Nucleotide Global Alignment

Description

Query:
ccsbBroad304_00841
Subject:
XM_006509021.2
Aligned Length:
1658
Identities:
1076
Gaps:
427

Alignment

Query    1  ATGAGCTGGTCACCTTCCCTGACAACGCAGACATGTGGGGCCTGGGAAATGAAAGAGCGCCTTGGGACAGGGGG  74
            ||||||||||||||.|||||..||||.|||||||||||.|||||||||||||||||.|||||.|||||.|||||
Sbjct    1  ATGAGCTGGTCACCGTCCCTCCCAACCCAGACATGTGGAGCCTGGGAAATGAAAGAACGCCTGGGGACCGGGGG  74

Query   75  ATTTGGAAATGTCATCCGATGGCACAATCAGGAAACAGGTGAGCAGATTGCCATCAAGCAGTGCCGGCAGGAGC  148
            |||||||||.||||||||.|||||||||||||..||||||||.|||||.|||||||||||.|||||.|||||||
Sbjct   75  ATTTGGAAACGTCATCCGGTGGCACAATCAGGCGACAGGTGAACAGATCGCCATCAAGCAATGCCGACAGGAGC  148

Query  149  TCAGCCCCCGGAACCGAGAGCGGTGGTGCCTGGAGATCCAGATCATGAGAAGGCTGACCCACCCCAATGTGGTG  222
            |||||||...||||.||||.||.||||||||.||.||||||||||||||||||||||.|||.||||||||||||
Sbjct  149  TCAGCCCAAAGAACAGAGACCGCTGGTGCCTCGAAATCCAGATCATGAGAAGGCTGAACCATCCCAATGTGGTG  222

Query  223  GCTGCCCGAGATGTCCCTGAGGGGATGCAGAACTTGGCGCCCAATGACCTGCCCCTGCTGGCCATGGAGTACTG  296
            ||||||||.||||||||.|||||||||||||||.||||.||||||||..||||.||||||||||||||||||||
Sbjct  223  GCTGCCCGGGATGTCCCAGAGGGGATGCAGAACCTGGCACCCAATGATTTGCCACTGCTGGCCATGGAGTACTG  296

Query  297  CCAAGGAGGAGATCTCCGGAAG-TACCTGAACCAGTTTGAGAACTGCTGTGGTCTGCGGGAAGGTGCCATCCTC  369
            ||||||||||||||||| |||| |||.||||||||||.||||||||||||||.|||||||||||.||..||||.
Sbjct  297  CCAAGGAGGAGATCTCC-GAAGATACTTGAACCAGTTCGAGAACTGCTGTGGCCTGCGGGAAGGAGCTGTCCTT  369

Query  370  ACCTTGCTGAGTGACATTGCCTCTGCGCTTAGATACCTTCATGAAAACAGAATCATCCATCGGGATCTAAAGCC  443
            |||.|||||||||||||.||.||.||.||||||||||||||.||||||||||||||||||||.||.||.|||||
Sbjct  370  ACCCTGCTGAGTGACATCGCATCGGCTCTTAGATACCTTCACGAAAACAGAATCATCCATCGAGACCTGAAGCC  443

Query  444  AGAAAACATCGTCCTGCAGCAAGGAGAACAGAGGTTAATACACAAAATTATTGACCTAGGATATGCCAAGGAGC  517
            ||||||||||||.||||||||||||||..|.||.||||||||||||||||||||.|||||||||||||||||||
Sbjct  444  AGAAAACATCGTTCTGCAGCAAGGAGAGAAAAGATTAATACACAAAATTATTGATCTAGGATATGCCAAGGAGC  517

Query  518  TGGATCAGGGCAGTCTTTGCACATCATTCGTGGGGACCCTGCAGTACCTGGCCCCAGAGCTACTGGAGCAGCAG  591
            ||||||||||||||||.|||||.|||||.||||||||.|||||.||||||||.||||||||.||||||||||||
Sbjct  518  TGGATCAGGGCAGTCTGTGCACGTCATTTGTGGGGACTCTGCAATACCTGGCGCCAGAGCTTCTGGAGCAGCAG  591

Query  592  AAGTACACAGTGACCGTCGACTACTGGAGCTTCGGCACCCTGGCCTTTGAGTGCATCACGGGCTTCCGGCCCTT  665
            ||||||||.||||||||.|||||||||||||||||||||||||||||.|||||||||||.||||||||||||||
Sbjct  592  AAGTACACCGTGACCGTTGACTACTGGAGCTTCGGCACCCTGGCCTTCGAGTGCATCACTGGCTTCCGGCCCTT  665

Query  666  CCTCCCCAACTGGCAGCCCGTGCAGTGGCATTCAAAAGTGCGGCAGAAGAGTGAGGTGGACATTGTTGTTAGCG  739
            ||||||.|||||||||||.|||||||||||.||.|||||.|||||||||||.||.||||||||.||||||||.|
Sbjct  666  CCTCCCTAACTGGCAGCCTGTGCAGTGGCACTCCAAAGTCCGGCAGAAGAGCGAAGTGGACATCGTTGTTAGTG  739

Query  740  AAGACTTGAATGGAACGGTGAAGTTTTCAAGCTCTTTACCCTACCCCAATAATCTTAACAGTGTCCTGGCTGAG  813
            ||||||||||||||.|.||||||||||||||.||..||||||.||||||||||||||||||||||.|||||||.
Sbjct  740  AAGACTTGAATGGAGCAGTGAAGTTTTCAAGTTCGCTACCCTTCCCCAATAATCTTAACAGTGTCTTGGCTGAA  813

Query  814  CGACTGGAGAAGTGGCTGCAACTGATGCTGATGTGGCACCCCCGACAGAGGGGCACGGATCCCACGTATGGGCC  887
            ||.|||||||||||||||||.||||||||.|||||||||||.||.||.|||||||||||||||..||||||.||
Sbjct  814  CGGCTGGAGAAGTGGCTGCAGCTGATGCTTATGTGGCACCCTCGGCAAAGGGGCACGGATCCCCAGTATGGCCC  887

Query  888  CAATGGCTGCTTCAAGGCCCTGGATGACATCTTAAACTTAAAGCTGGTTCATATCTTGAACATGGTCACGGGCA  961
            |||.||||||||||..|||||||||||||||||.|||||.||||||||||||.||||||||||||||||.||||
Sbjct  888  CAACGGCTGCTTCAGAGCCCTGGATGACATCTTGAACTTGAAGCTGGTTCATGTCTTGAACATGGTCACAGGCA  961

Query  962  CCATCCACACCTACCCTGTGACAGAGGATGAGAGTCTGCAGAGCTTGAAGGCCAGAATCCAACAGGACACGGGC  1035
            ||.|.|||||.|||||.|||||.|||||||||||||||||||||||.||..||||||||||..|.||||||||.
Sbjct  962  CCGTTCACACATACCCCGTGACGGAGGATGAGAGTCTGCAGAGCTTAAAAACCAGAATCCAGGAAGACACGGGG  1035

Query 1036  ATCCCAGAGGAGGACCAGGAGCTGCTGCAGGAAGCGGGCCTGGCGTTGATCCCCGATAAGCCTGCCACTCAGTG  1109
            ||||..|||...|||||||||||||||||.||.||.||.||||.|.||.||||.||.||||||||.||||||||
Sbjct 1036  ATCCTGGAGACAGACCAGGAGCTGCTGCAAGAGGCAGGGCTGGTGCTGCTCCCTGACAAGCCTGCTACTCAGTG  1109

Query 1110  TATTTCAGACGGCAAG----GTGAGCCCTGGCTTCGTAC-----ACA-CCATCCTGTTTACCTTGGCTGTGCCT  1173
            .||.||||||.|||||    ..|||    |||.||  ||     ||| ..|||.|||||   ||..||.||.|.
Sbjct 1110  CATCTCAGACAGCAAGACAAACGAG----GGCCTC--ACGTTGGACATGGATCTTGTTT---TTCTCTTTGACA  1174

Query 1174  CCTGGGAAACTCAAC----ACACTTTCAGATTTC------------------AATTCTGCTTTGTCA--TGTAG  1223
            .| .|.|||.|||||    |.||  ||||||..|                  ||       .|||||  ||||.
Sbjct 1175  AC-AGTAAAATCAACTATGAGAC--TCAGATCACCCCCCGACCCCAACCGGAAA-------GTGTCAGCTGTAT  1238

Query 1224  TCTGTTAATCA----CACAGTGCGGATACCTGGCTGGTTTT---------------------------------  1260
            .||     |||    |.|| .||||| ||||  ||..||.|                                 
Sbjct 1239  CCT-----TCAGGAGCCCA-AGCGGA-ACCT--CTCCTTCTTCCAGCTGAGGAAAGTGTGGGGCCAAGTCTGGC  1303

Query 1261  --------------------------------------------------------------------------  1260
                                                                                      
Sbjct 1304  ACAGCATCCAGACGCTGAAGGAAGACTGTAACCGGCTGCAGCAGGGACAGCGAGCAGCCATGATGAGTCTCCTC  1377

Query 1261  --------------------------------------------------------------------------  1260
                                                                                      
Sbjct 1378  CGGAATAACAGCTGCCTCTCTAAGATGAAGAACGCCATGGCCTCCACGGCCCAGCAGCTCAAGGCCAAGCTGGA  1451

Query 1261  --------------------------------------------------------------------------  1260
                                                                                      
Sbjct 1452  CTTCTTCAAAACCAGCATCCAGATCGACCTGGAGAAGTATAAAGAGCAGACCGAGTTTGGGATCACCTCAGATA  1525

Query 1261  --------------------------------------------------------------------------  1260
                                                                                      
Sbjct 1526  AATTGCTGCTGGCTTGGCGGGAGATGGAGCAGGCTGTGGAGCAGTGTGGGCGGGATGCCCTCTGTCCATCAGGT  1599

Query 1261  ------------------------------  1260
                                          
Sbjct 1600  GGCATGAGCACAGCTTTCCCATCAGGAGAA  1629

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