1699
Query 1700 CAAGCAGCCCCCAGAGCAGTACGAGAACACGATCACCATCTCCAGATGACATTCTGGAGCGAGTAGCTGCTGAT 1773
|||||||||||||||||||.||.|||.|||||||.||.||.|||||.|||||..||||||||||.|||||||||
Sbjct 1700 CAAGCAGCCCCCAGAGCAGCACAAGATCACGATCTCCTTCGCCAGACGACATCTTGGAGCGAGTTGCTGCTGAT 1773
Query 1774 GTTAAAGAGTATGAACGGGAAAATGTTGATACATTTGAGGCCTCAGTGAAAGCCAAGCATAATCTAATGACAGT 1847
||.|||||.|||||.|||||.||||||||.||.||||||||||||||.||||||||||||||||||||||||||
Sbjct 1774 GTAAAAGAATATGAGCGGGAGAATGTTGACACCTTTGAGGCCTCAGTAAAAGCCAAGCATAATCTAATGACAGT 1847
Query 1848 TGAACAGAATAATGGTTCATCTCAGAAGAAGTTGTTGGCACCTGATATGTTTACAGAATCTGATGATATGTTTG 1921
|||||||||||||| || .||
Sbjct 1848 TGAACAGAATAATG--TC-----------------------------------------------------CTG 1866
Query 1922 CTGCGTATTTTGATAGTGCTCGTCTTCGGGCCGCTGGCATTGGAAAAGATTTCAAAGAGAATCCCAACCTCAGA 1995
|||||||||| || || ||||
Sbjct 1867 CTGCGTATTT--AT----------TT-----------CATT--------------------------------- 1884
Query 1996 GATAACTGGACCGATGCAGAAGGCTATTATCGTGTGAACATAGGTGAAGTCCTAGATAAACGTTACAATGTGTA 2069
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2070 TGGCTACACTGGGCAAGGTGTATTCAGTAATGTTGTACGAGCCAGAGATAATGCAAGAGCCAACCAAGAAGTGG 2143
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2144 CTGTAAAGATCATCAGAAACAATGAGCTCATGCAAAAGACTGGTTTAAAAGAATTAGAGTTCTTGAAAAAACTT 2217
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2218 AATGATGCTGATCCTGATGACAAATTTCATTGTCTGAGACTCTTCAGGCACTTCTATCACAAGCAGCATCTTTG 2291
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2292 TCTGGTATTCGAGCCTCTCAGCATGAACTTACGAGAGGTGTTAAAAAAATATGGTAAAGATGTTGGTCTTCATA 2365
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2366 TTAAAGCTGTAAGATCCTATAGTCAGCAGTTGTTCCTGGCATTGAAACTCCTTAAAAGATGCAATATCCTACAT 2439
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2440 GCAGATATCAAGCCAGACAATATCCTGGTTAATGAATCCAAAACTATTTTAAAGCTTTGCGATTTTGGGTCGGC 2513
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2514 TTCACATGTTGCGGATAATGACATAACACCTTATCTTGTCAGTAGATTTTATCGTGCTCCTGAAATCATTATAG 2587
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2588 GTAAAAGCTATGACTATGGTATAGATATGTGGTCTGTAGGTTGCACCTTATACGAACTCTATACTGGAAAAATT 2661
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2662 TTATTCCCTGGCAAAACCAATAACCATATGCTGAAGCTTGCAATGGATCTCAAAGGAAAGATGCCAAATAAGAT 2735
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2736 GATTCGAAAAGGTGTGTTCAAAGATCAGCATTTTGATCAAAATCTCAACTTCATGTACATAGAAGTTGATAAAG 2809
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2810 TAACAGAGAGGGAGAAAGTTACTGTTATGAGCACCATTAATCCAACTAAGGACCTGTTGGCTGACTTGATTGGG 2883
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2884 TGCCAGAGACTTCCTGAAGACCAACGTAAGAAAGTACACCAGCTAAAGGACTTGTTGGACCAGATTCTGATGTT 2957
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2958 GGACCCAGCTAAACGAATTAGCATCAACCAGGCCCTACAGCACGCCTTCATCCAGGAAAAAATT 3021
Sbjct 1885 ---------------------------------------------------------------- 1884