Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00202
- Subject:
- XM_006497642.3
- Aligned Length:
- 1560
- Identities:
- 993
- Gaps:
- 459
Alignment
Query 1 ATGTCCTCCTCCTCCTACGCCAAGAACGGGACCGCGGACGGGCCGCACTCCCCCACCTCGCAGGTGGCCCGAGG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CACCACAACCCGGAGGAGCAGGTTGAAAAGATCCGATGGCAGCACCACTTCGACCAGCTTCATCCTCAGACAGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GTTCAGCGGATTCCTACACAAGCAGGCCGTCTGACTCCGATGTCTCTTTGGAAGAGGACCGGGAAGCAATTCGA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CAGGAGAGAGAACAGCAAGCAGCTATCCAGCTTGAGAGAGCAAAGTCCAAACCTGTAGCATTTGCCGTGAAGAC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AAATGTGAGCTACTGCGGCGCCCTGGACGAGGATGTGCCTGTTCCAAGCACAGCTATCTCCTTTGATGCTAAAG 370
|||||||.|||||.||||||||.|||||||||||.||.||.|
Sbjct 1 --------------------------------ATGTGCCCGTTCCCAGCACAGCCATCTCCTTTGACGCCAAGG 42
Query 371 ACTTTCTACATATTAAAGAGAAATATAACAATGATTGGTGGATAGGAAGGCTGGTGAAAGAGGGCTGTGAAATT 444
|||||||.||.||||||||
Sbjct 43 ACTTTCTTCACATTAAAGA------------------------------------------------------- 61
Query 445 GGCTTCATTCCAAGTCCACTCAGATTGGAGAACATACGGATCCAGCAAGAACAAAAAAGAGGACGTTTTCACGG 518
Sbjct 62 -------------------------------------------------------------------------- 61
Query 519 AGGGAAATCAAGTGGAAATTCTTCTTCAAGTCTTGGAGAAATGGTATCTGGGACATTCCGAGCAACTCCCACAT 592
|||||||.||||||||.|||||.||.|||||.||||||||||||||.||.|||||||||||||||||||||.
Sbjct 62 --GGAAATCGAGTGGAAACTCTTCCTCCAGTCTGGGAGAAATGGTATCAGGAACATTCCGAGCAACTCCCACAA 133
Query 593 CAACAGCAAAACAGAAGCAAAAAGTGACGGAGCACATTCCTCCTTACGATGTTGTACCGTCAATGCGTCCGGTG 666
|||||||||||||||||||.|||||||||||||||||||||||.||.||.||.||.||||||||||||||.|||
Sbjct 134 CAACAGCAAAACAGAAGCAGAAAGTGACGGAGCACATTCCTCCGTATGACGTCGTGCCGTCAATGCGTCCTGTG 207
Query 667 GTGTTAGTGGGGCCGTCACTGAAAGGTTACGAGGTAACAGACATGATGCAGAAAGCCCTCTTTGATTTCCTGAA 740
||||||||||||||.||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 208 GTGTTAGTGGGGCCATCACTGAAAGGTTATGAGGTAACAGACATGATGCAGAAAGCCCTCTTTGATTTCCTGAA 281
Query 741 GCACAGGTTTGATGGGAGGATTTCAATAACGAGAGTGACAGCTGACATTTCTCTTGCTAAGAGGTCTGTCCTAA 814
|||||||||||||||||||||.||||||||.||||||||||||||||||||||||||||||||.||||||||.|
Sbjct 282 GCACAGGTTTGATGGGAGGATATCAATAACAAGAGTGACAGCTGACATTTCTCTTGCTAAGAGATCTGTCCTCA 355
Query 815 ATAATCCCAGCAAGAGAGCAATAATTGAACGTTCGAACACCCGGTCCAGCTTAGCGGAAGTACAAAGTGAAATT 888
|.|||||.||||||||||||||||||||||||||.||||||.|.||||||||||||||||||||||||||||||
Sbjct 356 ACAATCCTAGCAAGAGAGCAATAATTGAACGTTCCAACACCAGATCCAGCTTAGCGGAAGTACAAAGTGAAATT 429
Query 889 GAAAGAATCTTTGAGTTGGCAAGATCTTTGCAACTGGTTGTTCTTGATGCAGACACCATCAATCACCCAGCACA 962
||||||||.||||||||||||||||||||||||.||||||||||||||||||||||||||||.|||||||||||
Sbjct 430 GAAAGAATTTTTGAGTTGGCAAGATCTTTGCAATTGGTTGTTCTTGATGCAGACACCATCAACCACCCAGCACA 503
Query 963 ACTTATAAAGACTTCCTTAGCACCAATTATTGTTCATGTAAAAGTCTCATCTCCAAAGGTTTTACAGCGGTTGA 1036
.||.||||||||.|||||||||||.||.||.||.||.||.||.|||||.||.||||||||||||||||||.|||
Sbjct 504 GCTGATAAAGACATCCTTAGCACCCATCATCGTCCACGTGAAGGTCTCGTCCCCAAAGGTTTTACAGCGGCTGA 577
Query 1037 TTAAATCTAGAGGAAAGTCACAAAGTAAACACTTGAATGTTCAACTGGTGGCAGCTGATAAACTTGCACAATGC 1110
||||.||.|||||||||||.|||||.||||||||||||||||||||||||||.||.||||||||.||.||.|||
Sbjct 578 TTAAGTCCAGAGGAAAGTCCCAAAGCAAACACTTGAATGTTCAACTGGTGGCGGCCGATAAACTGGCCCAGTGC 651
Query 1111 CCCCCAGAAATGTTTGATGTTATATTGGATGAAAATCAGCTTGAGGATGCATGTGAACATCTAGGGGAGTACCT 1184
||.||.||||||||||||||||||||.|||||.|||||.|||||||||||.|||||||||||.||.||||||||
Sbjct 652 CCGCCTGAAATGTTTGATGTTATATTAGATGAGAATCAACTTGAGGATGCCTGTGAACATCTGGGAGAGTACCT 725
Query 1185 GGAGGCGTACTGGCGTGCCACCCACACAACCAGTAGCACACCCATGACCCCGCTGCTGGGAAGGAATTTGGGCT 1258
||||||.||||||||||||||||||||.|.|||||||||.||.||||||||..|.|||||..||||..||||||
Sbjct 726 GGAGGCATACTGGCGTGCCACCCACACGAGCAGTAGCACCCCTATGACCCCATTACTGGGGCGGAACGTGGGCT 799
Query 1259 CCACGGCACTCTCACCATATCCCACAGCAATTTCTGGGTTACAGAGTCAGCGAATGAGGCACAGCAACCACTCC 1332
||||.||.|||||||||||||||||||||||.|||||.||||||||||||||||||||.|||||||||||.||.
Sbjct 800 CCACAGCCCTCTCACCATATCCCACAGCAATCTCTGGATTACAGAGTCAGCGAATGAGACACAGCAACCATTCT 873
Query 1333 ACAGAGAACTCTCCAATTGAAAGACGAAGTCTAATGACCTCTGATGAAAATTATCACAATGAAAGGGCTCGGAA 1406
||||||||.||||||||||||||||||||.|||||||||||.|||||||||||.||||||||.|||||.||.||
Sbjct 874 ACAGAGAATTCTCCAATTGAAAGACGAAGCCTAATGACCTCGGATGAAAATTACCACAATGAGAGGGCCCGCAA 947
Query 1407 GAGTAGGAACCGCTTGTCTTCCAGTTCTCAGCATAGCCGAGATCATTACCCTCTTGTGGAAGAAGATTACCCTG 1480
||||||||||||||||||||||||.||.|||||.||||||||.||.||||||||.|||||||||||||||||.|
Sbjct 948 GAGTAGGAACCGCTTGTCTTCCAGCTCCCAGCACAGCCGAGACCACTACCCTCTGGTGGAAGAAGATTACCCGG 1021
Query 1481 ACTCATACCAGGACACTTACAAACCCCATAGGAACCGAGGATCACCTGGGGGATATAGCCATGACTCCCGACAT 1554
||||.||||||||||||||.||.||||||||||||||||||||.||.|||||.|..||||||||||||||||||
Sbjct 1022 ACTCGTACCAGGACACTTATAAGCCCCATAGGAACCGAGGATCGCCCGGGGGGTGCAGCCATGACTCCCGACAT 1095
Query 1555 AGGCTT 1560
||||||
Sbjct 1096 AGGCTT 1101
