Nucleotide Global Alignment
Description
- Query:
- TRCN0000492346
- Subject:
- XM_011250816.2
- Aligned Length:
- 2601
- Identities:
- 1011
- Gaps:
- 1492
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGATGTCTCTCTTTGCCCAGCCAAGTGTAGTTTCTGGCGGATTTTCTTGCTGGGAAGCGTCTGGCTGGACTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGTGGGCTCCGTGCTGGCTTGCCCTGCAAATTGTGTCTGCAGCAAGACTGAGATCAATTGCCGGCGGCCGGACG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATGGGAACCTCTTCCCTCTCCTGGAAGGGCAGGATTCAGGGAACAGCAATGGGAACGCCAGCATCAACATTACG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GACATCTCAAGGAATATCACTTCCATACACATAGAGAACTGGCGAGGCCTGCACACACTCAATGCTGTGGACAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGAGCTCTACACGGGACTCCAGAAGCTGACCATCAAGAATTCTGGACTCCGGAACATCCAGCCCAGAGCCTTCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCAAGAACCCCCACTTGCGTTATATAAACTTGTCAAGTAACCGGCTCACCACACTCTCCTGGCAGCTCTTCCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACGCTGAGCCTTCGGGAATTGAGACTGGAGCAGAACTTCTTCAACTGCAGCTGTGACATCCGCTGGATGCAGCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTGGCAGGAACAGGGGGAGGCGCGGCTGGACAGCCAGAGCCTTTACTGCATCAGTGCTGATGGCTCCCAACTCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCCTCTTCCGCATGAACATCAGTCAGTGTGATCTCCCAGAGATCAGTGTGAGCCACGTCAACCTGACTGTCCGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAAGGAGACAATGCCGTGATCACTTGCAATGGCTCTGGCTCTCCTTTGCCTGATGTGGACTGGATAGTCACTGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCTGCAGTCCATCAACACCCACCAGACCAATCTGAACTGGACCAATGTACATGCCATCAACTTGACCCTGGTGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACGTGACGAGCGAGGACAATGGCTTCACCCTGACGTGCATTGCAGAGAACGTGGTGGGCATGAGCAATGCCAGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTTGCTCTCACTGTCTACTACCCTCCACGTGTGGTGAGCCTGGTGGAGCCTGAGGTACGCCTGGAACATTGCAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGAGTTTGTGGTGCGTGGCAACCCGACACCCACGCTCCACTGGCTGTACAATGGACAGCCATTGAGGGAGTCCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGATCATTCACATGGACTACTACCAGGAGGGGGAGGTCTCAGAGGGCTGCCTGCTCTTCAACAAGCCCACCCAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TACAACAATGGCAACTACACCCTCATTGCTAAGAATGCCCTGGGCACGGCCAACCAGACCATCAACGGCCACTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCTGAAGGAGCCCTTTCCAGAGAGCACAGATTTCTTTGACTTTGAGTCTGATGCGAGCCCTACACCTCCTATCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTGTGACCCACAAACCAGAGGAAGACACTTTTGGGGTGTCCATAGCAGTCGGACTTGCTGCCTTTGCCTGCGTC 1332
Query 1 ----------------------------------ATGGTCGACGGTCCAAATTTGGAATGAAGGGTCCCGTGGC 40
|||||||.||||||||||||||||||||||||||.|||||
Sbjct 1333 CTTCTGGTGGTTCTCTTTATCATGATCAACAAGTATGGTCGCCGGTCCAAATTTGGAATGAAGGGTCCTGTGGC 1406
Query 41 TGTCATCAGTGGTGAGGAGGACTCAGCCAGCCCACTGCACCACATCAACCACGGCATCACCACGCCCTCGTCAC 114
|||.||||||||.||||||||||||||||||||||||||.|||||||||||.||||||||.||.||.||.||..
Sbjct 1407 TGTTATCAGTGGAGAGGAGGACTCAGCCAGCCCACTGCATCACATCAACCATGGCATCACTACACCATCATCGT 1480
Query 115 TGGATGCCGGGCCCGACACTGTGGTCATTGGCATGACTCGCATCCCTGTCATTGAGAACCCCCAGTACTTCCGT 188
|||||||.|||||.|||||.|||||||||||||||||.||||||||.|||||||||||||||||||||||||||
Sbjct 1481 TGGATGCTGGGCCTGACACAGTGGTCATTGGCATGACCCGCATCCCAGTCATTGAGAACCCCCAGTACTTCCGT 1554
Query 189 CAGGGACACAACTGCCACAAGCCGGACACGTATGTGCAGCACATTAAGAGGAGAGACATCGTGCTGAAGCGAGA 262
|||||.|||||.|||||||||||.|||||.|||||.||||||||.||||||||||||||||||.|||||.||||
Sbjct 1555 CAGGGTCACAATTGCCACAAGCCAGACACATATGTTCAGCACATCAAGAGGAGAGACATCGTGTTGAAGAGAGA 1628
Query 263 ACTGGGTGAGGGAGCCTTTGGAAAGGTCTTCCTGGCCGAGTGCTACAACCTCAGCCCGACCAAGGACAAGATGC 336
|.|||||||||||||||||||.||||||||||||||.|||||||||||.||.|||||.|||||.||||||||||
Sbjct 1629 ATTGGGTGAGGGAGCCTTTGGGAAGGTCTTCCTGGCTGAGTGCTACAATCTAAGCCCCACCAAAGACAAGATGC 1702
Query 337 TTGTGGCTGTGAAGGCCCTGAAGGATCCCACCCTGGCTGCCCGGAAGGATTTCCAGAGGGAGGCCGAGCTGCTC 410
|.|||||.||||||||||||||||||||||||.||||||||.||||||||||||||||||||||.|||||||||
Sbjct 1703 TAGTGGCAGTGAAGGCCCTGAAGGATCCCACCTTGGCTGCCAGGAAGGATTTCCAGAGGGAGGCTGAGCTGCTC 1776
Query 411 ACCAACCTGCAGCATGAGCACATTGTCAAGTTCTATGGAGTGTGCGGCGATGGGGACCCCCTCATCATGGTCTT 484
||.|||||||||||||||||.|||||||||||||||||.|||||.||.|||||.|||||.||||||||||||||
Sbjct 1777 ACGAACCTGCAGCATGAGCATATTGTCAAGTTCTATGGGGTGTGTGGTGATGGTGACCCACTCATCATGGTCTT 1850
Query 485 TGAATACATGAAGCATGGAGACCTGAATAAGTTCCTCAGGGCCCATGGGCCAGATGCAATGATCCTTGTGGATG 558
||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||.||||||||.|||||||
Sbjct 1851 TGAATACATGAAGCATGGAGACCTTAACAAGTTCCTCAGGGCCCATGGGCCAGATGCCATGATCCTCGTGGATG 1924
Query 559 GACAGCCACGCCAGGCCAAGGGTGAGCTGGGGCTCTCCCAAATGCTCCACATTGCCAGTCAGATCGCCTCGGGT 632
||||||||||.|||||||||||.|||||.||||||||.||.|||||||||||.|||||||||||.||||||||.
Sbjct 1925 GACAGCCACGTCAGGCCAAGGGGGAGCTAGGGCTCTCTCAGATGCTCCACATCGCCAGTCAGATAGCCTCGGGC 1998
Query 633 ATGGTGTACCTGGCCTCCCAGCACTTTGTGCACCGAGACCTGGCCACCAGGAACTGCCTGGTTGGAGCGAATCT 706
||||||||||||||.||||||||||||||.|||||.|||||||||||.||||||||||||||||||||.|||||
Sbjct 1999 ATGGTGTACCTGGCTTCCCAGCACTTTGTACACCGGGACCTGGCCACGAGGAACTGCCTGGTTGGAGCCAATCT 2072
Query 707 GCTAGTGAAGATTGGGGACTTCGGCATGTCCAGAGATGTCTACAGCACGGATTATTACAG-------------- 766
.||||||||||||||.||.||.|||||||||||.||.||||||||.||.|||||.|||||
Sbjct 2073 ACTAGTGAAGATTGGAGATTTTGGCATGTCCAGGGACGTCTACAGTACTGATTACTACAGGGAAGGGCCATGCC 2146
Query 767 -------------------------------------------------------------------------- 766
Sbjct 2147 AGAAGGGCCCATTCAACGTGTCGTGGCAGCAGCAGAGGCTAGCAGCGTCAGCAGCTTCCACACTCTTTAATCCA 2220
Query 767 -----------------------------GGTGGGAGGACACACCATGCTCCCCATTCGCTGGATGCCTCCTGA 811
|||||||||||||||||||||||||||.|||||||||||.|||||
Sbjct 2221 TCTGGAAATGATTTTTGTATATGGTGTGAGGTGGGAGGACACACCATGCTCCCCATCCGCTGGATGCCCCCTGA 2294
Query 812 AAGCATCATGTACCGGAAGTTCACTACAGAGAGTGATGTATGGAGCTTCGGGGTGATCCTCTGGGAGATCTTCA 885
||||||.|||||||||||||||||.||||||||||||||.||||||||||||||.||.||.|||||||||||.|
Sbjct 2295 AAGCATAATGTACCGGAAGTTCACCACAGAGAGTGATGTCTGGAGCTTCGGGGTTATTCTTTGGGAGATCTTTA 2368
Query 886 CCTATGGAAAGCAGCCATGGTTCCAACTCTCAAACACGGAGGTCATTGAGTGCATTACCCAAGGTCGTGTTTTG 959
|||||||.|||||.|||||||||||.||.||.|||||||||||||||||.|||||.||||||||.|||||.|||
Sbjct 2369 CCTATGGGAAGCAACCATGGTTCCAGCTTTCCAACACGGAGGTCATTGAATGCATCACCCAAGGCCGTGTCTTG 2442
Query 960 GAGCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATGTCATGCTGGGGTGCTGGCAGAGGGAACCACAGCAGCG 1033
|||.|.|||.||||||||||.|||||.|||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 GAGAGACCCAGAGTCTGCCCTAAAGAAGTGTATGATGTCATGCTGGGGTGCTGGCAGAGGGAACCACAGCAGCG 2516
Query 1034 GTTGAACATCAAGGAGATCTACAAAATCCTCCATGCTTTGGGGAAGGCCACCCCAATCTACCTGGACATTCTTG 1107
|.||||.||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 2517 GCTGAATATTAAGGAGATCTACAAAATCCTCCATGCTTTGGGGAAGGCCACCCCGATCTACCTGGACATTCTTG 2590
Query 1108 GCTAGAAGCTT 1118
||
Sbjct 2591 GC--------- 2592
