Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00154
- Subject:
- NR_134945.2
- Aligned Length:
- 3762
- Identities:
- 1176
- Gaps:
- 2586
Alignment
Query 1 -----------------------ATGGCGGTTGTAGCGGCGGCTGCCGGCTGGCTACTCAGGCTCAGGGCGGCA 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GAGAATCCCGGTGGTGAGCGGGGATGGCGGTTGTAGCGGCGGCTGCCGGCTGGCTACTCAGGCTCAGGGCGGCA 74
Query 52 GGGGCTGAGGGGCACTGGCGTCGGCTTCCTGGCGCGGGGCTGGCGCGGGGCTTTTTGCACCCCGCCGCGACTGT 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGGGCTGAGGGGCACTGGCGTCGGCTTCCTGGCGCGGGGCTGGCGCGGGGCTTTTTGCACCCCGCCGCGACTGT 148
Query 126 CGAGGATGCGGCCCAGAGGCGGCAGGTGGCTCATTTTACTTTCCAGCCAGATCCGGAGCCCCGGGAGTACGGGC 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CGAGGATGCGGCCCAGAGGCGGCAGGTGGCTCATTTTACTTTCCAGCCAGATCCGGAGCCCCGGGAGTACGGGC 222
Query 200 AAACTCAGAAAATGAATCTTTTCCAGTCTGTAACAAGTGCCTTGGATAACTCATTGGCCAAAGATCCTACTGCA 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAACTCAGAAAATGAATCTTTTCCAGTCTGTAACAAGTGCCTTGGATAACTCATTGGCCAAAGATCCTACTGCA 296
Query 274 GTAATATTTGGTGAAGATGTTGCCTTTGGTGGAGTCTTTAGATGCACTGTTGGCTTGCGAGACAAATATGGAAA 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTAATATTTGGTGAAGATGTTGCCTTTGGTGGAGTCTTTAGATGCACTGTTGGCTTGCGAGACAAATATGGAAA 370
Query 348 AGATAGAGTTTTTAATACCCCATTGTGTGAACAAGGAATTGTTGGATTTGGAATCGGAATTGCGGTCACTGGAG 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGATAGAGTTTTTAATACCCCATTGTGTGAACAAGGAATTGTTGGATTTGGAATCGGAATTGCGGTCACTGGAG 444
Query 422 CTACTGCCATTGCGGAAATTCAGTTTGCAGATTATATTTTCCCTGCATTTGATCAGATTGTTAATGAAGCTGCC 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTACTGCCATTGCGGAAATTCAGTTTGCAGATTATATTTTCCCTGCATTTGATCAGATTGTTAATGAAGCTGCC 518
Query 496 AAGTATCGCTATCGCTCTGGGGATCTTTTTAACTGTGGAAGCCTCACTATCCGGTCCCCTTGGGGCTGTGTTGG 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAGTATCGCTATCGCTCTGGGGATCTTTTTAACTGTGGAAGCCTCACTATCCGGTCCCCTTGGGGCTGTGTTGG 592
Query 570 TCATGGGGCTCTCTATCATTCTCAGAGTCCTGAAGCATTTTTTGCCCATTGCCCAGGAATCA------------ 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCATGGGGCTCTCTATCATTCTCAGAGTCCTGAAGCATTTTTTGCCCATTGCCCAGGAATCAAGATCAAAGTTA 666
Query 632 -------------------------------------------------------------------------- 631
Sbjct 667 TAAGCTTATCTTAGTTGAGTAGATGTTGCCTGATTTTTGAATGTGAGCTAGAAGTTGTAGACTGGGAAAGAAGC 740
Query 632 --------AGGTGGTTATACCCAGAAGCCCTTTCCAGGCCAAAGGACTTCTTTTGTCATGCATAGAGGATAAAA 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CATGTGCGAGGTGGTTATACCCAGAAGCCCTTTCCAGGCCAAAGGACTTCTTTTGTCATGCATAGAGGATAAAA 814
Query 698 ATCCTTGTATATTTTTTGAACCTAAAATACTTTACAGGGCAGCAGCGGAAGAAGTCCCTATAGAACCATACAAC 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATCCTTGTATATTTTTTGAACCTAAAATACTTTACAGGGCAGCAGCGGAAGAAGTCCCTATAGAACCATACAAC 888
Query 772 ATCCCACTGTCCCAGGCCGAAGTCATACAGGAAGGGAGTGATGTTACTCTAGTTGCCTGGGGCACTCAGGTTCA 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATCCCACTGTCCCAGGCCGAAGTCATACAGGAAGGGAGTGATGTTACTCTAGTTGCCTGGGGCACTCAGGTTCA 962
Query 846 TGTGATCCGAGAGGTAGCTTCCATGGCAAAAGAAAAGCTTGGAGTGTCTTGTGAAGTCATTGATCTGAGGACTA 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGTGATCCGAGAGGTAGCTTCCATGGCAAAAGAAAAGCTTGGAGTGTCTTGTGAAGTCATTGATCTGAGGACTA 1036
Query 920 TAATACCTTGGGATGTGGACACAATTTGTAAGTCTGTGATCAAAACAGGGCGACTGCTAATCAGTCACGAGGCT 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TAATACCTTGGGATGTGGACACAATTTGTAAGTCTGTGATCAAAACAGGGCGACTGCTAATCAGTCACGAGGCT 1110
Query 994 CCCTTGACAGGCGGCTTTGCATCGGAAATCAGCTCTACAGTTCAGGAGGAATGTTTCTTGAACCTAGAGGCTCC 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CCCTTGACAGGCGGCTTTGCATCGGAAATCAGCTCTACAGTTCAGGAGGAATGTTTCTTGAACCTAGAGGCTCC 1184
Query 1068 TATATCAAGAGTATGTGGTTATGACACACCATTTCCTCACATTTTTGAACCATTCTACATCCCAGACAAATGGA 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TATATCAAGAGTATGTGGTTATGACACACCATTTCCTCACATTTTTGAACCATTCTACATCCCAGACAAATGGA 1258
Query 1142 AGTGTTATGATGCCCTTCGAAAAATGATCAACTAT--------------------------------------- 1176
|||||||||||||||||||||||||||||||||||
Sbjct 1259 AGTGTTATGATGCCCTTCGAAAAATGATCAACTATTGACCATATAGGTAGGTATGCATCTTGAGAAAGCTACTA 1332
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1333 TGTGCCCCTGACATTAACGTACTGTTAACCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGAT 1406
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1407 GGTAAAGTTGGTAAAAGGCAACTTTCAGAAGAAAATAATGTGCTTTAGAAAAAAAATTCAAATTTATAGTAGTA 1480
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1481 TATTTACATTTTTGTTGTTGTTGTTGTTCTGAGATGGAGTCTCACTCTGTCGCCCAGGCTAGACTGCAGTGGTG 1554
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1555 CAATCTCAGCTCACTGCAACCTCCCCCCTACCCCTGAGTTCAAGCGATTCTCCTGCCTCAGCCTGCTGAGTAGT 1628
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1629 TGGGATTACAGGCGCCCACCACCATGCCCAGCTAATTTTTGTGTTTTTATTGGAGGTGGGGTGTCACTATGTTG 1702
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1703 GCTCAGCTGATTTCAAATTCCTGACCTCAAGTGATCCACCTGCCTTAGCCTCCCAAAGTGCTGGGATTACAGGC 1776
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1777 ATGAGCCACTGCACCTGGCTATATTTACATTTAATAGAAACATATCTAGCATATGTATATGTGATTTTTTTTTT 1850
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1851 TTTTTTGAGACCGAGTCTCACTCTGTCACCAGGCTGGAGTGCAGTGGTGCGATCTTGGCTCATGGCAACCTCTG 1924
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1925 CCTCCCAGGTTCAAGCGATTGTCCTGCCTCAGTCTCCTGAGTAGCTGGGACTACAGGTGTGCACCAACATGCCC 1998
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1999 AGCTAATTTTTTATATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGATGGTCTCGATCTCTTGACCTT 2072
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 2073 GTGTTCCACCCGCCTTGGCCTCCCAAAGTGCTGGAATTACAGGCATGAGCCACCGCGCCTGGCCTGTATATGTG 2146
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 2147 ATTTCTAAAAAATAGATGCATGCATATGTTAACATTGAATAGTCAATCACTAGATGAAGATGCTCTCTACCATG 2220
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 2221 GTTTAGATTGCAAGTGTACTTTATACCATTGTTTCAACTTCAACCTTTATTTTTGTATATATTTTTTCAGCTAC 2294
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 2295 TTAAACTGTTCATGAATAGGCGTACTTTCTGTATTTAAAAATGGCCCCTCAAGCACCGTTAATTTACATTCCAG 2368
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 2369 TTATTTACATGATAATTCATGACATTCTGAAACTTGCCTGTATATTATCTGAAAAATGGATTTCTTGAGCAAAA 2442
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 2443 GATCTGTTTATTGTATGTAAGGAAAAATTTTACCTGAAAACAAACAAACAAACCCTAAAACTCAGCACCACTAC 2516
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 2517 CATTTCCAGAAGCTTTTTTAACAAGTGAATATTTTTTACATAATGGATAATAAATGGTATTTATTCATCATGAT 2590
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 2591 TTTCTAAGTAATGCTTATCAGCCCCTTCAGTGGTGTTATTCTAACAAAATGAATACATTACAAATTATTAAGTT 2664
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 2665 AGCTTTTCAGAGTTTTAATATAGAAGTTACTAGCACTGACACACTGATTTTGAAATGTTTCAAAATGAGTAGAT 2738
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 2739 ATGATTAGATCCTTTACCTTTTAATATCTAGTTTTTCCAAAAATGATAGTAATATCTTTTGAAGAACTATGCTT 2812
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 2813 TTTCAAAAGCAAAATCAACTCTGTATAATAGCACATTCTCTACTTTTTAAAGATCAGAAATGCTAGAATTCTTG 2886
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 2887 ACTTTTGTGTATGGGTAGTAAATCTAGCTCACTGAAAATCAGAGTGAAACGCCTTTACATTTGTGCGGATAGAG 2960
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 2961 AAGTTAACTCTCCCTCATATGTCACTGTGCTACCATAATCCCTACATTTTCTGTCTGTTCTAGTCTAAGAATAT 3034
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 3035 TGTTATAGATGGAAGTTAGGACCATTAGCCCACAGATGCATGTATTCTCTCAGACATACCGGTGTAGATGCTAT 3108
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 3109 ATTTCTGATGTCTTCTTAATGTCTGTGAAAGCAACTGGCATCTACAATAAATCACACTTAGAGCTGGTTAGAGG 3182
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 3183 ACTCCTTCACTTTTGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAGTGATGGT 3256
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 3257 GGCCACGTGCCTCGTTGCTATTTTTAAAGTAATATTCAGATGTGGTTTTAAATTTAGATTATGTATTCCTTTTG 3330
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 3331 AAACATAAGAAAAACATTTAAACCTATGCTGAAAATACGATAAAAGAAAAACAACTCCAATATGCTAAAAGTTA 3404
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 3405 AATATGGTATTTAAGAAAATAGTCATGTATGCAATTGAGAAAGTCTATAATTTATTTTACAGAAAAGCTGGAAG 3478
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 3479 ATTATGACTAGATATGGAAATATTTTTTCTGAATTTTTTTTTATATTTCCTCCGACTTACCTCTTTTTGAAAAG 3552
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 3553 AGAGTTTTTATTAAGTGAACCATCACGATATTGGCTGAAAAGTTCTACATTCTATTATTGTATTGTAACACACA 3626
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 3627 TGTATTGATGATTTTCATTAAGAGTTTCAGATTAACTTTGAAAAATATTCCACATGGTAATCTTATAAATTCTG 3700
Query 1177 -------------------------------------------------------------- 1176
Sbjct 3701 TTTAATTACATCTGTAAATATTATGTGTGTGATAGTATTCAATAAAGTAAAATCAAATTGTC 3762
