Nucleotide Global Alignment

Description

Query:
ccsbBroad304_00412
Subject:
NM_001190484.3
Aligned Length:
1526
Identities:
384
Gaps:
1126

Alignment

Query    1  ATGGACCTCATCCCAAATTTGGCGGTGGAAACCTGGCTTCTCCTGGCTGTCAGCCTGGTGCTCCTCTATCTATA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGACCTCATCCCAAATTTGGCGGTGGAAACCTGGCTTCTCCTGGCTGTCAGCCTGGTGCTCCTCTATCTATA  74

Query   75  TGGGACCCGTACACATGGACTTTTTAAGAGACTGGGAATTCCAGGGCCCACACCTCTGCCTTTGTTGGGAAATG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TGGGACCCGTACACATGGACTTTTTAAGAGACTGGGAATTCCAGGGCCCACACCTCTGCCTTTGTTGGGAAATG  148

Query  149  TTTTGTCCTATCGTCAGGGTCTCTGGAAATTTGACACAGAGTGCTATAAAAAGTATGGAAAAATGTGGGGAACG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TTTTGTCCTATCGTCAGGGTCTCTGGAAATTTGACACAGAGTGCTATAAAAAGTATGGAAAAATGTGGGGAACG  222

Query  223  TATGAAGGTCAACTCCCTGTGCTGGCCATCACAGATCCCGACGTGATCAGAACAGTGCTAGTGAAAGAATGTTA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TATGAAGGTCAACTCCCTGTGCTGGCCATCACAGATCCCGACGTGATCAGAACAGTGCTAGTGAAAGAATGTTA  296

Query  297  TTCTGTCTTCACAAATCGAAGGTCTTTAGGCCCAGTGGGATTTATGAAA-----AGTGCCATCTCTTTAGCTGA  365
            ||||||||||||||||||||                 ||||||.||.||     ||..|||||          |
Sbjct  297  TTCTGTCTTCACAAATCGAA-----------------GGATTTGTGCAACGACCAGCACCATC----------A  343

Query  366  GGATGAAGAATGGAAGAGAATACGGTCATTGCTGTCTCCAACCTTCACCAGCGGAAAACTCAAGGAGATGT---  436
            .||||.|||               ..||||           ||.|||||                  ||||   
Sbjct  344  AGATGCAGA---------------CCCATT-----------CCGTCACC------------------ATGTGGC  373

Query  437  TCCCCATCAT--TGCC---CAGT------ATGGAG-ATGTATTGGTGAGAAACTTGAGGCGGGAAGCAGAGAAA  498
            ||||  ||.|  ||.|   ||||      |||||| .|||.||..|      ||.                   
Sbjct  374  TCCC--TCCTGCTGTCCTACAGTCACAACATGGAGTTTGTCTTTTT------CTC-------------------  420

Query  499  GGCAAGCCTGTCACCTTGAAAGACATCTTTGGGGCCTACAGCATGGATGTGATTACTGGCACATCATTTGGAGT  572
                                                                                      
Sbjct  421  --------------------------------------------------------------------------  420

Query  573  GAACATCGACTCTCTCAACAATCCACAAGACCCCTTTGTGGAGAGCACTAAGAAGTTCCTAAAATTTGGTTTCT  646
                                                                                      
Sbjct  421  --------------------------------------------------------------------------  420

Query  647  TAGATCCATTATTTCTCTCAATAATACTCTTTCCATTCCTTACCCCAGTTTTTGAAGCATTAAATGTCTCTCTG  720
                                                                                      
Sbjct  421  --------------------------------------------------------------------------  420

Query  721  TTTCCAAAAGATACCATAAATTTTTTAAGTAAATCTGTAAACAGAATGAAGAAAAGTCGCCTCAACGACAAACA  794
                                                                                      
Sbjct  421  --------------------------------------------------------------------------  420

Query  795  AAAGCACCGACTAGATTTCCTTCAGCTGATGATTGACTCCCAGAATTCGAAAGAAACTGAGTCCCACAAAGCTC  868
                                                                                      
Sbjct  421  --------------------------------------------------------------------------  420

Query  869  TGTCTGATCTGGAGCTCGCAGCCCAGTCAATAATCTTCATTTTTGCTGGCTATGAAACCACCAGCAGTGTTCTT  942
                                                                                      
Sbjct  421  --------------------------------------------------------------------------  420

Query  943  TCCTTCACTTTATATGAACTGGCCACTCACCCTGATGTCCAGCAGAAACTGCAAAAGGAGATTGATGCAGTTTT  1016
                                                                                      
Sbjct  421  --------------------------------------------------------------------------  420

Query 1017  GCCCAATAAGGCACCACCTACCTATGATGCCGTGGTACAGATGGAGTACCTTGACATGGTGGTGAATGAAACAC  1090
                                                                                      
Sbjct  421  --------------------------------------------------------------------------  420

Query 1091  TCAGATTATTCCCAGTTGCTATTAGACTTGAGAGGACTTGCAAGAAAGATGTTGAAATCAATGGGGTATTCATT  1164
                                                                                      
Sbjct  421  --------------------------------------------------------------------------  420

Query 1165  CCCAAAGGGTCAATGGTGGTGATTCCAACTTATGCTCTTCACCATGACCCAAAGTACTGGACAGAGCCTGAGGA  1238
                                                                                      
Sbjct  421  --------------------------------------------------------------------------  420

Query 1239  GTTCCGCCCTGAAAGGTTCAGTAAGAAGAAGGACAGCATAGATCCTTACATATACACACCCTTTGGAACTGGAC  1312
                                                                                      
Sbjct  421  --------------------------------------------------------------------------  420

Query 1313  CCAGAAACTGCATTGGCATGAGGTTTGCTCTCATGAACATGAAACTTGCTCTAATCAGAGTCCTTCAGAACTTC  1386
                                                                                      
Sbjct  421  --------------------------------------------------------------------------  420

Query 1387  TCCTTCAAACCTTGTAAAGAAACACAGATCCCCTTGAAATTAGACACGCAAGGACTTCTTCAACCAGAAAAACC  1460
                                                                                      
Sbjct  421  --------------------------------------------------------------------------  420

Query 1461  CATTGTTCTAAAGGTGGATTCAAGAGATGGAACCCTAAGTGGAGAA  1506
                                                          
Sbjct  421  ----------------------------------------------  420

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