Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00303
- Subject:
- NR_038133.2
- Aligned Length:
- 2342
- Identities:
- 1080
- Gaps:
- 1256
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGGAGACGCTATCGCAAGATGGCGTCTGCGAGGCCGCGGGATGCGGAGTGAGCGCGCCCCGCCGGGGGCTGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGAGGCTGCTGCTGCTCTCCCCGTCGCCGCCGCCGCCGCCGCCAGTGCGGCGCCGCCTCTCCGCCAGCCACTG 148
Query 1 ----------ATGGC-CCTGACCCTGTTTGATACAGATGAATATAGACCTCCTGTTTGGAAATCTTACTTATAT 63
|.|.| |||| |||....|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CGCCGCGGCCAAGCCTCCTG--CCTCGCAGATACAGATGAATATAGACCTCCTGTTTGGAAATCTTACTTATAT 220
Query 64 CAGCTACAACAGGAAGCCCCTCATCCTCGAAGAATTACCTGTACTTGCGAGGTGGAAAACAGACCAAAGTATTA 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 221 CAGCTACAACAGGAAGCCCCTCATCCTCGAAGAATTACCTGTACTTGCGAGGTGGAAAACAGACCAAAGTATTA 294
Query 138 TGGAAGAGAGTTTCATGGCATGATCTCCAGAGAAGCAGCCGACCAGCTCTTGATTGTGGCTGAGGGGAGCTACC 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 295 TGGAAGAGAGTTTCATGGCATGATCTCCAGAGAAGCAGCCGACCAGCTCTTGATTGTGGCTGAGGGGAGCTACC 368
Query 212 TCATCCGGGAGAGCCAGCGGCAGCCAGGGACCTACACTTTGGCTTTAAGATTTGGAAGTCAAACCAGAAACTTC 285
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 369 TCATCCGGGAGAGCCAGCGGCAGCCAGGGACCTACACTTTGGCTTTAA-------------------------- 416
Query 286 AGGCTCTACTACGATGGCAAGCACTTTGTTGGGGAGAAACGCTTTGAGTCCATCCACGATCTGGTGACTGATGG 359
Sbjct 417 -------------------------------------------------------------------------- 416
Query 360 CTTGATTACTCTCTATATTGAAACCAAGGCAGCAGAATACATTGCCAAGATGACGATAAACCCAATTTATGAGC 433
Sbjct 417 -------------------------------------------------------------------------- 416
Query 434 ACGTAGGATACACAACCTTAAACAGAGAGCCAGCATACAAAAAACATATGCCAGTCCTGAAAGAGACACATGAT 507
Sbjct 417 -------------------------------------------------------------------------- 416
Query 508 GAGAGAGATTCTACAGGCCAGGATGGGGTGTCAGAGAAAAGGTTGACATCACTTGTTAGAAGAGCAACTCTGAA 581
|||||||||||||||||||||||||||||||||
Sbjct 417 -----------------------------------------GTTGACATCACTTGTTAGAAGAGCAACTCTGAA 449
Query 582 AGAAAACGAGCAAATTCCAAAATATGAAAAGATTCACAATTTCAAGGTGCATACATTCAGAGGGCCACACTGGT 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 450 AGAAAACGAGCAAATTCCAAAATATGAAAAGATTCACAATTTCAAGGTGCATACATTCAGAGGGCCACACTGGT 523
Query 656 GTGAATACTGTGCCAACTTTATGTGGGGTCTCATTGCTCAGGGAGTGAAATGTGCAGATTGTGGTTTGAATGTT 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 524 GTGAATACTGTGCCAACTTTATGTGGGGTCTCATTGCTCAGGGAGTGAAATGTGCAGATTGTGGTTTGAATGTT 597
Query 730 CATAAGCAGTGTTCCAAGATGGTCCCAAATGACTGTAAGCCAGACTTGAAGCATGTCAAAAAGGTGTACAGCTG 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 CATAAGCAGTGTTCCAAGATGGTCCCAAATGACTGTAAGCCAGACTTGAAGCATGTCAAAAAGGTGTACAGCTG 671
Query 804 TGACCTTACGACGCTCGTGAAAGCACATACCACTAAGCGGCCAATGGTGGTAGACATGTGCATCAGGGAGATTG 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 672 TGACCTTACGACGCTCGTGAAAGCACATACCACTAAGCGGCCAATGGTGGTAGACATGTGCATCAGGGAGATTG 745
Query 878 AGTCTAGAGGTCTTAATTCTGAAGGACTATACCGAGTATCAGGATTTAGTGACCTAATTGAAGATGTCAAGATG 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 746 AGTCTAGAGGTCTTAATTCTGAAGGACTATACCGAGTATCAGGATTTAGTGACCTAATTGAAGATGTCAAGATG 819
Query 952 GCTTTCGACAGAGATGGTGAGAAGGCAGATATTTCTGTGAACATGTATGAAGATATCAACATTATCACTGGTGC 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 820 GCTTTCGACAGAGATGGTGAGAAGGCAGATATTTCTGTGAACATGTATGAAGATATCAACATTATCACTGGTGC 893
Query 1026 ACTTAAACTGTACTTCAGGGATTTGCCAATTCCACTCATTACATATGATGCCTACCCTAAGTTTATAGAATCTG 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 894 ACTTAAACTGTACTTCAGGGATTTGCCAATTCCACTCATTACATATGATGCCTACCCTAAGTTTATAGAATCTG 967
Query 1100 CCAAAATTATGGATCCGGATGAGCAATTGGAAACCCTTCATGAAGCACTGAAACTACTGCCACCTGCTCACTGC 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 968 CCAAAATTATGGATCCGGATGAGCAATTGGAAACCCTTCATGAAGCACTGAAACTACTGCCACCTGCTCACTGC 1041
Query 1174 GAAACCCTCCGGTACCTCATGGCACATCTAAAGAGAGTGACCCTCCACGAAAAGGAGAATCTTATGAATGCAGA 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1042 GAAACCCTCCGGTACCTCATGGCACATCTAAAGAGAGTGACCCTCCACGAAAAGGAGAATCTTATGAATGCAGA 1115
Query 1248 GAACCTTGGAATCGTCTTTGGACCCACCCTTATGAGATCTCCAGAACTAGACGCCATGGCTGCATTGAATGATA 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1116 GAACCTTGGAATCGTCTTTGGACCCACCCTTATGAGATCTCCAGAACTAGACGCCATGGCTGCATTGAATGATA 1189
Query 1322 TACGGTATCAGAGACTGGTGGTGGAGCTGCTTATCAAAAACGAAGACATTTTATTT------------------ 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1190 TACGGTATCAGAGACTGGTGGTGGAGCTGCTTATCAAAAACGAAGACATTTTATTTTAAATTTTTAATTTGAGG 1263
Query 1378 -------------------------------------------------------------------------- 1377
Sbjct 1264 GGAAAAGAAATGTTTTACAGATGAAGGAATGTTTTATAGTAATTTAATTTGCTCCTGTAGCTGCATTATTTCTT 1337
Query 1378 -------------------------------------------------------------------------- 1377
Sbjct 1338 GATTAGAGGTTTGGGCATATAACCAGATTAAAGTGAAGGAACTTTCTGTTGTTTTTGTAGCACCGCTCAGCTGT 1411
Query 1378 -------------------------------------------------------------------------- 1377
Sbjct 1412 CTTGTAAAACAGTGAACACACGCTTTCTGGTTCTAGTAATCCTGGGTGTTTATCACGTTCAGAGAAACTCAAGC 1485
Query 1378 -------------------------------------------------------------------------- 1377
Sbjct 1486 TATTGCATGATTAGCCCCCTATCTGGCAAGGAAACCCCATACAGAAGAAACAACAAACCTGCGCCTGCACCGCC 1559
Query 1378 -------------------------------------------------------------------------- 1377
Sbjct 1560 TCTGCGTCCTGGGTAGTCTGTGCTTGTAATCCAGCATGTTTCACAGAGTAAGCCTGTTGTGACTTTGCTTTTGG 1633
Query 1378 -------------------------------------------------------------------------- 1377
Sbjct 1634 GGTCTATGTCATTGGTTTCTGATGCTTGTACAAACACGCACACACAAATGGATAAAACAGCACCTCTGGCTGTT 1707
Query 1378 -------------------------------------------------------------------------- 1377
Sbjct 1708 ACATTACCATAAACCATATCACATGCCTACATTTTACAAATGATTTCTGGTTTCTCTTAGTTCTTCTCTAACAT 1781
Query 1378 -------------------------------------------------------------------------- 1377
Sbjct 1782 AGTACTTTCTTTCCAGCAAAAGCAAAATGTGTTTTCAGATTTGTTACTTTAATAAAGGTTATCCATACCAATAA 1855
Query 1378 -------------------------------------------------------------------------- 1377
Sbjct 1856 AAAGTGTACAACACAGCATTTTCTGTTAAATTATTATTGGTTTTCAGTTGTAATTTGGTATTTTTTCTGGCATG 1929
Query 1378 -------------------------------------------------------------------------- 1377
Sbjct 1930 CGTTTATTAATTTATTAAATTGGCTTTTAGAAATAAAAAATATTGATAGCTTACTTTTTTCTCATAAGAATATT 2003
Query 1378 ------------------------------------------------ 1377
Sbjct 2004 CGGGAAAATGTGTTTGGCCATTTATTAAATACTGAGTACTTCTTCTGA 2051
