Nucleotide Global Alignment

Description

• Query: ccsbBroad304_00379
• Subject: XM_017316660.1
• Aligned Length: 1264
• Identities: 965
• Gaps: 182

Alignment

Query    1  ATGGAGCTACGTGTGGGGAACAAGTACCGCCTGGGACGGAAGATCGGGAGCGGGTCCTTCGGAGATATCTACCT  74
            ||||||.|.||||||||.||.|||||.||||||||.||.||||||||.||.||.|||||.|||||.||||||||
Sbjct    1  ATGGAGTTGCGTGTGGGAAATAAGTATCGCCTGGGCCGAAAGATCGGCAGTGGCTCCTTTGGAGACATCTACCT  74

Query   75  GGGTGCCAACATCGCCTCTGGTGAGGAAGTCGCCATCAAGCTGGAGTGTGTGAAGACAAAGCACCCCCAGCTGC  148
            ||||||||||||.|||||||||||||||||.|||||||||||.||.|||||||||||.||.||.||||||||.|
Sbjct   75  GGGTGCCAACATTGCCTCTGGTGAGGAAGTAGCCATCAAGCTCGAATGTGTGAAGACGAAACATCCCCAGCTCC  148

Query  149  ACATCGAGAGCAAGTTCTACAAGATGATGCAGGGTGGCGTGGGGATCCCGTCCATCAAGTGGTGCGGAGCTGAG  222
            ||||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||.||||||
Sbjct  149  ACATCGAGAGCAAGTTCTACAAGATGATGCAGGGCGGAGTGGGGATCCCGTCCATCAAGTGGTGCGGGGCTGAG  222

Query  223  GGCGACTACAACGTGATGGTCATGGAGCTGCTGGGGCCTAGCCTCGAGGACCTGTTCAACTTCTGTTCCCGCAA  296
            ||.|||||.|||||||||||||||||||||||||||||.|||||.||||||||.|||||||||||||||||.||
Sbjct  223  GGAGACTATAACGTGATGGTCATGGAGCTGCTGGGGCCCAGCCTGGAGGACCTCTTCAACTTCTGTTCCCGGAA  296

Query  297  ATTCAGCCTCAAGACGGTGCTGCTCTTGGCCGACCAGATGATCAGCCGCATCGAGTATATCCACTCCAAGAACT  370
            .|||||||||||||||||||||.|..|||||||||||||||||||||||||||||||.||.|||||||||||||
Sbjct  297  GTTCAGCCTCAAGACGGTGCTGTTGCTGGCCGACCAGATGATCAGCCGCATCGAGTACATACACTCCAAGAACT  370

Query  371  TCATCCACCGGGACGTCAAGCCCGACAACTTCCTCATGGGGCTGGGGAAGAAGGGCAACCTGGTCTACATCATC  444
            |||||||||||||.||.|||||||||||||||||||||||.|||||||||||.|||||||||||.||||||||.
Sbjct  371  TCATCCACCGGGATGTGAAGCCCGACAACTTCCTCATGGGCCTGGGGAAGAAAGGCAACCTGGTGTACATCATT  444

Query  445  GACTTCGGCCTGGCCAAGAAGTACCGGGACGCCCGCACCCACCAGCACATTCCCTACCGGGAAAACAAGAACCT  518
            ||||||||||||||||||||||||||.||.||||||||.||||||||.||||||||||||||||||||||||||
Sbjct  445  GACTTCGGCCTGGCCAAGAAGTACCGCGATGCCCGCACACACCAGCATATTCCCTACCGGGAAAACAAGAACCT  518

Query  519  GACCGGCACGGCCCGCTACGCTTCCATCAACACGCACCTGGGCATTGAGCAAAGCCGTCGAGATGACCTGGAGA  592
            |||||||||.||||||||.||.||.||||||||.|||||||||||||||||||||||||||||||||||.||||
Sbjct  519  GACCGGCACTGCCCGCTATGCCTCTATCAACACCCACCTGGGCATTGAGCAAAGCCGTCGAGATGACCTAGAGA  592

Query  593  GCCTGGGCTACGTGCTCATGTACTTCAACCTGGGCTCCCTGCCCTGGCAGGGGCTCAAAGCAGCCACCAAGCGC  666
            ||.|||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.
Sbjct  593  GCTTGGGCTATGTGCTCATGTACTTCAACCTGGGCTCCCTGCCCTGGCAGGGCCTCAAAGCAGCCACCAAGCGT  666

Query  667  CAGAAGTATGAACGGATCAGCGAGAAGAAGATGTCAACGCCCATCGAGGTCCTCTGCAAAGGCTATCCCTCCGA  740
            ||||||||.||.|||||.|||||||||||||||||||||||.|||||||||||||||||||||||.||||||||
Sbjct  667  CAGAAGTACGAGCGGATTAGCGAGAAGAAGATGTCAACGCCAATCGAGGTCCTCTGCAAAGGCTACCCCTCCGA  740

Query  741  ATTCTCAACATACCTCAACTTCTGCCGCTCCCTGCGGTTTGACGACAAGCCCGACTACTCTTACCTACGTCAGC  814
            .||||||||||||||||||||||||||||||||||||||.||.||.|||||.||||||||.|||||.||.||||
Sbjct  741  GTTCTCAACATACCTCAACTTCTGCCGCTCCCTGCGGTTCGATGATAAGCCTGACTACTCCTACCTGCGCCAGC  814

Query  815  TCTTCCGCAACCTCTTCCACCGGCAGGGCTTCTCCTATGACTACGTCTTTGACTGGAACATGCTGAAATTCGGT  888
            |||||||.||.|||||.|||||||||||.||||||||.|||||||||||.||||||||||||||.|||||||| 
Sbjct  815  TCTTCCGAAATCTCTTTCACCGGCAGGGTTTCTCCTACGACTACGTCTTCGACTGGAACATGCTCAAATTCGG-  887

Query  889  GCAGCCCGGAATCC-CGAGGATGTGGACCGGG---AGCGGCGAGAACACGAACGCGAGGAGAGGATGGGGCAGC  958
                   ||..||| ||||        ||.||   |||..|||||..||||                    |||
Sbjct  888  -------GGCTTCCTCGAG--------CCAGGCTCAGCCCCGAGACAACGA--------------------AGC  926

Query  959  TACGGGGGTCCGCGACCCGAGCCCTGCCC----CCT-------GGCCC----ACCCACGGGGGCCACTGCCAAC  1017
            |     ..|.|||.||||...|||.||||    |||       |||||    ||.|||     |||||   .||
Sbjct  927  T-----CTTGCGCCACCCTGCCCCCGCCCTTGGCCTTGCGCTGGGCCCGCATACTCAC-----CCACT---TAC  987

Query 1018  CGGCTCCGCAGTGCCGCCGAGCCCGTGGCTTCCACGCCAGCCTCCCGCATCCAGCCGGCTGGCAATACTTCTCC  1091
            .|        ||||| |.|.||||.|||                  |||.|||             |...|.||
Sbjct  988  TG--------GTGCC-CGGCGCCCCTGG------------------GCACCCA-------------AGGACCCC  1021

Query 1092  CAGAGCGATCTCGCGGGTCGACCGGGAGAGGA--AGGTGAGTATGAGGCTGCACAGGGGTGCGCCCGCCAACGT  1163
            ||||             |.|.||||..|||||  |||||                             .|||..
Sbjct 1022  CAGA-------------TAGGCCGGTGGAGGAGGAGGTG-----------------------------GAACAA  1053

Query 1164  CT-CCTCCTCAGACCTCACTGGGCGGCAAGAGGTCTCCCGGATCCCAGCCTCACAGACAGGACCGCCAGTATTC  1236
            || ||.|||||.|..| |.|    |||..|.|||||   |||       |||     ||||.|| ||||  |||
Sbjct 1054  CTGCCCCCTCAAAGAT-ATT----GGCCTGTGGTCT---GGA-------CTC-----CAGGGCC-CCAG--TTC  1104

Query 1237  CGTCTC  1242
                  
Sbjct 1105  ------  1104