Nucleotide Global Alignment
Description
- Query:
- TRCN0000492319
- Subject:
- NR_135296.1
- Aligned Length:
- 2872
- Identities:
- 993
- Gaps:
- 1838
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAATGATGATGTCGCACGCTGGGTGGGAACTGACGTCACCTGTGCTCACCGCCGCTTCCGGTCCGCGTGAGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCATTCTCGCGCCGGTGGCGAGGTTAGGGCCCGCGTTGCGACGTGGTGCAGCGCATATTTTCACAAGTGGGTCT 148
Query 1 ---------------------------------------------------------ATGGGTTTCAATCGTCC 17
..||.|.|||| |||.
Sbjct 149 CCCTTGTCCGGGACTATGGCCACCGACTCGTGGGCCCTGGCGGTGGACGAGCAGGAAGCGGCTGTCAA--GTCG 220
Query 18 AT--CCA------AGATAC----AAGAGAACG-------------------------------CATTGCCACTG 48
|| ||| |||| | |||||||.| ||.|.||||
Sbjct 221 ATGACCAATTTGCAGAT-CAAGGAAGAGAAAGTCAAAGCAGATACCAATGGTATTATCAAAACCAGTACCAC-- 291
Query 49 ATGCTTGCTGAGCCCCCACAGA-----------------ACTTAATTGCCCAATCTCAGTCTGGTACTGGTAAA 105
|||.||| ...||||| ||..|..||||||.|| || |||| .|
Sbjct 292 -----TGCCGAG--AAAACAGATGAAGAGGAGAAAGAGGACAGAGCTGCCCAGTC-----CT--TACT----CA 347
Query 106 AC-AGCTG-----------CCTTCGTGCTGGC-CATGCTTAGCCAAGTAGAA--CCTGCAA------ACAAATA 158
|| ||||| ||||..||.|..| || |.||||||.||| ||||||| .||||..
Sbjct 348 ACAAGCTGATCAGAAGCAACCTTGTTGATAACACA-----AACCAAGTGGAAGTCCTGCAACGGGATCCAAACT 416
Query 159 CCCC--------CAGTGTCTATGTC------------------------------TCTCC------------CC 182
|||| |.||| |.||| ||||| ||
Sbjct 417 CCCCTCTGTACTCGGTG---AAGTCGTTTGAAGAGCTTCGGCTGAAACCACAGCTTCTCCAGGGAGTCTATGCC 487
Query 183 AACGTATGAGC-----TCG-CCCTCCAA---ACAGGAAAAGTGATTGAACAAATGGGCAAATTTTACCCTGAAC 247
|||.|| ||| |||||||| |||.|| |||| ||| |||||| .
Sbjct 488 -----ATGGGCTTCAATCGACCCTCCAAGATACAAGA---------GAAC------GCA----TTACCC----A 533
Query 248 TGAAGCTAGCTTATGCTGTTCGAGGCAATAAATTGGAAAGAGGCCAGAAGATCAGTGAGCAGATTGTCATTGGC 321
|||.||| ||||| ||..|||||||||||||||||||||||||||||||||||||||||
Sbjct 534 TGATGCT------TGCTG-----------AACCTGGAAAGAGGCCAGAAGATCAGTGAGCAGATTGTCATTGGC 590
Query 322 ACCCCTGGGACTGTGCTGGACTGGTGCTCCAAGCTCAAGTTCATTGATCCCAAGAAAATCAAGGTGTTTGTTCT 395
|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 591 ACCCCTGGGACCGTGCTGGACTGGTGCTCCAAGCTCAAGTTCATTGATCCCAAGAAAATCAAGGTGTTTGTTCT 664
Query 396 GGATGAGGCTGATGTCATGATAGCCACTCAGGGCCACCAAGATCAGAGCATCCGCATCCAGAGGATGCTGCCCA 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 665 GGATGAGGCTGATGTCATGATAGCCACTCAGGGCCACCAAGATCAGAGCATCCGCATCCAGAGGATGCTGCCCA 738
Query 470 GGAACTGCCAGATGCTGCTTTTCTCCGCCACCTTTGAAGACTCTGTGTGGAAGTTTGCCCAGAAAGTGGTCCCA 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 739 GGAACTGCCAGATGCTGCTTTTCTCCGCCACCTTTGAAGACTCTGTGTGGAAGTTTGCCCAGAAAGTGGTCCCA 812
Query 544 GACCCAAACGTTATCAAACTGAAGCGTGAGGAAGAGACCCTGGACACCATCAAGCAGTACTATGTCCTGTGCAG 617
||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 813 GACCCAAATGTTATCAAACTGAAGCGTGAGGAAGAGACCCTGGATACCATCAAGCAGTACTATGTCCTGTGCAG 886
Query 618 CAGCAGAGACGAGAAGTTCCAGGCCTTGTGTAACCTCTACGGGGCCATCACCATTGCTCAAGCCATGATCTTCT 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 887 CAGCAGAGACGAGAAGTTCCAGGCCTTGTGTAACCTCTACGGGGCCATCACCATTGCTCAAGCCATGATCTTCT 960
Query 692 GCCATACTCGCAAAACAGCTAGTTGGCTGGCAGCAGAGCTCTCAAAAGAAGGCCACCAGGTGGCTCTGCTGAGT 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 GCCATACTCGCAAAACAGCTAGTTGGCTGGCAGCAGAGCTCTCAAAAGAAGGCCACCAGGTGGCTCTGCTGAGT 1034
Query 766 GGGGAGATGATGGTGGAACAGAGGGCTGCAGTGATTGAGCGCTTCCGAGAGGGCAAAGAGAAGGTTTTGGTGAC 839
|||||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035 GGGGAGATGATGGTGGAGCAGAGGGCTGCGGTGATTGAGCGCTTCCGAGAGGGCAAAGAGAAGGTTTTGGTGAC 1108
Query 840 CACCAACGTGTGTGCCCGCGGCATTGATGTTGAACAAGTGTCTGTCGTCATCAACTTTGATCTTCCCGTGGACA 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1109 CACCAACGTGTGTGCCCGCGGCATTGATGTTGAACAAGTGTCTGTCGTCATCAACTTTGATCTTCCCGTGGACA 1182
Query 914 AGGACGGGAATCCTGACAATGAGACCTACCTGCACCGGATCGGGCGCACGGGCCGCTTTGGCAAGAGGGGCCTG 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1183 AGGACGGGAATCCTGACAATGAGACCTACCTGCACCGGATCGGGCGCACGGGCCGCTTTGGCAAGAGGGGCCTG 1256
Query 988 GCAGTGAACATGGTGGACAGCAAGCACAGCATGAACATCCTGAACAGAATCCAGGAGCATTTTAATAAGAAGAT 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257 GCAGTGAACATGGTGGACAGCAAGCACAGCATGAACATCCTGAACAGAATCCAGGAGCATTTTAATAAGAAGAT 1330
Query 1062 AGAAAGATTGGACACAGATGATTTGGACGAGATTGAGAAAATAGCCAAC------------------------- 1110
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1331 AGAAAGATTGGACACAGATGATTTGGACGAGATTGAGAAAATAGCCAACTGAGAAGCTCCACCAGCCACTGATG 1404
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1405 CCAGCCCTGGCACTGCCCCTGCACAGGAGACAAGTGCATTTAGGGCACAGGCCCCGACATCACCCCAAGGACAA 1478
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1479 CGGCAGAAGTAGAGAGAAACTACCTACCTCACTTCAAATTATGTTTGGACTTGACAAAAATAGGTGCAAATGAT 1552
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1553 GGGGGGCAATAGAAGAAAAAATTTGCATTTTGGAAAATTGGGTCCTTTCCCCACTTTTTTAAAGCCACATTCCC 1626
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1627 CCATCTTTATAATAATCTGGTCACAGTGGTAGTCGCTGGCCCCAGGACCCCCTCCTGATTTTGGCTAGGCATCG 1700
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1701 TGGAACCAGCTCCAGCCCCTGAAGAAACGATAGATGTGCAGGTTGTGCGGAAGAGGCTGAGTGGAAAATGGTGT 1774
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1775 GAGCCCCACCGCTGTGCATCGAATGAGGGAAGTGGCAGCAGAGAGGCCAGAGCTGCCCCCTCTCTGTCTCTTCA 1848
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1849 ATGGACCCTTCACAAGTGTTTCTCCTGCCCTTGGGGCTGTCTTCCTTCTCCTGAAATCCAGAGACTTTCTTGCT 1922
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1923 CATCCCTTCTCCCTTTCACTTCTGTTCTCTGCTGCAGAAAGCAGACTTGCATATCCCTGATGAGCAGCTCGGCT 1996
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1997 ACTTTTGTAAACTTCAGATTTGGAGAGAAACACGAAAGTCTGAATCCTGACCCCTTGAGAGAGAGTGATCTGGC 2070
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2071 GAGGGCCGATGAAGGGGCTGGGCCTGGTCTTGCCTTCTCTTCTCTCGGTTGCTCCCTCTGCCTAGGCCCCTGGT 2144
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2145 ACTCAGTCACGGCAGCCAGGAGACCCCAGGTGAGTTTCTGAGCGCATACGTAGTTGGTTCTTACCCCCAGGTGT 2218
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2219 CACACGGGGCCGAGAGCTGAGCAAGAATTTGGAATGGAAGTTATGACCAAGGGAATTATGCTGTTCATTTATAA 2292
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2293 TAGTGGACATTATGGAGAGCTCTGATTCCTACATAATATGAATAAGGATGGATAGGCCGGGCGTGGTGGCTCAT 2366
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2367 GCCTATAATCCCAGCACGTTGGGAGGCTGAGGCGGGCGGATCGGTTGAGCTCAGGCGTTCGGGACCAGCCTGGC 2440
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2441 CAACATGATGAAACCCCGTCTCTACCAAAAATAGAAAAAAATATAGCCGGGCCTGGTGGCGCACGCCTGTAGTC 2514
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2515 CCAGCTACTCGGGAGGCTGAGGTAGGAGGATCGCTTGAGCCTGGGTAGAGGCTGCTGTGAGCTGAAATGGCGCC 2588
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2589 ACTGCACTCCAGCCTGGGTAACAGAGCGAGACCCCGACTCAATAAATAAATAAGGATGGATAAATTGTAGCGTA 2662
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2663 TGCACCATTCATTATGCTAAGACATTTTAAAGTAATTATGAGAAACGCTCTACTAATGATTTGTTTTTATTTGT 2736
Query 1111 ------------------------------------------------------------ 1110
Sbjct 2737 ATTTTTCTGCTTATTAGACAAATATATACTCATTTTAAAAAGGAAAAAAAAAAAAAAAAA 2796
