Nucleotide Global Alignment

Description

Query:
ccsbBroad304_00446
Subject:
XM_017318488.1
Aligned Length:
1550
Identities:
806
Gaps:
640

Alignment

Query    1  ATGGCGGATGCGGAAGTAATTATTTTGCCAAAGAAACATAAGAAGAAAAAGGAGCGGAAGTCATTGCCAGAAGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGATGTAGCCGAAATACAACACGCTGAAGAATTTCTTATCAAACCTGAATCCAAAGTTGCTAAGTTGGACACGT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CTCAGTGGCCCCTTTTGCTAAAGAATTTTGATAAGCTGAATGTAAGGACAACACACTATACACCTCTTGCATGT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GGTTCAAATCCTCTGAAGAGAGAGATTGGGGACTATATCAGGACAGGTTTCATTAATCTTGACAAGCCCTCTAA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CCCCTCTTCCCATGAGGTGGTAGCCTGGATTCGACGGATACTTCGGGTGGAGAAGACAGGGCACAGTGGTACTC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TGGATCCCAAGGTGACTGGTTGTTTAATCGTGTGCATAGAACGAGCCACTCGCTTGGTGAAGTCACAACAGAGT  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  GCAGGCAAAGAGTATGTGGGGATTGTCCGGCTGCACAATGCTATTGAAGGGGGGACCCAGCTTTCTAGGGCCCT  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  AGAAACTCTGACAGGTGCCTTATTCCAGCGACCCCCACTTATTGCTGCAGTAAAGAGGCAGCTCCGAGTGAGGA  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  CCATCTACGAGAGCAAAATGATTGAATACGATCCTGAAAGAAGATTAGGAATCTTTTGGGTGAGTTGTGAGGCT  666
                             |||||.|||||.||||||||.|||||||||||||||||||||||.||.|||||.|||
Sbjct    1  -----------------ATGATAGAATATGATCCTGAGAGAAGATTAGGAATCTTTTGGGTAAGCTGTGAAGCT  57

Query  667  GGCACCTACATTCGGACATTATGTGTGCACCTTGGTTTGTTATTGGGAGTTGGTGGTCAGATGCAGGAGCTTCG  740
            ||||||||||||||||||.||||.||.||||||||.||||||.|||||||||||||||||||||||||.|||||
Sbjct   58  GGCACCTACATTCGGACACTATGCGTACACCTTGGCTTGTTACTGGGAGTTGGTGGTCAGATGCAGGAACTTCG  131

Query  741  GAGGGTTCGTTCTGGAGTCATGAGTGAAAAGGACCACATGGTGACAATGCATGATGTGCTTGATGCTCAGTGGC  814
            ||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||
Sbjct  132  GAGGGTGCGTTCTGGAGTCATGAGTGAAAAGGACCACATGGTGACAATGCATGATGTACTCGATGCTCAGTGGC  205

Query  815  TGTATGATAACCACAAGGATGAGAGTTACCTGCGGCGAGTTGTTTACCCTTTGGAAAAGCTGTTGACATCTCAT  888
            |||||||||||||.|||||||||||||||.|||||||.||||||||||||||||||||||||||||||||||||
Sbjct  206  TGTATGATAACCATAAGGATGAGAGTTACTTGCGGCGTGTTGTTTACCCTTTGGAAAAGCTGTTGACATCTCAT  279

Query  889  AAACGGCTGGTTATGAAAGACAGTGCAGTAAATGCCATCTGCTATGGGGCCAAGATTATGCTTCCAGGTGTTCT  962
            |||||.||||||||||||||.||||||||.|||||.||||||||||||||||||||.||||||||.|||.||||
Sbjct  280  AAACGTCTGGTTATGAAAGATAGTGCAGTGAATGCAATCTGCTATGGGGCCAAGATCATGCTTCCTGGTCTTCT  353

Query  963  TCGATATGAGGACGGCATTGAGGTCAATCAGGAGATTGTGGTTATCACCACCAAAGGAGAAGCAATCTGCATGG  1036
            |||||||||.||.||||||||||||||.||||||||||||||.||.||.||.||.||.|||||.||||||||||
Sbjct  354  TCGATATGAAGATGGCATTGAGGTCAACCAGGAGATTGTGGTCATTACTACTAAGGGGGAAGCTATCTGCATGG  427

Query 1037  CTATTGCATTAATGACCACAGCGGTCATCTCTACCTGCGACCATGGTATAGTAGCCAAGATCAAGAGAGTGATC  1110
            |.||||||||.|||||.|||||.||.||.||||||||.||||||||||||||||||||.||.|||||.||||||
Sbjct  428  CAATTGCATTGATGACTACAGCAGTGATTTCTACCTGTGACCATGGTATAGTAGCCAAAATAAAGAGGGTGATC  501

Query 1111  ATGGAGAGAGACACTTACCCTCGGAAGTGGGGTTTAGGTCCAAAGGCAAGTCAGAAGAAGCTGATGATCAAGCA  1184
            |||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct  502  ATGGAGAGAGACACTTATCCTCGCAAGTGGGGTTTAGGTCCAAAGGCAAGTCAGAAGAAGATGATGATCAAGCA  575

Query 1185  GGGCCTTCTGGACAAGCATGGGAAGCCCACAGACAGCACACCTGCCACCTGGAAGCAGGAGTATGTTGACTACA  1258
            |||||||||||||||||||||.||.||||||||||..||.||||||||.|||||.|||||.||..|||||||.|
Sbjct  576  GGGCCTTCTGGACAAGCATGGCAAACCCACAGACAATACCCCTGCCACATGGAAACAGGATTACATTGACTATA  649

Query 1259  GTGAGTCTGCCAA-AAAAGAGGTGGTTGCTGAAGTGGTAAAAGCCCCGCAGGTAGTTGCCGAAGCAG-------  1324
            ||||.||||.||| ||.|.| .|||||.|.||||..|||.|||||||.|||.|||.|||.|||||||       
Sbjct  650  GTGATTCTGGCAAGAACACA-CTGGTTACCGAAGCAGTACAAGCCCCTCAGTTAGCTGCTGAAGCAGTAAATGT  722

Query 1325  CAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATC  1398
            ||.|||     ||  |||||||.||.|||||||||||||||||.||||   |.|||.|||.|||.|||||    
Sbjct  723  CATAAA-----AA--GGAAGCGGGATAGTGAGAGTGAAAGTGATGAGA---CCCCAACAGTTCCCCAGTT----  782

Query 1399  AAGAAGGAAAAGAAGAAGAGTAAGAAGGACAAGAAGGCCAAAGCTGGTCTGGAGAGCGGGGCCGAGCCTGGAGA  1472
              ||||||||||||||||   ||||||||.||||||.|||||.|||..||.||.||.||||.|||..|||||||
Sbjct  783  --GAAGGAAAAGAAGAAG---AAGAAGGATAAGAAGCCCAAAACTGTGCTAGAAAGTGGGGGCGAAACTGGAGA  851

Query 1473  TGGGGACAGTGATACCACCAAGAAGAAGAAGAAGAAGAAGAAAGCAAAAGAGGTAGAATTGGTTTCTGAG  1542
            ||||||||..||.||||||   ||.|||||.|||||||||||||.|||||.|||||||..|.|.|||||.
Sbjct  852  TGGGGACAACGACACCACC---AAAAAGAAAAAGAAGAAGAAAGTAAAAGTGGTAGAAGAGATGTCTGAA  918