Nucleotide Global Alignment

Description

Query:
TRCN0000492306
Subject:
XM_017313826.1
Aligned Length:
1564
Identities:
1037
Gaps:
374

Alignment

Query    1  ATGTCAGATGCTCAGCTCGGTCCCCTCCGCCTGACGCTCCTCTCTGTCTCAGCCAGGACTGGTTTCTGTAAGAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ACAGCAGGAGCTGTGGCAGCGGCGAAAGGAAGCGGCTGAGGCGCTTGGAACCCGAAAAGTCTCGGTGCTCCTGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CTACCTCGCACAGCGGTGCCCGCCCGGCCGTCAGTACCATGGACAGCAGCGCTGCCCCCACGAACGCCAGCAAT  222
                                                  ||||||||||||||.|.|||...||||..||||.|.
Sbjct    1  --------------------------------------ATGGACAGCAGCGCCGGCCCAGGGAACATCAGCGAC  36

Query  223  TGCACTGATGCCTTGGCGTACT-CAAGTTGCTCCCCAGCACCCAGCCCCGGTTCCTGGGTCAACTTGTCCCACT  295
            |||.||||..||||.|| |.|| |||||||||||||||||      ||.||.||||||.||||||||||||||.
Sbjct   37  TGCTCTGACCCCTTAGC-TCCTGCAAGTTGCTCCCCAGCA------CCTGGCTCCTGGCTCAACTTGTCCCACG  103

Query  296  TAGATGGCAACCTGTCCGACCCATGTGGTCCGAACCGCACCGACCTGGGCGGGAGAGACAGCCTGTGCCCTCCG  369
            |.||||||||||.||||||||||||.|||||.||||||||.|..||.||||||||..|||||||||||||||.|
Sbjct  104  TTGATGGCAACCAGTCCGACCCATGCGGTCCTAACCGCACGGGGCTTGGCGGGAGCCACAGCCTGTGCCCTCAG  177

Query  370  ACCGGCAGTCCCTCCATGATCACGGCCATCACGATCATGGCCCTCTACTCCATCGTGTGCGTGGTGGGGCTCTT  443
            ||||||||.||.||||||.||||.||||||||.||||||||||||||.||.||||||||.||.|||||.|||||
Sbjct  178  ACCGGCAGCCCTTCCATGGTCACAGCCATCACCATCATGGCCCTCTATTCTATCGTGTGTGTAGTGGGCCTCTT  251

Query  444  CGGAAACTTCCTGGTCATGTATGTGATTGTCAGATACACCAAGATGAAGACTGCCACCAACATCTACATTTTCA  517
            .|||||||||||||||||||||||||||||.|||||.|||||.|||||||||||||||||||||||||||||||
Sbjct  252  TGGAAACTTCCTGGTCATGTATGTGATTGTAAGATATACCAAAATGAAGACTGCCACCAACATCTACATTTTCA  325

Query  518  ACCTTGCTCTGGCAGATGCCTTAGCCACCAGTACCCTGCCCTTCCAGAGTGTGAATTACCTAATGGGAACATGG  591
            ||||||||||||||||||||||||||||.||.||.||||||||.||||||||.||.|||||.||||||||.|||
Sbjct  326  ACCTTGCTCTGGCAGATGCCTTAGCCACTAGCACGCTGCCCTTTCAGAGTGTTAACTACCTGATGGGAACGTGG  399

Query  592  CCATTTGGAACCATCCTTTGCAAGATAGTGATCTCCATAGATTACTATAACATGTTCACCAGCATATTCACCCT  665
            ||.|||||||.||||||.||||||||.||||||||.|||||.|||||.||||||||||||||.||.||||||||
Sbjct  400  CCCTTTGGAAACATCCTCTGCAAGATCGTGATCTCAATAGACTACTACAACATGTTCACCAGTATCTTCACCCT  473

Query  666  CTGCACCATGAGTGTTGATCGATACATTGCAGTCTGCCACCCTGTCAAGGCCTTAGATTTCCGTACTCCCCGAA  739
            |||||||||||||||.||.||.||||||||.|||||||||||.|||||||||.|.|||||||||||.|||||||
Sbjct  474  CTGCACCATGAGTGTAGACCGCTACATTGCCGTCTGCCACCCGGTCAAGGCCCTGGATTTCCGTACCCCCCGAA  547

Query  740  ATGCCAAAATTATCAATGTCTGCAACTGGATCCTCTCTTCAGCCATTGGTCTTCCTGTAATGTTCATGGCTACA  813
            |||||||||||.||||||||||||||||||||||||||||.|||||||||||.||.||||||||||||||.||.
Sbjct  548  ATGCCAAAATTGTCAATGTCTGCAACTGGATCCTCTCTTCTGCCATTGGTCTGCCCGTAATGTTCATGGCAACC  621

Query  814  ACAAAATACAGGCAAGGTTCCATAGATTGTACACTAACATTCTCTCATCCAACCTGGTACTGGGAAAACCTGCT  887
            ||||||||||||||.||.|||||||||||.||.||.||.|||||||||||.||.|||||||||||.||||||||
Sbjct  622  ACAAAATACAGGCAGGGGTCCATAGATTGCACCCTCACGTTCTCTCATCCCACATGGTACTGGGAGAACCTGCT  695

Query  888  GAAGATCTGTGTTTTCATCTTCGCCTTCATTATGCCAGTGCTCATCATTACCGTGTGCTATGGACTGATGATCT  961
            .||.||||||||.|||||||||||||||||.|||||.||.||||||||.||.|||||.||||||||||||||||
Sbjct  696  CAAAATCTGTGTCTTCATCTTCGCCTTCATCATGCCGGTCCTCATCATCACTGTGTGTTATGGACTGATGATCT  769

Query  962  TGCGCCTCAAGAGTGTCCGCATGCTCTCTGGCTCCAAAGAAAAGGACAGGAATCTTCGAAGGATCACCAGGATG  1035
            |.||.||||||||||||||||||||.||.|||||||||||||||||||||||.||.||.|||||||||.|||||
Sbjct  770  TACGACTCAAGAGTGTCCGCATGCTGTCGGGCTCCAAAGAAAAGGACAGGAACCTGCGCAGGATCACCCGGATG  843

Query 1036  GTGCTGGTGGTGGTGGCTGTGTTCATCGTCTGCTGGACTCCCATTCACATTTACGTCATCATTAAAGCCTTGGT  1109
            |||||||||||.||||||||.||.||.|||||||||||.|||||.|||||.||.||||||||.|||||..||.|
Sbjct  844  GTGCTGGTGGTCGTGGCTGTATTTATTGTCTGCTGGACCCCCATCCACATCTATGTCATCATCAAAGCACTGAT  917

Query 1110  TACAATCCCAGAAACTACGTTCCAGACTGTTTCTTGGCACTTCTGCATTGCTCTAGGTTACACAAACAGCTGCC  1183
            .||.||.||||||||.||.||||||||||||||.|||||||||||||||||..|.|||||||||||||||||||
Sbjct  918  CACGATTCCAGAAACCACTTTCCAGACTGTTTCCTGGCACTTCTGCATTGCCTTGGGTTACACAAACAGCTGCC  991

Query 1184  TCAACCCAGTCCTTTATGCATTTCTGGATGAAAACTTCAAACGATGCTTCAGAGAGTTCTGTATCCCAACCTCT  1257
            |.||||||||.||||||||.||.|||||||||||||||||||||||.||.|||||||||||.||||||||.||.
Sbjct  992  TGAACCCAGTTCTTTATGCGTTCCTGGATGAAAACTTCAAACGATGTTTTAGAGAGTTCTGCATCCCAACTTCC  1065

Query 1258  TCCAACATTGAGCAACAAAACTCCACTCGAATTCGTCAGAACACTAGAGACCACCCCTCCACGGCCAATACAGT  1331
            ||||..||.||.||.||||||||..|||||||.|||||.||||||||.||.||||||||||||||.||||||||
Sbjct 1066  TCCACAATCGAACAGCAAAACTCTGCTCGAATCCGTCAAAACACTAGGGAACACCCCTCCACGGCTAATACAGT  1139

Query 1332  GGATAGAACTAATCATCAGCTA--GAAA---------ATCTGGAAGCAGAAACT--GCTCC----GTTGCCC--  1386
            ||||.|||||||.||.|||.||  ||||         ||||   |.|..|||||  |||.|    .|||..|  
Sbjct 1140  GGATCGAACTAACCACCAGATAATGAAATTTGAAGCTATCT---ACCCTAAACTGAGCTTCAAATCTTGGGCAT  1210

Query 1387  --------------------------------------------------------------------------  1386
                                                                                      
Sbjct 1211  TGAAATATTTTACTTTCATTAGAGAAAAGAAAAGGAACACAAAAGCTGGGGCTCTTCCTCCCCTCCCTACGTGT  1284

Query 1387  --------------------------------------------------------------------------  1386
                                                                                      
Sbjct 1285  CATGCTGGATCTCCCTCCCAGGCTCACAGGGGCGTGGCTGCTTGGTTGCTTCCTCTAAGACACATGGGGCCTTC  1358

Query 1387  ----------  1386
                      
Sbjct 1359  TTATCCTTCC  1368